RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 KAZALD1Q96I82 304 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 PLA2G12BQ9BX93 195 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 TOR4AQ9NXH8 423 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 SH3TC1Q8TE82 1336 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 ANKRD18BA2A2Z9 1011 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 HIP1O00291 1037 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 IRS4O14654 1257 aaPredicted RBP8.47□□□□□ -1.05
MED28-202ENST00000499786 CIAO1O76071 339 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 CTSWP56202 376 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 FOXO4P98177 505 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 PTPN12Q05209 780 aaKnown RBP8.47□□□□□ -1.05
MED28-202ENST00000499786 HLFQ16534 295 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 INTS5Q6P9B9 1019 aaKnown RBP8.47□□□□□ -1.05
MED28-202ENST00000499786 FAM196AQ6ZSG2 479 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 KRT27Q7Z3Y8 459 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 ZBTB33Q86T24 672 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 LINC00116Q8NCU8 138 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 RUFY2Q8WXA3 655 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 UTP14AQ9BVJ6 771 aaKnown RBP8.47□□□□□ -1.05
MED28-202ENST00000499786 DIAPH3Q9NSV4 1193 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 MAP4K5Q9Y4K4 846 aa8.47□□□□□ -1.05
MED28-202ENST00000499786 ZNF609O15014 1411 aa8.46□□□□□ -1.05
MED28-202ENST00000499786 C4BP0C0L5 1744 aa8.46□□□□□ -1.05
MED28-202ENST00000499786 TAF1LQ8IZX4 1826 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 EYA2O00167 538 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 NPHP1O15259 732 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 PDE8AO60658 829 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 CAMTA2O94983 1202 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 GRM5P41594 1212 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 RFX5P48382 616 aaPredicted RBP8.46□□□□□ -1.06
MED28-202ENST00000499786 RBM25P49756 843 aaKnown RBP8.46□□□□□ -1.06
MED28-202ENST00000499786 MCCD1P59942 119 aaPredicted RBP8.46□□□□□ -1.06
MED28-202ENST00000499786 FOXC1Q12948 553 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 TNNI3KQ59H18 835 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 CLEC4GQ6UXB4 293 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 KLHDC4Q8TBB5 520 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 FAM89AQ96GI7 184 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 NIP7Q9Y221 180 aaKnown RBP eCLIP8.46□□□□□ -1.06
MED28-202ENST00000499786 AKAP2Q9Y2D5 859 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 RTCBQ9Y3I0 505 aaKnown RBP8.46□□□□□ -1.06
MED28-202ENST00000499786 FPGT-TNNI3KV9GXZ4 949 aa8.46□□□□□ -1.06
MED28-202ENST00000499786 MYH14Q7Z406 1995 aaKnown RBP8.46□□□□□ -1.06
MED28-202ENST00000499786 LRP5O75197 1615 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 SASH1O94885 1247 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 GTF2E1P29083 439 aaPredicted RBP8.45□□□□□ -1.06
MED28-202ENST00000499786 SOX11P35716 441 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 RBM6P78332 1123 aaKnown RBP8.45□□□□□ -1.06
MED28-202ENST00000499786 TFCP2Q12800 502 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 CCDC152Q4G0S7 254 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 KIAA1211Q6ZU35 1233 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 ZNF34Q8IZ26 560 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 SNIP1Q8TAD8 396 aaKnown RBP8.45□□□□□ -1.06
MED28-202ENST00000499786 PI4K2BQ8TCG2 481 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 EVI5LQ96CN4 794 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 NYXQ9GZU5 481 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 CCDC8Q9H0W5 538 aaPredicted RBP8.45□□□□□ -1.06
MED28-202ENST00000499786 GPR108Q9NPR9 543 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 CEP126Q9P2H0 1117 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 UBN2Q6ZU65 1347 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 RFX7Q2KHR2 1363 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 BRWD3Q6RI45 1802 aa8.45□□□□□ -1.06
MED28-202ENST00000499786 FAM177BA6PVY3 158 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 ESPNB1AK53 854 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 RPS6KA4O75676 772 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 MAP4K4O95819 1239 aaPredicted RBP8.44□□□□□ -1.06
MED28-202ENST00000499786 ITGA6P23229 1130 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 LRRFIP1Q32MZ4 808 aaKnown RBP8.44□□□□□ -1.06
MED28-202ENST00000499786 METTL24Q5JXM2 366 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 FAM182BQ5T319 152 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 GORABQ5T7V8 394 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 PHTF2Q8N3S3 785 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 ESYT1Q9BSJ8 1104 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 FSD1Q9BTV5 496 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 ANO2Q9NQ90 1003 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 CNNM1Q9NRU3 951 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 TLL2Q9Y6L7 1015 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 RAD50Q92878 1312 aa8.44□□□□□ -1.06
MED28-202ENST00000499786 COL24A1Q17RW2 1714 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 SPEF2Q9C093 1822 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 TNFRSF10AO00220 468 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 EPB41L2O43491 1005 aaKnown RBP8.43□□□□□ -1.06
MED28-202ENST00000499786 CHMLP26374 656 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 RFC4P35249 363 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 IGHMBP2P38935 993 aaKnown RBP8.43□□□□□ -1.06
MED28-202ENST00000499786 RABEP1Q15276 862 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 SLC27A3Q5K4L6 730 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 CCDC158Q5M9N0 1113 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 EAF2Q96CJ1 260 aaPredicted RBP8.43□□□□□ -1.06
MED28-202ENST00000499786 NEUROD6Q96NK8 337 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 CCDC85AQ96PX6 553 aaPredicted RBP8.43□□□□□ -1.06
MED28-202ENST00000499786 CDC5LQ99459 802 aaKnown RBP8.43□□□□□ -1.06
MED28-202ENST00000499786 NARFQ9UHQ1 456 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 CDV3Q9UKY7 258 aaKnown RBP8.43□□□□□ -1.06
MED28-202ENST00000499786 ABCC12Q96J65 1359 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 C4AP0C0L4 1744 aa8.43□□□□□ -1.06
MED28-202ENST00000499786 DDX60Q8IY21 1712 aaKnown RBP8.43□□□□□ -1.06
MED28-202ENST00000499786 NTSR2O95665 410 aa8.42□□□□□ -1.06
MED28-202ENST00000499786 CSF1RP07333 972 aa8.42□□□□□ -1.06
MED28-202ENST00000499786 HSP90AA1P07900 732 aaKnown RBP8.42□□□□□ -1.06
MED28-202ENST00000499786 ATP5JP18859 108 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms