RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 CHGBP05060 677 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 CALRP27797 417 aaKnown RBP10.48□□□□□ -0.73
FN1-227ENST00000498719 KCNJ4P48050 445 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 RACK1P63244 317 aaKnown RBP10.48□□□□□ -0.73
FN1-227ENST00000498719 CTDSPL2Q05D32 466 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 GNL2Q13823 731 aaKnown RBP10.48□□□□□ -0.73
FN1-227ENST00000498719 USP17L2Q6R6M4 530 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 COPS6Q7L5N1 327 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 USP17L1Q7RTZ2 530 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 XAGE3Q8WTP9 111 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 MRFAP1L1Q96HT8 127 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 ZSWIM6Q9HCJ5 1215 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 INPP5FQ9Y2H2 1132 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 TRPM3Q9HCF6 1732 aaPredicted RBP10.48□□□□□ -0.73
FN1-227ENST00000498719 GOLGA6CA6NDK9 693 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 GOLGA6BA6NDN3 693 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 DDX58O95786 925 aaKnown RBP10.47□□□□□ -0.73
FN1-227ENST00000498719 GOLGA6DP0CG33 693 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 DNM1Q05193 864 aaKnown RBP10.47□□□□□ -0.73
FN1-227ENST00000498719 C10orf62Q5T681 223 aaPredicted RBP10.47□□□□□ -0.73
FN1-227ENST00000498719 VPS53Q5VIR6 699 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 CREB3L3Q68CJ9 461 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 ZNF496Q96IT1 587 aaPredicted RBP10.47□□□□□ -0.73
FN1-227ENST00000498719 MYD88Q99836 296 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 GOLGA6AQ9NYA3 693 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 PARP2Q9UGN5 583 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 CYP46A1Q9Y6A2 500 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 UTYO14607 1347 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 KDM6AO15550 1401 aaPredicted RBP10.47□□□□□ -0.73
FN1-227ENST00000498719 ZNF142P52746 1687 aaPredicted RBP10.47□□□□□ -0.73
FN1-227ENST00000498719 NEURL1BA8MQ27 555 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 IFRD1O00458 451 aaPredicted RBP10.47□□□□□ -0.73
FN1-227ENST00000498719 ZNF76P36508 570 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 PTK7Q13308 1070 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 ZNF589Q86UQ0 364 aaPredicted RBP10.47□□□□□ -0.73
FN1-227ENST00000498719 POTEDQ86YR6 584 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 SYAP1Q96A49 352 aaPredicted RBP10.47□□□□□ -0.73
FN1-227ENST00000498719 SLC52A2Q9HAB3 445 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 TPCN1Q9ULQ1 816 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 USP16Q9Y5T5 823 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 OVOS2A0A0G2JMS6 1433 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 CAMTA1Q9Y6Y1 1673 aa10.47□□□□□ -0.73
FN1-227ENST00000498719 VPS37CA5D8V6 355 aaPredicted RBP10.46□□□□□ -0.73
FN1-227ENST00000498719 FGRP09769 529 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 POU5F1Q01860 360 aaKnown RBP10.46□□□□□ -0.73
FN1-227ENST00000498719 GCKRQ14397 625 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 COL19A1Q14993 1142 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 HS1BP3Q53T59 392 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 ZSCAN29Q8IWY8 852 aaPredicted RBP10.46□□□□□ -0.73
FN1-227ENST00000498719 PGBD3Q8N328 593 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 ATL2Q8NHH9 583 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 RAPGEF4Q8WZA2 1011 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 MAP4K1Q92918 833 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 APBA2Q99767 749 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 FSD1Q9BTV5 496 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 GEMIN8Q9NWZ8 242 aaKnown RBP10.46□□□□□ -0.73
FN1-227ENST00000498719 MTMR6Q9Y217 621 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 FRMD4BQ9Y2L6 1034 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 NPHP3Q7Z494 1330 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 NPHP4O75161 1426 aaPredicted RBP10.46□□□□□ -0.73
FN1-227ENST00000498719 SCN11AQ9UI33 1791 aa10.46□□□□□ -0.73
FN1-227ENST00000498719 FAM196BA6NMK8 535 aa10.46□□□□□ -0.74
FN1-227ENST00000498719 SLC27A2O14975 620 aa10.46□□□□□ -0.74
FN1-227ENST00000498719 OFD1O75665 1012 aa10.46□□□□□ -0.74
FN1-227ENST00000498719 ZKSCAN1P17029 563 aaPredicted RBP10.46□□□□□ -0.74
FN1-227ENST00000498719 FAM173BQ6P4H8 233 aa10.46□□□□□ -0.74
FN1-227ENST00000498719 RGL4Q8IZJ4 473 aa10.46□□□□□ -0.74
FN1-227ENST00000498719 PRPF38AQ8NAV1 312 aaKnown RBP10.46□□□□□ -0.74
FN1-227ENST00000498719 NAP1L4Q99733 375 aaKnown RBP10.46□□□□□ -0.74
FN1-227ENST00000498719 CASS4Q9NQ75 786 aa10.46□□□□□ -0.74
FN1-227ENST00000498719 ZKSCAN5Q9Y2L8 839 aa10.46□□□□□ -0.74
FN1-227ENST00000498719 ADAMTS7Q9UKP4 1686 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 NRDCO43847 1150 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 LDHCP07864 332 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 CHRNA2Q15822 529 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 PLEKHG4Q58EX7 1191 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 SOGA3Q5TF21 947 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 LARP1Q6PKG0 1096 aaKnown RBP10.45□□□□□ -0.74
FN1-227ENST00000498719 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.45□□□□□ -0.74
FN1-227ENST00000498719 MEGF6O75095 1541 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 ATP5J2-PTCD1G3V325 749 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 PTCD1O75127 700 aaKnown RBP10.45□□□□□ -0.74
FN1-227ENST00000498719 HCLS1P14317 486 aaPredicted RBP10.45□□□□□ -0.74
FN1-227ENST00000498719 PHKG2P15735 406 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 NEXNQ0ZGT2 675 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 TUSC1Q2TAM9 212 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 TM6SF1Q9BZW5 370 aa10.45□□□□□ -0.74
FN1-227ENST00000498719 UBE2HP62256 183 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 LRRC41Q15345 812 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 DIXDC1Q155Q3 683 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 CCDC183Q5T5S1 534 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 UBE3BQ7Z3V4 1068 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 LRP10Q7Z4F1 713 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 ZNF579Q8NAF0 562 aaKnown RBP10.44□□□□□ -0.74
FN1-227ENST00000498719 LRRN4Q8WUT4 740 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 METTL22Q9BUU2 404 aaPredicted RBP10.44□□□□□ -0.74
FN1-227ENST00000498719 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.44□□□□□ -0.74
FN1-227ENST00000498719 METTL5Q9NRN9 209 aaKnown RBP10.44□□□□□ -0.74
FN1-227ENST00000498719 USP25Q9UHP3 1055 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 HDAC5Q9UQL6 1122 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms