RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 GNRH1P01148 92 aa11.55□□□□□ -0.56
CCDC171-209ENST00000498725 INPP5BP32019 993 aa11.55□□□□□ -0.56
CCDC171-209ENST00000498725 PRMT2P55345 433 aa11.55□□□□□ -0.56
CCDC171-209ENST00000498725 UBE4AQ14139 1066 aa11.55□□□□□ -0.56
CCDC171-209ENST00000498725 SLC4A10Q6U841 1118 aa11.55□□□□□ -0.56
CCDC171-209ENST00000498725 C17orf99Q6UX52 265 aa11.55□□□□□ -0.56
CCDC171-209ENST00000498725 C9orf78Q9NZ63 289 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-209ENST00000498725 NR2E3Q9Y5X4 410 aa11.55□□□□□ -0.56
CCDC171-209ENST00000498725 GRM8O00222 908 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 HOXD10P28358 340 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 GJA8P48165 433 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 UBXN2AP68543 259 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 PRKCZQ05513 592 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 BEND3Q5T5X7 828 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 DCAF15Q66K64 600 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 NKX2-3Q8TAU0 364 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 LRCH3Q96II8 777 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 UNC93B1Q9H1C4 597 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 GABRQQ9UN88 632 aa11.54□□□□□ -0.56
CCDC171-209ENST00000498725 SZT2Q5T011 3432 aa11.53□□□□□ -0.56
CCDC171-209ENST00000498725 SOX1O00570 391 aaPredicted RBP11.53□□□□□ -0.56
CCDC171-209ENST00000498725 ZBTB7BO15156 539 aaPredicted RBP11.53□□□□□ -0.56
CCDC171-209ENST00000498725 FARP2O94887 1054 aaPredicted RBP11.53□□□□□ -0.56
CCDC171-209ENST00000498725 GJB1P08034 283 aa11.53□□□□□ -0.56
CCDC171-209ENST00000498725 EXOSC9Q06265 439 aaKnown RBP11.53□□□□□ -0.56
CCDC171-209ENST00000498725 TCP10Q12799 353 aa11.53□□□□□ -0.56
CCDC171-209ENST00000498725 U2AF1L4Q8WU68 220 aaKnown RBP11.53□□□□□ -0.56
CCDC171-209ENST00000498725 ZNF341Q9BYN7 854 aa11.53□□□□□ -0.56
CCDC171-209ENST00000498725 ZCCHC17Q9NP64 241 aaKnown RBP11.53□□□□□ -0.56
CCDC171-209ENST00000498725 TAOK2Q9UL54 1235 aa11.53□□□□□ -0.56
CCDC171-209ENST00000498725 FANCIQ9NVI1 1328 aa11.53□□□□□ -0.56
CCDC171-209ENST00000498725 DOCK2Q92608 1830 aa11.53□□□□□ -0.56
CCDC171-209ENST00000498725 EVI5O60447 810 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 TFRCP02786 760 aaKnown RBP11.52□□□□□ -0.57
CCDC171-209ENST00000498725 CYP2C8P10632 490 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 ELNP15502 786 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 BCAMP50895 628 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 PPATQ06203 517 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 LRRC24Q50LG9 513 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 CAVIN4Q5BKX8 364 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 METTL24Q5JXM2 366 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 ANKRD23Q86SG2 305 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 HOOK2Q96ED9 719 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 SUCLG2Q96I99 432 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 STAP2Q9UGK3 403 aa11.52□□□□□ -0.57
CCDC171-209ENST00000498725 ADCY3O60266 1144 aa11.51□□□□□ -0.57
CCDC171-209ENST00000498725 VAMP4O75379 141 aa11.51□□□□□ -0.57
CCDC171-209ENST00000498725 FCGRTP55899 365 aa11.51□□□□□ -0.57
CCDC171-209ENST00000498725 HDLBPQ00341 1268 aaKnown RBP11.51□□□□□ -0.57
CCDC171-209ENST00000498725 CCDC184Q52MB2 194 aa11.51□□□□□ -0.57
CCDC171-209ENST00000498725 APOBEC3HQ6NTF7 200 aaKnown RBP11.51□□□□□ -0.57
CCDC171-209ENST00000498725 FBXO33Q7Z6M2 555 aa11.51□□□□□ -0.57
CCDC171-209ENST00000498725 UBE2Q1Q7Z7E8 422 aa11.51□□□□□ -0.57
CCDC171-209ENST00000498725 FAM83AQ86UY5 434 aa11.51□□□□□ -0.57
CCDC171-209ENST00000498725 TBC1D22AQ8WUA7 517 aa11.51□□□□□ -0.57
CCDC171-209ENST00000498725 ZDHHC15Q96MV8 337 aa11.51□□□□□ -0.57
CCDC171-209ENST00000498725 ADGRA2Q96PE1 1338 aa11.51□□□□□ -0.57
CCDC171-209ENST00000498725 ZBTB22O15209 634 aa11.5□□□□□ -0.57
CCDC171-209ENST00000498725 GADL1Q6ZQY3 521 aa11.5□□□□□ -0.57
CCDC171-209ENST00000498725 KLHDC4Q8TBB5 520 aa11.5□□□□□ -0.57
CCDC171-209ENST00000498725 DEFB118Q96PH6 123 aa11.5□□□□□ -0.57
CCDC171-209ENST00000498725 PRO3102Q9H379 93 aa11.5□□□□□ -0.57
CCDC171-209ENST00000498725 MROH5Q6ZUA9 1318 aa11.5□□□□□ -0.57
CCDC171-209ENST00000498725 PTPRFP10586 1907 aa11.5□□□□□ -0.57
CCDC171-209ENST00000498725 SGPL1O95470 568 aa11.49□□□□□ -0.57
CCDC171-209ENST00000498725 ZEB1P37275 1124 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-209ENST00000498725 MOGSQ13724 837 aa11.49□□□□□ -0.57
CCDC171-209ENST00000498725 SLAIN1Q8ND83 568 aa11.49□□□□□ -0.57
CCDC171-209ENST00000498725 FAM151AQ8WW52 585 aa11.49□□□□□ -0.57
CCDC171-209ENST00000498725 PARK7Q99497 189 aaKnown RBP11.49□□□□□ -0.57
CCDC171-209ENST00000498725 SRCIN1Q9C0H9 1055 aa11.49□□□□□ -0.57
CCDC171-209ENST00000498725 BICC1Q9H694 974 aaKnown RBP11.49□□□□□ -0.57
CCDC171-209ENST00000498725 KCNH4Q9UQ05 1017 aa11.49□□□□□ -0.57
CCDC171-209ENST00000498725 MAST3O60307 1309 aa11.49□□□□□ -0.57
CCDC171-209ENST00000498725 DOCK1Q14185 1865 aa11.49□□□□□ -0.57
CCDC171-209ENST00000498725 MYH2Q9UKX2 1941 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 INHAP05111 366 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 NBPF7P0C2Y1 421 aaPredicted RBP11.48□□□□□ -0.57
CCDC171-209ENST00000498725 BCRP11274 1271 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 FLT3LGP49771 235 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 DIXDC1Q155Q3 683 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 CCDC27Q2M243 656 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 FKBP1CQ5VVH2 108 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 GPAT2Q6NUI2 795 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 C7orf61Q8IZ16 206 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 KAZALD1Q96I82 304 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 PAWRQ96IZ0 340 aaKnown RBP11.48□□□□□ -0.57
CCDC171-209ENST00000498725 ZMYND8Q9ULU4 1186 aaPredicted RBP11.48□□□□□ -0.57
CCDC171-209ENST00000498725 IL16Q14005 1332 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 RPAP1Q9BWH6 1393 aaPredicted RBP11.48□□□□□ -0.57
CCDC171-209ENST00000498725 PHIPQ8WWQ0 1821 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 DOCK3Q8IZD9 2030 aa11.48□□□□□ -0.57
CCDC171-209ENST00000498725 TNPO2O14787 897 aaKnown RBP11.47□□□□□ -0.57
CCDC171-209ENST00000498725 ALDH1L1O75891 902 aa11.47□□□□□ -0.57
CCDC171-209ENST00000498725 PDE8BO95263 885 aa11.47□□□□□ -0.57
CCDC171-209ENST00000498725 NFIAQ12857 509 aa11.47□□□□□ -0.57
CCDC171-209ENST00000498725 CDC42EP5Q6NZY7 148 aa11.47□□□□□ -0.57
CCDC171-209ENST00000498725 HHIPL2Q6UWX4 724 aa11.47□□□□□ -0.57
CCDC171-209ENST00000498725 Q7L0L9 218 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms