RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 AK9Q5TCS8 1911 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 H0YGN5 161 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 GNRH1P01148 92 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 FGFR2P21802 821 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 PPATQ06203 517 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 HHIPL2Q6UWX4 724 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 C17orf99Q6UX52 265 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 SHISA4Q96DD7 197 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 ZNF341Q9BYN7 854 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 CPA4Q9UI42 421 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 SUGT1Q9Y2Z0 365 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 TRIOBPQ9H2D6 2365 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 KIF16BQ96L93 1317 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 ADGRA2Q96PE1 1338 aa18.47■□□□□ 0.55
TRAF4-212ENST00000498540 MTFR1Q15390 333 aa18.46■□□□□ 0.55
TRAF4-212ENST00000498540 PUM3Q15397 648 aaKnown RBP18.46■□□□□ 0.55
TRAF4-212ENST00000498540 TRIM47Q96LD4 638 aa18.46■□□□□ 0.55
TRAF4-212ENST00000498540 PDHXO00330 501 aa18.45■□□□□ 0.54
TRAF4-212ENST00000498540 IFIT1P09914 478 aaKnown RBP18.45■□□□□ 0.54
TRAF4-212ENST00000498540 PSMC4P43686 418 aa18.45■□□□□ 0.54
TRAF4-212ENST00000498540 PRMT2P55345 433 aa18.45■□□□□ 0.54
TRAF4-212ENST00000498540 ANKRD23Q86SG2 305 aa18.45■□□□□ 0.54
TRAF4-212ENST00000498540 MRPL50Q8N5N7 158 aaKnown RBP18.45■□□□□ 0.54
TRAF4-212ENST00000498540 TCP10Q12799 353 aa18.44■□□□□ 0.54
TRAF4-212ENST00000498540 MOGSQ13724 837 aa18.44■□□□□ 0.54
TRAF4-212ENST00000498540 DIXDC1Q155Q3 683 aa18.44■□□□□ 0.54
TRAF4-212ENST00000498540 FAM151AQ8WW52 585 aa18.44■□□□□ 0.54
TRAF4-212ENST00000498540 SRRDQ9UH36 339 aa18.44■□□□□ 0.54
TRAF4-212ENST00000498540 ZNF112Q9UJU3 913 aa18.44■□□□□ 0.54
TRAF4-212ENST00000498540 KCNH4Q9UQ05 1017 aa18.44■□□□□ 0.54
TRAF4-212ENST00000498540 DAGLAQ9Y4D2 1042 aa18.44■□□□□ 0.54
TRAF4-212ENST00000498540 MGAMO43451 1857 aa18.43■□□□□ 0.54
TRAF4-212ENST00000498540 OSBPP22059 807 aa18.43■□□□□ 0.54
TRAF4-212ENST00000498540 NFIAQ12857 509 aa18.43■□□□□ 0.54
TRAF4-212ENST00000498540 CDC42EP5Q6NZY7 148 aa18.43■□□□□ 0.54
TRAF4-212ENST00000498540 WDR66Q8TBY9 1149 aa18.43■□□□□ 0.54
TRAF4-212ENST00000498540 USP44Q9H0E7 712 aa18.43■□□□□ 0.54
TRAF4-212ENST00000498540 DOCK2Q92608 1830 aa18.43■□□□□ 0.54
TRAF4-212ENST00000498540 ANP32CO43423 234 aa18.42■□□□□ 0.54
TRAF4-212ENST00000498540 SLC5A1P13866 664 aa18.42■□□□□ 0.54
TRAF4-212ENST00000498540 RFX5P48382 616 aaPredicted RBP18.42■□□□□ 0.54
TRAF4-212ENST00000498540 ZNF521Q96K83 1311 aa18.42■□□□□ 0.54
TRAF4-212ENST00000498540 EYA2O00167 538 aa18.41■□□□□ 0.54
TRAF4-212ENST00000498540 FMNL1O95466 1100 aaPredicted RBP18.41■□□□□ 0.54
TRAF4-212ENST00000498540 PRDX5P30044 214 aa18.41■□□□□ 0.54
TRAF4-212ENST00000498540 GRK4P32298 578 aa18.41■□□□□ 0.54
TRAF4-212ENST00000498540 NOL9Q5SY16 702 aaKnown RBP18.41■□□□□ 0.54
TRAF4-212ENST00000498540 CHRDL2Q6WN34 429 aa18.41■□□□□ 0.54
TRAF4-212ENST00000498540 FAM9BQ8IZU0 186 aa18.41■□□□□ 0.54
TRAF4-212ENST00000498540 RAET1EQ8TD07 263 aa18.41■□□□□ 0.54
TRAF4-212ENST00000498540 LPIN2Q92539 896 aa18.41■□□□□ 0.54
TRAF4-212ENST00000498540 FAM198AQ9UFP1 575 aa18.41■□□□□ 0.54
TRAF4-212ENST00000498540 PTPRCP08575 1304 aa18.41■□□□□ 0.54
TRAF4-212ENST00000498540 MYPNQ86TC9 1320 aa18.41■□□□□ 0.54
TRAF4-212ENST00000498540 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
TRAF4-212ENST00000498540 ATG9AQ7Z3C6 839 aa18.4■□□□□ 0.54
TRAF4-212ENST00000498540 SZT2Q5T011 3432 aa18.4■□□□□ 0.54
TRAF4-212ENST00000498540 PTPRFP10586 1907 aa18.39■□□□□ 0.53
TRAF4-212ENST00000498540 CYP2C8P10632 490 aa18.39■□□□□ 0.53
TRAF4-212ENST00000498540 CCL5P13501 91 aa18.39■□□□□ 0.53
TRAF4-212ENST00000498540 HOXD10P28358 340 aa18.39■□□□□ 0.53
TRAF4-212ENST00000498540 GPAT2Q6NUI2 795 aa18.39■□□□□ 0.53
TRAF4-212ENST00000498540 ZFPM1Q8IX07 1006 aa18.39■□□□□ 0.53
TRAF4-212ENST00000498540 DPF3Q92784 378 aa18.39■□□□□ 0.53
TRAF4-212ENST00000498540 ATRNL1Q5VV63 1379 aa18.39■□□□□ 0.53
TRAF4-212ENST00000498540 MYH2Q9UKX2 1941 aa18.39■□□□□ 0.53
TRAF4-212ENST00000498540 BCRP11274 1271 aa18.38■□□□□ 0.53
TRAF4-212ENST00000498540 GJA8P48165 433 aa18.38■□□□□ 0.53
TRAF4-212ENST00000498540 PRKCZQ05513 592 aa18.38■□□□□ 0.53
TRAF4-212ENST00000498540 UBE2Q1Q7Z7E8 422 aa18.38■□□□□ 0.53
TRAF4-212ENST00000498540 SSH1Q8WYL5 1049 aa18.38■□□□□ 0.53
TRAF4-212ENST00000498540 PARK7Q99497 189 aaKnown RBP18.38■□□□□ 0.53
TRAF4-212ENST00000498540 USP40Q9NVE5 1235 aa18.38■□□□□ 0.53
TRAF4-212ENST00000498540 RANBP2P49792 3224 aaKnown RBP18.37■□□□□ 0.53
TRAF4-212ENST00000498540 LDHBP07195 334 aaKnown RBP18.37■□□□□ 0.53
TRAF4-212ENST00000498540 GJB1P08034 283 aa18.37■□□□□ 0.53
TRAF4-212ENST00000498540 NKX2-3Q8TAU0 364 aa18.37■□□□□ 0.53
TRAF4-212ENST00000498540 RNF208Q9H0X6 261 aa18.37■□□□□ 0.53
TRAF4-212ENST00000498540 SIL1Q9H173 461 aa18.37■□□□□ 0.53
TRAF4-212ENST00000498540 RBM27Q9P2N5 1060 aaKnown RBP18.37■□□□□ 0.53
TRAF4-212ENST00000498540 GABRQQ9UN88 632 aa18.37■□□□□ 0.53
TRAF4-212ENST00000498540 PHIPQ8WWQ0 1821 aa18.37■□□□□ 0.53
TRAF4-212ENST00000498540 DOCK1Q14185 1865 aa18.37■□□□□ 0.53
TRAF4-212ENST00000498540 PHF20L1A8MW92 1017 aa18.36■□□□□ 0.53
TRAF4-212ENST00000498540 FCGRTP55899 365 aa18.36■□□□□ 0.53
TRAF4-212ENST00000498540 ATP2B3Q16720 1220 aa18.36■□□□□ 0.53
TRAF4-212ENST00000498540 RFX7Q2KHR2 1363 aa18.36■□□□□ 0.53
TRAF4-212ENST00000498540 BIN2Q9UBW5 565 aaPredicted RBP18.36■□□□□ 0.53
TRAF4-212ENST00000498540 SALL1Q9NSC2 1324 aa18.35■□□□□ 0.53
TRAF4-212ENST00000498540 CXCL11O14625 94 aa18.35■□□□□ 0.53
TRAF4-212ENST00000498540 PHKA1P46020 1223 aa18.35■□□□□ 0.53
TRAF4-212ENST00000498540 SCYL3Q8IZE3 742 aa18.35■□□□□ 0.53
TRAF4-212ENST00000498540 A0A0G2JLL6 359 aaPredicted RBP18.34■□□□□ 0.53
TRAF4-212ENST00000498540 SLURP2P0DP57 97 aa18.34■□□□□ 0.53
TRAF4-212ENST00000498540 RGS3P49796 1198 aa18.34■□□□□ 0.53
TRAF4-212ENST00000498540 UBXN2AP68543 259 aa18.34■□□□□ 0.53
TRAF4-212ENST00000498540 SH3BP5LQ7L8J4 393 aa18.34■□□□□ 0.53
TRAF4-212ENST00000498540 PRRT2Q7Z6L0 340 aaPredicted RBP18.34■□□□□ 0.53
TRAF4-212ENST00000498540 SLAIN1Q8ND83 568 aa18.34■□□□□ 0.53
TRAF4-212ENST00000498540 UNC93B1Q9H1C4 597 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms