RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ZAP70P43403 619 aa15.65■□□□□ 0.1
HSPG2-213ENST00000498495 NOGQ13253 232 aa15.65■□□□□ 0.1
HSPG2-213ENST00000498495 FAM83AQ86UY5 434 aa15.65■□□□□ 0.1
HSPG2-213ENST00000498495 LRRCC1Q9C099 1032 aa15.65■□□□□ 0.1
HSPG2-213ENST00000498495 TMEM39BQ9GZU3 492 aa15.65■□□□□ 0.1
HSPG2-213ENST00000498495 DCTPP1Q9H773 170 aa15.65■□□□□ 0.1
HSPG2-213ENST00000498495 FZD1Q9UP38 647 aa15.65■□□□□ 0.1
HSPG2-213ENST00000498495 PCDHB15Q9Y5E8 787 aa15.65■□□□□ 0.1
HSPG2-213ENST00000498495 ECM29Q5VYK3 1845 aa15.65■□□□□ 0.1
HSPG2-213ENST00000498495 CYP2E1P05181 493 aaPredicted RBP15.64■□□□□ 0.09
HSPG2-213ENST00000498495 AIDAQ96BJ3 306 aa15.64■□□□□ 0.09
HSPG2-213ENST00000498495 NSUN4Q96CB9 384 aaKnown RBP15.64■□□□□ 0.09
HSPG2-213ENST00000498495 BEGAINQ9BUH8 593 aa15.64■□□□□ 0.09
HSPG2-213ENST00000498495 WBP1LQ9NX94 342 aa15.64■□□□□ 0.09
HSPG2-213ENST00000498495 GAKO14976 1311 aa15.64■□□□□ 0.09
HSPG2-213ENST00000498495 FAM155AB1AL88 458 aaPredicted RBP15.63■□□□□ 0.09
HSPG2-213ENST00000498495 USP2O75604 605 aaPredicted RBP15.63■□□□□ 0.09
HSPG2-213ENST00000498495 BTDP43251 543 aa15.63■□□□□ 0.09
HSPG2-213ENST00000498495 IREB2P48200 963 aaKnown RBP15.63■□□□□ 0.09
HSPG2-213ENST00000498495 TCP10Q12799 353 aa15.63■□□□□ 0.09
HSPG2-213ENST00000498495 MAP3K11Q16584 847 aa15.63■□□□□ 0.09
HSPG2-213ENST00000498495 LDLRAD1Q5T700 205 aa15.63■□□□□ 0.09
HSPG2-213ENST00000498495 FAM151AQ8WW52 585 aa15.63■□□□□ 0.09
HSPG2-213ENST00000498495 TEPSINQ96N21 525 aa15.63■□□□□ 0.09
HSPG2-213ENST00000498495 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.63■□□□□ 0.09
HSPG2-213ENST00000498495 SUPT16HQ9Y5B9 1047 aaKnown RBP15.63■□□□□ 0.09
HSPG2-213ENST00000498495 MROH7-TTC4A0A0A0MT08 1334 aa15.63■□□□□ 0.09
HSPG2-213ENST00000498495 PAPPA2Q9BXP8 1791 aa15.62■□□□□ 0.09
HSPG2-213ENST00000498495 GPR75-ASB3A0A0A6YYF3 556 aa15.62■□□□□ 0.09
HSPG2-213ENST00000498495 IGSF3O75054 1194 aa15.62■□□□□ 0.09
HSPG2-213ENST00000498495 SLC10A3P09131 477 aa15.62■□□□□ 0.09
HSPG2-213ENST00000498495 KIF23Q02241 960 aaPredicted RBP15.62■□□□□ 0.09
HSPG2-213ENST00000498495 NAA16Q6N069 864 aaPredicted RBP15.62■□□□□ 0.09
HSPG2-213ENST00000498495 HOOK2Q96ED9 719 aa15.62■□□□□ 0.09
HSPG2-213ENST00000498495 SLC10A4Q96EP9 437 aa15.62■□□□□ 0.09
HSPG2-213ENST00000498495 NOL10Q9BSC4 688 aaKnown RBP15.62■□□□□ 0.09
HSPG2-213ENST00000498495 UNCXA6NJT0 531 aa15.61■□□□□ 0.09
HSPG2-213ENST00000498495 SMARCA5O60264 1052 aaPredicted RBP15.61■□□□□ 0.09
HSPG2-213ENST00000498495 NFIAQ12857 509 aa15.61■□□□□ 0.09
HSPG2-213ENST00000498495 RASAL3Q86YV0 1011 aa15.61■□□□□ 0.09
HSPG2-213ENST00000498495 CDAN1Q8IWY9 1227 aa15.61■□□□□ 0.09
HSPG2-213ENST00000498495 ZNF384Q8TF68 577 aa15.61■□□□□ 0.09
HSPG2-213ENST00000498495 ZIC5Q96T25 663 aa15.61■□□□□ 0.09
HSPG2-213ENST00000498495 IDH1O75874 414 aaKnown RBP15.6■□□□□ 0.09
HSPG2-213ENST00000498495 BAG3O95817 575 aa15.6■□□□□ 0.09
HSPG2-213ENST00000498495 AAMPQ13685 434 aa15.6■□□□□ 0.09
HSPG2-213ENST00000498495 ANKRD13AQ8IZ07 590 aa15.6■□□□□ 0.09
HSPG2-213ENST00000498495 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.6■□□□□ 0.09
HSPG2-213ENST00000498495 IDI2Q9BXS1 227 aa15.6■□□□□ 0.09
HSPG2-213ENST00000498495 PIH1D3Q9NQM4 214 aaKnown RBP15.6■□□□□ 0.09
HSPG2-213ENST00000498495 FAM198AQ9UFP1 575 aa15.6■□□□□ 0.09
HSPG2-213ENST00000498495 NDUFB9Q9Y6M9 179 aa15.6■□□□□ 0.09
HSPG2-213ENST00000498495 MYH2Q9UKX2 1941 aa15.6■□□□□ 0.09
HSPG2-213ENST00000498495 FOXN1O15353 648 aa15.59■□□□□ 0.09
HSPG2-213ENST00000498495 ENTPD3O75355 529 aa15.59■□□□□ 0.09
HSPG2-213ENST00000498495 MAP4K4O95819 1239 aaPredicted RBP15.59■□□□□ 0.09
HSPG2-213ENST00000498495 RGS3P49796 1198 aa15.59■□□□□ 0.09
HSPG2-213ENST00000498495 MAP3K9P80192 1104 aa15.59■□□□□ 0.09
HSPG2-213ENST00000498495 MAP3K12Q12852 859 aa15.59■□□□□ 0.09
HSPG2-213ENST00000498495 TTF1Q15361 905 aaPredicted RBP15.59■□□□□ 0.09
HSPG2-213ENST00000498495 DCAF15Q66K64 600 aa15.59■□□□□ 0.09
HSPG2-213ENST00000498495 REM2Q8IYK8 340 aaPredicted RBP15.59■□□□□ 0.09
HSPG2-213ENST00000498495 ANTXR1Q9H6X2 564 aa15.59■□□□□ 0.09
HSPG2-213ENST00000498495 SSC5DA1L4H1 1573 aa15.58■□□□□ 0.09
HSPG2-213ENST00000498495 CYP7A1P22680 504 aa15.58■□□□□ 0.08
HSPG2-213ENST00000498495 CTCFP49711 727 aaPredicted RBP15.58■□□□□ 0.08
HSPG2-213ENST00000498495 MKRN3Q13064 507 aaKnown RBP15.58■□□□□ 0.08
HSPG2-213ENST00000498495 PICALMQ13492 652 aa15.58■□□□□ 0.08
HSPG2-213ENST00000498495 MIGA2Q7L4E1 593 aa15.58■□□□□ 0.08
HSPG2-213ENST00000498495 ZSCAN29Q8IWY8 852 aaPredicted RBP15.58■□□□□ 0.08
HSPG2-213ENST00000498495 ZFPM1Q8IX07 1006 aa15.58■□□□□ 0.08
HSPG2-213ENST00000498495 CSRNP1Q96S65 589 aa15.58■□□□□ 0.08
HSPG2-213ENST00000498495 DNAJC2Q99543 621 aaKnown RBP15.58■□□□□ 0.08
HSPG2-213ENST00000498495 BOLA2Q9H3K6 86 aa15.58■□□□□ 0.08
HSPG2-213ENST00000498495 AATFQ9NY61 560 aaKnown RBP eCLIP15.58■□□□□ 0.08
HSPG2-213ENST00000498495 AKAP11Q9UKA4 1901 aa15.58■□□□□ 0.08
HSPG2-213ENST00000498495 WDHD1O75717 1129 aaPredicted RBP15.57■□□□□ 0.08
HSPG2-213ENST00000498495 PLCG2P16885 1265 aa15.57■□□□□ 0.08
HSPG2-213ENST00000498495 ATP5JP18859 108 aa15.57■□□□□ 0.08
HSPG2-213ENST00000498495 RHBDL3P58872 404 aa15.57■□□□□ 0.08
HSPG2-213ENST00000498495 PPP4CP60510 307 aa15.57■□□□□ 0.08
HSPG2-213ENST00000498495 SPRYD7Q5W111 196 aa15.57■□□□□ 0.08
HSPG2-213ENST00000498495 MAGEB6Q8N7X4 407 aa15.57■□□□□ 0.08
HSPG2-213ENST00000498495 CLMNQ96JQ2 1002 aa15.57■□□□□ 0.08
HSPG2-213ENST00000498495 ZBTB47Q9UFB7 747 aaPredicted RBP15.57■□□□□ 0.08
HSPG2-213ENST00000498495 GOLIM4O00461 696 aa15.56■□□□□ 0.08
HSPG2-213ENST00000498495 CA12O43570 354 aa15.56■□□□□ 0.08
HSPG2-213ENST00000498495 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-213ENST00000498495 TEX11Q8IYF3 940 aa15.56■□□□□ 0.08
HSPG2-213ENST00000498495 EXOC6Q8TAG9 804 aa15.56■□□□□ 0.08
HSPG2-213ENST00000498495 ZNF341Q9BYN7 854 aa15.56■□□□□ 0.08
HSPG2-213ENST00000498495 CSADQ9Y600 493 aa15.56■□□□□ 0.08
HSPG2-213ENST00000498495 RPAP1Q9BWH6 1393 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-213ENST00000498495 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
HSPG2-213ENST00000498495 LBX1P52954 281 aa15.55■□□□□ 0.08
HSPG2-213ENST00000498495 TMED8Q6PL24 325 aaPredicted RBP15.55■□□□□ 0.08
HSPG2-213ENST00000498495 ADGRA1Q86SQ6 560 aa15.55■□□□□ 0.08
HSPG2-213ENST00000498495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.55■□□□□ 0.08
HSPG2-213ENST00000498495 SH3RF3Q8TEJ3 882 aaPredicted RBP15.55■□□□□ 0.08
HSPG2-213ENST00000498495 GPATCH3Q96I76 525 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms