RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 SLC3A2P08195 630 aaKnown RBP5.34□□□□□ -1.55
NEAT1-202ENST00000501122 HARSP12081 509 aaKnown RBP5.34□□□□□ -1.55
NEAT1-202ENST00000501122 ZNF75DP51815 510 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 CCDC93Q567U6 631 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 CCDC62Q6P9F0 684 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 KDM4CQ9H3R0 1056 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 AFAP1Q8N556 730 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 CEP131Q9UPN4 1083 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 FKBP5Q13451 457 aaPredicted RBP5.34□□□□□ -1.55
NEAT1-202ENST00000501122 GATAD2AQ86YP4 633 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 CDHR1Q96JP9 859 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 SAMM50Q9Y512 469 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 TSPY2A6NKD2 308 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 TSPY3P0CV98 308 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 TSPY8P0CW00 308 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 TSPY1Q01534 308 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 ANO6Q4KMQ2 910 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 HOMER3Q9NSC5 361 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 TBL3Q12788 808 aaKnown RBP5.34□□□□□ -1.55
NEAT1-202ENST00000501122 GIMAP4Q9NUV9 329 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 KLHL14Q9P2G3 628 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 DIAPH2O60879 1101 aa5.34□□□□□ -1.56
NEAT1-202ENST00000501122 KRT6AP02538 564 aa5.34□□□□□ -1.56
NEAT1-202ENST00000501122 KRT6BP04259 564 aa5.34□□□□□ -1.56
NEAT1-202ENST00000501122 KRT6CP48668 564 aa5.34□□□□□ -1.56
NEAT1-202ENST00000501122 DNA2P51530 1060 aa5.34□□□□□ -1.56
NEAT1-202ENST00000501122 OGFOD1Q8N543 542 aa5.34□□□□□ -1.56
NEAT1-202ENST00000501122 NRDE2Q9H7Z3 1164 aa5.34□□□□□ -1.56
NEAT1-202ENST00000501122 SYF2O95926 243 aaKnown RBP5.34□□□□□ -1.56
NEAT1-202ENST00000501122 STX3Q13277 289 aa5.34□□□□□ -1.56
NEAT1-202ENST00000501122 HIBCHQ6NVY1 386 aaPredicted RBP5.34□□□□□ -1.56
NEAT1-202ENST00000501122 PDHA1P08559 390 aa5.34□□□□□ -1.56
NEAT1-202ENST00000501122 MYBPC2Q14324 1141 aa5.34□□□□□ -1.56
NEAT1-202ENST00000501122 FMNL1O95466 1100 aaPredicted RBP5.34□□□□□ -1.56
NEAT1-202ENST00000501122 ARL1P40616 181 aaPredicted RBP5.34□□□□□ -1.56
NEAT1-202ENST00000501122 PCDHGA3Q9Y5H0 932 aa5.34□□□□□ -1.56
NEAT1-202ENST00000501122 SUGP1Q8IWZ8 645 aaKnown RBP5.34□□□□□ -1.56
NEAT1-202ENST00000501122 DDHD2O94830 711 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 ATP11CQ8NB49 1132 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 EFHD2Q96C19 240 aaPredicted RBP5.33□□□□□ -1.56
NEAT1-202ENST00000501122 IMPACTQ9P2X3 320 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 WRNQ14191 1432 aaPredicted RBP eCLIP5.33□□□□□ -1.56
NEAT1-202ENST00000501122 BIRC3Q13489 604 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 RCN1Q15293 331 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 SYNCQ9H7C4 482 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 MUM1L1Q5H9M0 696 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 FAM204AQ9H8W3 233 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 APAF1O14727 1248 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 ABL2P42684 1182 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 LMNB2Q03252 620 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 FAM133BQ5BKY9 247 aaKnown RBP5.33□□□□□ -1.56
NEAT1-202ENST00000501122 CROCCP2Q86T23 111 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 CTAGE1Q96RT6 745 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 NACA2Q9H009 215 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 CARD9Q9H257 536 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 GDPD2Q9HCC8 539 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 CHMP2BQ9UQN3 213 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 ARPC4-TTLL3A0A0A6YYG9 625 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 CORO7P57737 925 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 RPGRQ92834 1020 aaKnown RBP5.33□□□□□ -1.56
NEAT1-202ENST00000501122 CFAP36Q96G28 342 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 CHGBP05060 677 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 NOP2P46087 812 aaKnown RBP5.33□□□□□ -1.56
NEAT1-202ENST00000501122 NFRKBQ6P4R8 1299 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 KIF6Q6ZMV9 814 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 SGSM3Q96HU1 749 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 KDM2BQ8NHM5 1336 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 MFN1Q8IWA4 741 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 ZBED2Q9BTP6 218 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 PLEKHA4Q9H4M7 779 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 CEP78Q5JTW2 689 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 MTMR7Q9Y216 660 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 ANO5Q75V66 913 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 TEKT4Q8WW24 435 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 THUMPD2Q9BTF0 503 aaKnown RBP5.33□□□□□ -1.56
NEAT1-202ENST00000501122 LMNAP02545 664 aaKnown RBP5.33□□□□□ -1.56
NEAT1-202ENST00000501122 EEF1DP29692 281 aaKnown RBP5.33□□□□□ -1.56
NEAT1-202ENST00000501122 TRPC3Q13507 836 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 OSBPL1AQ9BXW6 950 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 CCPG1Q9ULG6 757 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 KRT8P05787 483 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 KCNA1Q09470 495 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 TRIML2Q8N7C3 387 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 DYDC2Q96IM9 177 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.33□□□□□ -1.567e-47■■□□□ 13
NEAT1-202ENST00000501122 GCC1Q96CN9 775 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 TSPAN18Q96SJ8 248 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 MAK16Q9BXY0 300 aaKnown RBP5.33□□□□□ -1.56
NEAT1-202ENST00000501122 FAM129AQ9BZQ8 928 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 RAP1GDS1P52306 607 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 MLECQ14165 292 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 IQCDQ96DY2 449 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 OMA1Q96E52 524 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 MAML3Q96JK9 1138 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 OLFM3Q96PB7 478 aa5.33□□□□□ -1.56
NEAT1-202ENST00000501122 LARP6Q9BRS8 491 aaKnown RBP5.32□□□□□ -1.56
NEAT1-202ENST00000501122 TSGA10Q9BZW7 698 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 LCA5LO95447 670 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 FAM167BQ9BTA0 163 aa5.32□□□□□ -1.56
NEAT1-202ENST00000501122 VPS37BQ9H9H4 285 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms