RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 SNCAIPQ9Y6H5 919 aa13.72□□□□□ -0.21
LSAMP-206ENST00000498645 SPDYE5A6NIY4 337 aa13.71□□□□□ -0.21
LSAMP-206ENST00000498645 SP3Q02447 781 aa13.71□□□□□ -0.21
LSAMP-206ENST00000498645 CDC42EP5Q6NZY7 148 aa13.71□□□□□ -0.21
LSAMP-206ENST00000498645 FAM43AQ8N2R8 423 aa13.71□□□□□ -0.21
LSAMP-206ENST00000498645 FRAT1Q92837 279 aaPredicted RBP13.71□□□□□ -0.21
LSAMP-206ENST00000498645 DENND2AQ9ULE3 1009 aa13.71□□□□□ -0.21
LSAMP-206ENST00000498645 CENPFP49454 3210 aa13.71□□□□□ -0.22
LSAMP-206ENST00000498645 RPAP1Q9BWH6 1393 aaPredicted RBP13.71□□□□□ -0.22
LSAMP-206ENST00000498645 DOCK2Q92608 1830 aa13.7□□□□□ -0.22
LSAMP-206ENST00000498645 SRGAP3O43295 1099 aa13.7□□□□□ -0.22
LSAMP-206ENST00000498645 GNAI3P08754 354 aa13.7□□□□□ -0.22
LSAMP-206ENST00000498645 FKBP1CQ5VVH2 108 aa13.7□□□□□ -0.22
LSAMP-206ENST00000498645 ZNF341Q9BYN7 854 aa13.7□□□□□ -0.22
LSAMP-206ENST00000498645 EFCC1Q9HA90 598 aa13.7□□□□□ -0.22
LSAMP-206ENST00000498645 ZFYVE28Q9HCC9 887 aa13.7□□□□□ -0.22
LSAMP-206ENST00000498645 COPRSQ9NQ92 184 aa13.7□□□□□ -0.22
LSAMP-206ENST00000498645 USP40Q9NVE5 1235 aa13.7□□□□□ -0.22
LSAMP-206ENST00000498645 ZSWIM8A7E2V4 1837 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 IRF6O14896 467 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 SEMA3EO15041 775 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 CETPP11597 493 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 INPP5BP32019 993 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 TIMM10P62072 90 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 NFIAQ12857 509 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 CCDC102BQ68D86 513 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 INTS3Q68E01 1043 aaKnown RBP13.69□□□□□ -0.22
LSAMP-206ENST00000498645 ERO1BQ86YB8 467 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 DZIP1Q86YF9 867 aaKnown RBP13.69□□□□□ -0.22
LSAMP-206ENST00000498645 FAM151AQ8WW52 585 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 ABCF2Q9UG63 623 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 TNNQ9UQP3 1299 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 PTPN22Q9Y2R2 807 aa13.69□□□□□ -0.22
LSAMP-206ENST00000498645 SALL1Q9NSC2 1324 aa13.68□□□□□ -0.22
LSAMP-206ENST00000498645 WDHD1O75717 1129 aaPredicted RBP13.68□□□□□ -0.22
LSAMP-206ENST00000498645 BCAR3O75815 825 aa13.68□□□□□ -0.22
LSAMP-206ENST00000498645 ECM2O94769 699 aaPredicted RBP13.68□□□□□ -0.22
LSAMP-206ENST00000498645 CAP1Q01518 475 aa13.68□□□□□ -0.22
LSAMP-206ENST00000498645 TFCP2Q12800 502 aa13.68□□□□□ -0.22
LSAMP-206ENST00000498645 PPIL2Q13356 520 aa13.68□□□□□ -0.22
LSAMP-206ENST00000498645 SNAPC2Q13487 334 aa13.68□□□□□ -0.22
LSAMP-206ENST00000498645 RASGRF1Q13972 1273 aa13.68□□□□□ -0.22
LSAMP-206ENST00000498645 ARHGAP45Q92619 1136 aa13.68□□□□□ -0.22
LSAMP-206ENST00000498645 A0A1B0GUL7 405 aa13.67□□□□□ -0.22
LSAMP-206ENST00000498645 IPO8O15397 1037 aaKnown RBP13.67□□□□□ -0.22
LSAMP-206ENST00000498645 TRIM27P14373 513 aa13.67□□□□□ -0.22
LSAMP-206ENST00000498645 ZGPATQ8N5A5 531 aaKnown RBP13.67□□□□□ -0.22
LSAMP-206ENST00000498645 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.67□□□□□ -0.22
LSAMP-206ENST00000498645 XAGE2Q96GT9 111 aa13.67□□□□□ -0.22
LSAMP-206ENST00000498645 NEUROD6Q96NK8 337 aa13.67□□□□□ -0.22
LSAMP-206ENST00000498645 FAM198AQ9UFP1 575 aa13.67□□□□□ -0.22
LSAMP-206ENST00000498645 AKAP2Q9Y2D5 859 aa13.67□□□□□ -0.22
LSAMP-206ENST00000498645 KIAA0100Q14667 2235 aaKnown RBP13.67□□□□□ -0.22
LSAMP-206ENST00000498645 BTBD19C9JJ37 291 aa13.66□□□□□ -0.22
LSAMP-206ENST00000498645 RGS3P49796 1198 aa13.66□□□□□ -0.22
LSAMP-206ENST00000498645 PPATQ06203 517 aa13.66□□□□□ -0.22
LSAMP-206ENST00000498645 ATF7IPQ6VMQ6 1270 aa13.66□□□□□ -0.22
LSAMP-206ENST00000498645 ZSCAN29Q8IWY8 852 aaPredicted RBP13.66□□□□□ -0.22
LSAMP-206ENST00000498645 ZFPM1Q8IX07 1006 aa13.66□□□□□ -0.22
LSAMP-206ENST00000498645 RBBP6Q7Z6E9 1792 aaKnown RBP13.66□□□□□ -0.22
LSAMP-206ENST00000498645 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
LSAMP-206ENST00000498645 GNAI2P04899 355 aa13.65□□□□□ -0.22
LSAMP-206ENST00000498645 PICALMQ13492 652 aa13.65□□□□□ -0.22
LSAMP-206ENST00000498645 MVPQ14764 893 aaKnown RBP13.65□□□□□ -0.22
LSAMP-206ENST00000498645 KIF22Q14807 665 aa13.65□□□□□ -0.22
LSAMP-206ENST00000498645 ARHGEF6Q15052 776 aa13.65□□□□□ -0.22
LSAMP-206ENST00000498645 GORABQ5T7V8 394 aa13.65□□□□□ -0.22
LSAMP-206ENST00000498645 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.65□□□□□ -0.22
LSAMP-206ENST00000498645 TLR2O60603 784 aa13.64□□□□□ -0.23
LSAMP-206ENST00000498645 MYCP01106 439 aaPredicted RBP13.64□□□□□ -0.23
LSAMP-206ENST00000498645 BTDP43251 543 aa13.64□□□□□ -0.23
LSAMP-206ENST00000498645 MTX1Q13505 466 aa13.64□□□□□ -0.23
LSAMP-206ENST00000498645 SLC9C1Q4G0N8 1177 aa13.64□□□□□ -0.23
LSAMP-206ENST00000498645 SPTY2D1Q68D10 685 aaPredicted RBP13.64□□□□□ -0.23
LSAMP-206ENST00000498645 PI16Q6UXB8 463 aa13.64□□□□□ -0.23
LSAMP-206ENST00000498645 SLF2Q8IX21 1173 aa13.64□□□□□ -0.23
LSAMP-206ENST00000498645 ARHGAP39Q9C0H5 1083 aa13.64□□□□□ -0.23
LSAMP-206ENST00000498645 PTCH2Q9Y6C5 1203 aa13.64□□□□□ -0.23
LSAMP-206ENST00000498645 GAKO14976 1311 aa13.64□□□□□ -0.23
LSAMP-206ENST00000498645 DOCK1Q14185 1865 aa13.63□□□□□ -0.23
LSAMP-206ENST00000498645 PNMA6EA0A0J9YXQ4 647 aa13.63□□□□□ -0.23
LSAMP-206ENST00000498645 PDHXO00330 501 aa13.63□□□□□ -0.23
LSAMP-206ENST00000498645 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
LSAMP-206ENST00000498645 G3BP1Q13283 466 aaKnown RBP eCLIP13.63□□□□□ -0.23
LSAMP-206ENST00000498645 PRPF38BQ5VTL8 546 aaKnown RBP13.63□□□□□ -0.23
LSAMP-206ENST00000498645 ERICH6Q7L0X2 663 aa13.63□□□□□ -0.23
LSAMP-206ENST00000498645 ZCCHC17Q9NP64 241 aaKnown RBP13.63□□□□□ -0.23
LSAMP-206ENST00000498645 CPA4Q9UI42 421 aa13.63□□□□□ -0.23
LSAMP-206ENST00000498645 ZNF112Q9UJU3 913 aa13.63□□□□□ -0.23
LSAMP-206ENST00000498645 MROH7-TTC4A0A0A0MT08 1334 aa13.63□□□□□ -0.23
LSAMP-206ENST00000498645 PDS5AQ29RF7 1337 aaKnown RBP13.63□□□□□ -0.23
LSAMP-206ENST00000498645 MKI67P46013 3256 aaKnown RBP13.62□□□□□ -0.23
LSAMP-206ENST00000498645 RFX7Q2KHR2 1363 aa13.62□□□□□ -0.23
LSAMP-206ENST00000498645 ENTPD3O75355 529 aa13.62□□□□□ -0.23
LSAMP-206ENST00000498645 SLC34A2O95436 690 aa13.62□□□□□ -0.23
LSAMP-206ENST00000498645 LACTBP83111 547 aaPredicted RBP13.62□□□□□ -0.23
LSAMP-206ENST00000498645 MECOMQ03112 1051 aa13.62□□□□□ -0.23
LSAMP-206ENST00000498645 OS9Q13438 667 aaPredicted RBP13.62□□□□□ -0.23
LSAMP-206ENST00000498645 NOL9Q5SY16 702 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms