RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 MFSD14BQ5SR56 506 aa13.13□□□□□ -0.31
COMMD6-212ENST00000497707 DACT2Q5SW24 774 aa13.13□□□□□ -0.31
COMMD6-212ENST00000497707 AIDAQ96BJ3 306 aa13.13□□□□□ -0.31
COMMD6-212ENST00000497707 UPF3BQ9BZI7 483 aaKnown RBP13.13□□□□□ -0.31
COMMD6-212ENST00000497707 ZNF277Q9NRM2 450 aaPredicted RBP13.13□□□□□ -0.31
COMMD6-212ENST00000497707 PSME4Q14997 1843 aa13.12□□□□□ -0.31
COMMD6-212ENST00000497707 GPR75-ASB3A0A0A6YYF3 556 aa13.12□□□□□ -0.31
COMMD6-212ENST00000497707 SMIM22K7EJ46 135 aa13.12□□□□□ -0.31
COMMD6-212ENST00000497707 NFKBIEO00221 500 aa13.12□□□□□ -0.31
COMMD6-212ENST00000497707 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
COMMD6-212ENST00000497707 TMED8Q6PL24 325 aaPredicted RBP13.12□□□□□ -0.31
COMMD6-212ENST00000497707 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
COMMD6-212ENST00000497707 TBC1D22AQ8WUA7 517 aa13.12□□□□□ -0.31
COMMD6-212ENST00000497707 JAKMIP1Q96N16 626 aaKnown RBP13.12□□□□□ -0.31
COMMD6-212ENST00000497707 VPS33BQ9H267 617 aa13.12□□□□□ -0.31
COMMD6-212ENST00000497707 SLC4A4Q9Y6R1 1079 aa13.12□□□□□ -0.31
COMMD6-212ENST00000497707 ARFGEF1Q9Y6D6 1849 aa13.11□□□□□ -0.31
COMMD6-212ENST00000497707 CDK5RAP2Q96SN8 1893 aa13.11□□□□□ -0.31
COMMD6-212ENST00000497707 PPIP5K2O43314 1243 aa13.11□□□□□ -0.31
COMMD6-212ENST00000497707 FKBP1AP62942 108 aaKnown RBP13.11□□□□□ -0.31
COMMD6-212ENST00000497707 STRIP1Q5VSL9 837 aa13.11□□□□□ -0.31
COMMD6-212ENST00000497707 SDR42E1Q8WUS8 393 aa13.11□□□□□ -0.31
COMMD6-212ENST00000497707 INCENPQ9NQS7 918 aa13.11□□□□□ -0.31
COMMD6-212ENST00000497707 AATFQ9NY61 560 aaKnown RBP eCLIP13.11□□□□□ -0.31
COMMD6-212ENST00000497707 MKRN1Q9UHC7 482 aaKnown RBP13.11□□□□□ -0.31
COMMD6-212ENST00000497707 CTNNA3Q9UI47 895 aa13.11□□□□□ -0.31
COMMD6-212ENST00000497707 SUGT1Q9Y2Z0 365 aa13.11□□□□□ -0.31
COMMD6-212ENST00000497707 GAKO14976 1311 aa13.11□□□□□ -0.31
COMMD6-212ENST00000497707 BAZ2AQ9UIF9 1905 aaKnown RBP13.1□□□□□ -0.31
COMMD6-212ENST00000497707 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 E7EWF7 191 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 ZKSCAN1P17029 563 aaPredicted RBP13.1□□□□□ -0.31
COMMD6-212ENST00000497707 GNAT2P19087 354 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 RHBDL3P58872 404 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 HAND2P61296 217 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 EXOSC10Q01780 885 aaKnown RBP13.1□□□□□ -0.31
COMMD6-212ENST00000497707 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 RNF20Q5VTR2 975 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 RUFY3Q7L099 469 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 DZIP1Q86YF9 867 aaKnown RBP13.1□□□□□ -0.31
COMMD6-212ENST00000497707 SH3RF3Q8TEJ3 882 aaPredicted RBP13.1□□□□□ -0.31
COMMD6-212ENST00000497707 FHDC1Q9C0D6 1143 aaPredicted RBP13.1□□□□□ -0.31
COMMD6-212ENST00000497707 ALDH8A1Q9H2A2 487 aaPredicted RBP13.1□□□□□ -0.31
COMMD6-212ENST00000497707 BCS1LQ9Y276 419 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 MROH7-TTC4A0A0A0MT08 1334 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 ZMYM6O95789 1325 aa13.1□□□□□ -0.31
COMMD6-212ENST00000497707 ADAMTSL1Q8N6G6 1762 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 G3V3G9 751 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 APPP05067 770 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 LDHCP07864 332 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 CASTP20810 708 aaKnown RBP13.09□□□□□ -0.31
COMMD6-212ENST00000497707 RPS6KB1P23443 525 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 IARSP41252 1262 aaKnown RBP13.09□□□□□ -0.31
COMMD6-212ENST00000497707 GSTO1P78417 241 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 TBC1D10CQ8IV04 446 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 FBXW7Q969H0 707 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 NEK1Q96PY6 1258 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 GMLQ99445 158 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 LARP6Q9BRS8 491 aaKnown RBP13.09□□□□□ -0.31
COMMD6-212ENST00000497707 MRIQ9BWK5 157 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 DAGLAQ9Y4D2 1042 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 PCDHAC2Q9Y5I4 1007 aa13.09□□□□□ -0.31
COMMD6-212ENST00000497707 C19orf67A6NJJ6 358 aa13.08□□□□□ -0.32
COMMD6-212ENST00000497707 F8W031 263 aaPredicted RBP13.08□□□□□ -0.32
COMMD6-212ENST00000497707 ZNF213O14771 459 aa13.08□□□□□ -0.32
COMMD6-212ENST00000497707 VIL1P09327 827 aaKnown RBP13.08□□□□□ -0.32
COMMD6-212ENST00000497707 AK2P54819 239 aa13.08□□□□□ -0.32
COMMD6-212ENST00000497707 CTDSPL2Q05D32 466 aa13.08□□□□□ -0.32
COMMD6-212ENST00000497707 BECN1Q14457 450 aa13.08□□□□□ -0.32
COMMD6-212ENST00000497707 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
COMMD6-212ENST00000497707 CTR9Q6PD62 1173 aa13.08□□□□□ -0.32
COMMD6-212ENST00000497707 TCEANC2Q96MN5 208 aa13.08□□□□□ -0.32
COMMD6-212ENST00000497707 DCP1AQ9NPI6 582 aaPredicted RBP13.08□□□□□ -0.32
COMMD6-212ENST00000497707 PDRG1Q9NUG6 133 aa13.08□□□□□ -0.32
COMMD6-212ENST00000497707 TTF2Q9UNY4 1162 aaKnown RBP13.08□□□□□ -0.32
COMMD6-212ENST00000497707 CYP2D7A0A087X1C5 515 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 K7ELQ4 463 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-212ENST00000497707 PSMA5P28066 241 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 BTDP43251 543 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 SCNN1DP51172 638 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 TOB2Q14106 344 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-212ENST00000497707 KRT32Q14532 448 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 IMMTQ16891 758 aaKnown RBP13.07□□□□□ -0.32
COMMD6-212ENST00000497707 APOBEC3HQ6NTF7 200 aaKnown RBP13.07□□□□□ -0.32
COMMD6-212ENST00000497707 GIMAP6Q6P9H5 292 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 HHIPL2Q6UWX4 724 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 SYT17Q9BSW7 474 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 ZNRF3Q9ULT6 936 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 CYP46A1Q9Y6A2 500 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 LTBP3Q9NS15 1303 aa13.07□□□□□ -0.32
COMMD6-212ENST00000497707 PSMD14O00487 310 aa13.06□□□□□ -0.32
COMMD6-212ENST00000497707 ST18O60284 1047 aa13.06□□□□□ -0.32
COMMD6-212ENST00000497707 RAD17O75943 681 aa13.06□□□□□ -0.32
COMMD6-212ENST00000497707 CYP2D6P10635 497 aa13.06□□□□□ -0.32
COMMD6-212ENST00000497707 ANTXR2P58335 489 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms