RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 DCAF15Q66K64 600 aa27.28■■□□□ 1.96
CLIC4-204ENST00000497755 ZSWIM8A7E2V4 1837 aa27.27■■□□□ 1.96
CLIC4-204ENST00000497755 MYCP01106 439 aaPredicted RBP27.27■■□□□ 1.96
CLIC4-204ENST00000497755 INPP5BP32019 993 aa27.27■■□□□ 1.96
CLIC4-204ENST00000497755 PPATQ06203 517 aa27.27■■□□□ 1.96
CLIC4-204ENST00000497755 KIF22Q14807 665 aa27.27■■□□□ 1.96
CLIC4-204ENST00000497755 SH3TC2Q8TF17 1288 aa27.27■■□□□ 1.96
CLIC4-204ENST00000497755 ZNF341Q9BYN7 854 aa27.27■■□□□ 1.96
CLIC4-204ENST00000497755 RPAP1Q9BWH6 1393 aaPredicted RBP27.26■■□□□ 1.95
CLIC4-204ENST00000497755 EYA2O00167 538 aa27.26■■□□□ 1.95
CLIC4-204ENST00000497755 C17orf99Q6UX52 265 aa27.26■■□□□ 1.95
CLIC4-204ENST00000497755 WDR66Q8TBY9 1149 aa27.26■■□□□ 1.95
CLIC4-204ENST00000497755 FAM151AQ8WW52 585 aa27.26■■□□□ 1.95
CLIC4-204ENST00000497755 SSH1Q8WYL5 1049 aa27.26■■□□□ 1.95
CLIC4-204ENST00000497755 GNRH1P01148 92 aa27.25■■□□□ 1.95
CLIC4-204ENST00000497755 LPIN2Q92539 896 aa27.25■■□□□ 1.95
CLIC4-204ENST00000497755 ZNF112Q9UJU3 913 aa27.25■■□□□ 1.95
CLIC4-204ENST00000497755 CDC42EP5Q6NZY7 148 aa27.24■■□□□ 1.95
CLIC4-204ENST00000497755 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.24■■□□□ 1.95
CLIC4-204ENST00000497755 SLC5A1P13866 664 aa27.23■■□□□ 1.95
CLIC4-204ENST00000497755 CTGFP29279 349 aa27.23■■□□□ 1.95
CLIC4-204ENST00000497755 ATG9AQ7Z3C6 839 aa27.23■■□□□ 1.95
CLIC4-204ENST00000497755 CPA4Q9UI42 421 aa27.23■■□□□ 1.95
CLIC4-204ENST00000497755 DAGLAQ9Y4D2 1042 aa27.23■■□□□ 1.95
CLIC4-204ENST00000497755 ECM2O94769 699 aaPredicted RBP27.22■■□□□ 1.95
CLIC4-204ENST00000497755 PRMT2P55345 433 aa27.22■■□□□ 1.95
CLIC4-204ENST00000497755 TCP10Q12799 353 aa27.22■■□□□ 1.95
CLIC4-204ENST00000497755 NFIAQ12857 509 aa27.22■■□□□ 1.95
CLIC4-204ENST00000497755 DIXDC1Q155Q3 683 aa27.22■■□□□ 1.95
CLIC4-204ENST00000497755 ANKRD23Q86SG2 305 aa27.22■■□□□ 1.95
CLIC4-204ENST00000497755 KCNH4Q9UQ05 1017 aa27.22■■□□□ 1.95
CLIC4-204ENST00000497755 AK9Q5TCS8 1911 aa27.22■■□□□ 1.95
CLIC4-204ENST00000497755 MOGSQ13724 837 aa27.21■■□□□ 1.95
CLIC4-204ENST00000497755 ZNF316A6NFI3 1004 aaPredicted RBP27.2■■□□□ 1.94
CLIC4-204ENST00000497755 PDHXO00330 501 aa27.2■■□□□ 1.94
CLIC4-204ENST00000497755 FXR1P51114 621 aaKnown RBP eCLIP27.2■■□□□ 1.94
CLIC4-204ENST00000497755 COLQQ9Y215 455 aaPredicted RBP27.2■■□□□ 1.94
CLIC4-204ENST00000497755 MYH13Q9UKX3 1938 aa27.2■■□□□ 1.94
CLIC4-204ENST00000497755 PRDX5P30044 214 aa27.19■■□□□ 1.94
CLIC4-204ENST00000497755 PSMC4P43686 418 aa27.19■■□□□ 1.94
CLIC4-204ENST00000497755 TRIM47Q96LD4 638 aa27.19■■□□□ 1.94
CLIC4-204ENST00000497755 FAM198AQ9UFP1 575 aa27.19■■□□□ 1.94
CLIC4-204ENST00000497755 ADGRA2Q96PE1 1338 aa27.18■■□□□ 1.94
CLIC4-204ENST00000497755 ZEB1P37275 1124 aaPredicted RBP27.18■■□□□ 1.94
CLIC4-204ENST00000497755 USP40Q9NVE5 1235 aa27.18■■□□□ 1.94
CLIC4-204ENST00000497755 SRRDQ9UH36 339 aa27.18■■□□□ 1.94
CLIC4-204ENST00000497755 TRIOBPQ9H2D6 2365 aa27.17■■□□□ 1.94
CLIC4-204ENST00000497755 E9PSI1 815 aa27.17■■□□□ 1.94
CLIC4-204ENST00000497755 MTFR1Q15390 333 aa27.17■■□□□ 1.94
CLIC4-204ENST00000497755 NOL9Q5SY16 702 aaKnown RBP27.17■■□□□ 1.94
CLIC4-204ENST00000497755 ZFPM1Q8IX07 1006 aa27.17■■□□□ 1.94
CLIC4-204ENST00000497755 LDHBP07195 334 aaKnown RBP27.16■■□□□ 1.94
CLIC4-204ENST00000497755 OSBPP22059 807 aa27.16■■□□□ 1.94
CLIC4-204ENST00000497755 H0YGN5 161 aa27.15■■□□□ 1.94
CLIC4-204ENST00000497755 CIAO1O76071 339 aa27.15■■□□□ 1.94
CLIC4-204ENST00000497755 HOXD10P28358 340 aa27.15■■□□□ 1.94
CLIC4-204ENST00000497755 SLFN5Q08AF3 891 aa27.15■■□□□ 1.94
CLIC4-204ENST00000497755 ATP2B3Q16720 1220 aa27.15■■□□□ 1.94
CLIC4-204ENST00000497755 SIL1Q9H173 461 aa27.15■■□□□ 1.94
CLIC4-204ENST00000497755 CEP126Q9P2H0 1117 aa27.15■■□□□ 1.94
CLIC4-204ENST00000497755 FBXO3Q9UK99 471 aa27.15■■□□□ 1.94
CLIC4-204ENST00000497755 FMNL1O95466 1100 aaPredicted RBP27.14■■□□□ 1.94
CLIC4-204ENST00000497755 GPAT2Q6NUI2 795 aa27.14■■□□□ 1.94
CLIC4-204ENST00000497755 SHISA4Q96DD7 197 aa27.14■■□□□ 1.94
CLIC4-204ENST00000497755 GNL3LQ9NVN8 582 aaKnown RBP27.14■■□□□ 1.94
CLIC4-204ENST00000497755 SALL1Q9NSC2 1324 aa27.14■■□□□ 1.93
CLIC4-204ENST00000497755 PHF20L1A8MW92 1017 aa27.13■■□□□ 1.93
CLIC4-204ENST00000497755 CXCL11O14625 94 aa27.13■■□□□ 1.93
CLIC4-204ENST00000497755 ALDH1L2Q3SY69 923 aa27.13■■□□□ 1.93
CLIC4-204ENST00000497755 GRK4P32298 578 aa27.12■■□□□ 1.93
CLIC4-204ENST00000497755 PHKA1P46020 1223 aa27.12■■□□□ 1.93
CLIC4-204ENST00000497755 RAET1EQ8TD07 263 aa27.12■■□□□ 1.93
CLIC4-204ENST00000497755 DENND2AQ9ULE3 1009 aa27.12■■□□□ 1.93
CLIC4-204ENST00000497755 SZT2Q5T011 3432 aa27.12■■□□□ 1.93
CLIC4-204ENST00000497755 SEMA3EO15041 775 aa27.11■■□□□ 1.93
CLIC4-204ENST00000497755 BCRP11274 1271 aa27.11■■□□□ 1.93
CLIC4-204ENST00000497755 RANBP2P49792 3224 aaKnown RBP27.11■■□□□ 1.93
CLIC4-204ENST00000497755 ATRNL1Q5VV63 1379 aa27.1■■□□□ 1.93
CLIC4-204ENST00000497755 UBTFL1P0CB47 393 aaPredicted RBP27.1■■□□□ 1.93
CLIC4-204ENST00000497755 CYP2C8P10632 490 aa27.1■■□□□ 1.93
CLIC4-204ENST00000497755 IDI2Q9BXS1 227 aa27.1■■□□□ 1.93
CLIC4-204ENST00000497755 MYPNQ86TC9 1320 aa27.1■■□□□ 1.93
CLIC4-204ENST00000497755 ZBTB22O15209 634 aa27.09■■□□□ 1.93
CLIC4-204ENST00000497755 RGS3P49796 1198 aa27.09■■□□□ 1.93
CLIC4-204ENST00000497755 SH3BP5LQ7L8J4 393 aa27.09■■□□□ 1.93
CLIC4-204ENST00000497755 CDCA7LQ96GN5 454 aa27.09■■□□□ 1.93
CLIC4-204ENST00000497755 PARK7Q99497 189 aaKnown RBP27.09■■□□□ 1.93
CLIC4-204ENST00000497755 SMC4Q9NTJ3 1288 aa27.09■■□□□ 1.93
CLIC4-204ENST00000497755 ZHX2Q9Y6X8 837 aa27.09■■□□□ 1.93
CLIC4-204ENST00000497755 MYH2Q9UKX2 1941 aa27.08■■□□□ 1.93
CLIC4-204ENST00000497755 ENTPD3O75355 529 aa27.08■■□□□ 1.93
CLIC4-204ENST00000497755 CCL5P13501 91 aa27.08■■□□□ 1.93
CLIC4-204ENST00000497755 ADORA1P30542 326 aa27.08■■□□□ 1.93
CLIC4-204ENST00000497755 IL15P40933 162 aaPredicted RBP27.08■■□□□ 1.93
CLIC4-204ENST00000497755 GJA8P48165 433 aa27.08■■□□□ 1.93
CLIC4-204ENST00000497755 MAP3K10Q02779 954 aa27.08■■□□□ 1.93
CLIC4-204ENST00000497755 SCYL3Q8IZE3 742 aa27.08■■□□□ 1.93
CLIC4-204ENST00000497755 NKX2-3Q8TAU0 364 aa27.08■■□□□ 1.93
CLIC4-204ENST00000497755 PA2G4Q9UQ80 394 aaKnown RBP27.08■■□□□ 1.93
CLIC4-204ENST00000497755 GJB1P08034 283 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms