RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 ANKRD13AQ8IZ07 590 aa10.49□□□□□ -0.73
HMGXB4-207ENST00000498212 CLMNQ96JQ2 1002 aa10.49□□□□□ -0.73
HMGXB4-207ENST00000498212 MAST2Q6P0Q8 1798 aa10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 MANSC4A6NHS7 340 aaPredicted RBP10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 TBC1D8O95759 1140 aa10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 G3BP1Q13283 466 aaKnown RBP eCLIP10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 MVPQ14764 893 aaKnown RBP10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 FKBP1CQ5VVH2 108 aa10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 FAM83AQ86UY5 434 aa10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 CDAN1Q8IWY9 1227 aa10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 ZGPATQ8N5A5 531 aaKnown RBP10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 XAGE2Q96GT9 111 aa10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 WNK4Q96J92 1243 aa10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 NEUROD6Q96NK8 337 aa10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 MCOLN1Q9GZU1 580 aa10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 DAGLAQ9Y4D2 1042 aa10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 RPAP1Q9BWH6 1393 aaPredicted RBP10.48□□□□□ -0.73
HMGXB4-207ENST00000498212 RLBP1P12271 317 aa10.47□□□□□ -0.73
HMGXB4-207ENST00000498212 INHBEP58166 350 aa10.47□□□□□ -0.73
HMGXB4-207ENST00000498212 ATP8B2P98198 1209 aa10.47□□□□□ -0.73
HMGXB4-207ENST00000498212 RASGRF1Q13972 1273 aa10.47□□□□□ -0.73
HMGXB4-207ENST00000498212 DIXDC1Q155Q3 683 aa10.47□□□□□ -0.73
HMGXB4-207ENST00000498212 HOOK2Q96ED9 719 aa10.47□□□□□ -0.73
HMGXB4-207ENST00000498212 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.47□□□□□ -0.73
HMGXB4-207ENST00000498212 PDS5AQ29RF7 1337 aaKnown RBP10.47□□□□□ -0.73
HMGXB4-207ENST00000498212 CDK5RAP2Q96SN8 1893 aa10.47□□□□□ -0.73
HMGXB4-207ENST00000498212 ZBTB7BO15156 539 aaPredicted RBP10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 GORABQ5T7V8 394 aa10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 CDC42EP5Q6NZY7 148 aa10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 DZIP1Q86YF9 867 aaKnown RBP10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 IFNL1Q8IU54 200 aa10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 SSH3Q8TE77 659 aa10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 OPTNQ96CV9 577 aa10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 C1orf115Q9H7X2 142 aa10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 ELP3Q9H9T3 547 aa10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 ABCF2Q9UG63 623 aa10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 CSADQ9Y600 493 aa10.46□□□□□ -0.73
HMGXB4-207ENST00000498212 FOCADQ5VW36 1801 aa10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 CCDC85CA6NKD9 419 aa10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 ATXN8OSP0DMR3 200 aa10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 ARID4AP29374 1257 aaPredicted RBP10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 GJA5P36382 358 aa10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 MAP3K9P80192 1104 aa10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 OS9Q13438 667 aaPredicted RBP10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 VGLL4Q14135 290 aa10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 DCAF15Q66K64 600 aa10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 SPTY2D1Q68D10 685 aaPredicted RBP10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 CTU1Q7Z7A3 348 aaKnown RBP10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 SLF2Q8IX21 1173 aa10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 ZNF296Q8WUU4 475 aaPredicted RBP10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 FAM151AQ8WW52 585 aa10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 CFHR5Q9BXR6 569 aa10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 USP40Q9NVE5 1235 aa10.45□□□□□ -0.74
HMGXB4-207ENST00000498212 ATAD5Q96QE3 1844 aa10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 GAKO14976 1311 aa10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 GPR25O00155 361 aa10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 IGF2BP3O00425 579 aaKnown RBP eCLIP10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 SURF6O75683 361 aaKnown RBP10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 TCP10Q12799 353 aa10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 NOM1Q5C9Z4 860 aaKnown RBP10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 OTUD7BQ6GQQ9 843 aa10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 ERICH6Q7L0X2 663 aa10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 SPATA5Q8NB90 893 aa10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 WRNIP1Q96S55 665 aa10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 GPR108Q9NPR9 543 aa10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 HMG20BQ9P0W2 317 aa10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 DOCK1Q14185 1865 aa10.44□□□□□ -0.74
HMGXB4-207ENST00000498212 MROH7-TTC4A0A0A0MT08 1334 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 UQCRFS1P1P0C7P4 283 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 MS4A1P11836 297 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 NFIAQ12857 509 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 TNNI3KQ59H18 835 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 PI16Q6UXB8 463 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 MIGA2Q7L4E1 593 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 PANK1Q8TE04 598 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 OTUD5Q96G74 571 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 FAM163AQ96GL9 167 aaPredicted RBP10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 ZNF341Q9BYN7 854 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 FAM198AQ9UFP1 575 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 SNCAIPQ9Y6H5 919 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 FPGT-TNNI3KV9GXZ4 949 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 PTPRFP10586 1907 aa10.43□□□□□ -0.74
HMGXB4-207ENST00000498212 PHIPQ8WWQ0 1821 aa10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 TESPA1A2RU30 521 aaPredicted RBP10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 SPDYE5A6NIY4 337 aa10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 FKTNO75072 461 aa10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 MCAMP43121 646 aa10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 BTDP43251 543 aa10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 GTF2A2P52657 109 aa10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 MECOMQ03112 1051 aa10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 PKN2Q16513 984 aaKnown RBP10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 CCDC158Q5M9N0 1113 aa10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 TTC39AQ5SRH9 613 aa10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 CEP85Q6P2H3 762 aa10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 ERO1BQ86YB8 467 aa10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 ZKSCAN4Q969J2 545 aaPredicted RBP10.42□□□□□ -0.74
HMGXB4-207ENST00000498212 MS4A4AQ96JQ5 239 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms