RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-209	ENST00000497511	CCDC152	Q4G0S7	254 aa		14.02	□□□□□ -0.17
SKAP2-209	ENST00000497511	DDRGK1	Q96HY6	314 aa		14.02	□□□□□ -0.17
SKAP2-209	ENST00000497511	CCDC85A	Q96PX6	553 aa	Predicted RBP	14.02	□□□□□ -0.17
SKAP2-209	ENST00000497511	SEC31B	Q9NQW1	1179 aa		14.02	□□□□□ -0.17
SKAP2-209	ENST00000497511	HYPK	Q9NX55	129 aa		14.02	□□□□□ -0.17
SKAP2-209	ENST00000497511	AKAP11	Q9UKA4	1901 aa		14.02	□□□□□ -0.17
SKAP2-209	ENST00000497511	PITPNM2	Q9BZ72	1349 aa		14.01	□□□□□ -0.17
SKAP2-209	ENST00000497511	USP17L3	A6NCW0	530 aa		14.01	□□□□□ -0.17
SKAP2-209	ENST00000497511	USP17L4	A6NCW7	530 aa		14.01	□□□□□ -0.17
SKAP2-209	ENST00000497511	SREBF2	Q12772	1141 aa		14.01	□□□□□ -0.17
SKAP2-209	ENST00000497511	PRAMEF18	Q5VWM3	479 aa		14.01	□□□□□ -0.17
SKAP2-209	ENST00000497511	FBXO46	Q6PJ61	603 aa	Predicted RBP	14.01	□□□□□ -0.17
SKAP2-209	ENST00000497511	USP17L1	Q7RTZ2	530 aa		14.01	□□□□□ -0.17
SKAP2-209	ENST00000497511	OGFOD1	Q8N543	542 aa		14.01	□□□□□ -0.17
SKAP2-209	ENST00000497511	FAM160A2	Q8N612	972 aa	Predicted RBP	14.01	□□□□□ -0.17
SKAP2-209	ENST00000497511	GCC1	Q96CN9	775 aa		14.01	□□□□□ -0.17
SKAP2-209	ENST00000497511	XDH	P47989	1333 aa		14	□□□□□ -0.17
SKAP2-209	ENST00000497511	GPR25	O00155	361 aa		14	□□□□□ -0.17
SKAP2-209	ENST00000497511	CHL1	O00533	1208 aa		14	□□□□□ -0.17
SKAP2-209	ENST00000497511	GUCA2A	Q02747	115 aa		14	□□□□□ -0.17
SKAP2-209	ENST00000497511	ANKRD18A	Q8IVF6	992 aa		14	□□□□□ -0.17
SKAP2-209	ENST00000497511	CCDC146	Q8IYE0	955 aa		14	□□□□□ -0.17
SKAP2-209	ENST00000497511	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	14	□□□□□ -0.17
SKAP2-209	ENST00000497511	PAPPA2	Q9BXP8	1791 aa		13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511	DDX60	Q8IY21	1712 aa	Known RBP	13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511	FKTN	O75072	461 aa		13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511	HOXB7	P09629	217 aa		13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511	NDUFV2	P19404	249 aa		13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511	ATP2B4	P23634	1241 aa		13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511	TRIM28	Q13263	835 aa	Known RBP	13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511	PRKG1	Q13976	671 aa		13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511	PODN	Q7Z5L7	613 aa		13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511	MYD88	Q99836	296 aa		13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511		V9GY48	417 aa	Predicted RBP	13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511	POLR2A	P24928	1970 aa	Known RBP	13.99	□□□□□ -0.17
SKAP2-209	ENST00000497511	SPDYE5	A6NIY4	337 aa		13.98	□□□□□ -0.17
SKAP2-209	ENST00000497511	SPTLC1	O15269	473 aa		13.98	□□□□□ -0.17
SKAP2-209	ENST00000497511	NBPF9	Q3BBW0	867 aa		13.98	□□□□□ -0.17
SKAP2-209	ENST00000497511	ARMC9	Q7Z3E5	817 aa		13.98	□□□□□ -0.17
SKAP2-209	ENST00000497511	RETREG3	Q86VR2	466 aa		13.98	□□□□□ -0.17
SKAP2-209	ENST00000497511	PDE8A	O60658	829 aa		13.97	□□□□□ -0.17
SKAP2-209	ENST00000497511	TM4SF4	P48230	202 aa		13.97	□□□□□ -0.17
SKAP2-209	ENST00000497511	DUSP27	Q5VZP5	1158 aa		13.97	□□□□□ -0.17
SKAP2-209	ENST00000497511	JARID2	Q92833	1246 aa	Predicted RBP	13.97	□□□□□ -0.17
SKAP2-209	ENST00000497511	GML	Q99445	158 aa		13.97	□□□□□ -0.17
SKAP2-209	ENST00000497511	PCDHGC3	Q9UN70	934 aa		13.97	□□□□□ -0.17
SKAP2-209	ENST00000497511	WDR43	Q15061	677 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
SKAP2-209	ENST00000497511	CDC5L	Q99459	802 aa	Known RBP	13.96	□□□□□ -0.17
SKAP2-209	ENST00000497511	PRKD2	Q9BZL6	878 aa		13.96	□□□□□ -0.17
SKAP2-209	ENST00000497511	CWC25	Q9NXE8	425 aa	Predicted RBP	13.96	□□□□□ -0.17
SKAP2-209	ENST00000497511	ZNF609	O15014	1411 aa		13.96	□□□□□ -0.18
SKAP2-209	ENST00000497511	MYO3B	Q8WXR4	1341 aa		13.95	□□□□□ -0.18
SKAP2-209	ENST00000497511	COL4A1	P02462	1669 aa		13.95	□□□□□ -0.18
SKAP2-209	ENST00000497511	SASH1	O94885	1247 aa		13.95	□□□□□ -0.18
SKAP2-209	ENST00000497511	ALDH1A1	P00352	501 aa		13.95	□□□□□ -0.18
SKAP2-209	ENST00000497511	PCCA	P05165	728 aa	Predicted RBP	13.95	□□□□□ -0.18
SKAP2-209	ENST00000497511	NOM1	Q5C9Z4	860 aa	Known RBP	13.95	□□□□□ -0.18
SKAP2-209	ENST00000497511	MYSM1	Q5VVJ2	828 aa		13.95	□□□□□ -0.18
SKAP2-209	ENST00000497511	CCDC191	Q8NCU4	936 aa		13.95	□□□□□ -0.18
SKAP2-209	ENST00000497511	MXD3	Q9BW11	206 aa		13.95	□□□□□ -0.18
SKAP2-209	ENST00000497511	TRIM17	Q9Y577	477 aa		13.95	□□□□□ -0.18
SKAP2-209	ENST00000497511	WNT10B	O00744	389 aa		13.94	□□□□□ -0.18
SKAP2-209	ENST00000497511	MMP16	P51512	607 aa		13.94	□□□□□ -0.18
SKAP2-209	ENST00000497511	PTPN12	Q05209	780 aa	Known RBP	13.94	□□□□□ -0.18
SKAP2-209	ENST00000497511	MTMR2	Q13614	643 aa		13.94	□□□□□ -0.18
SKAP2-209	ENST00000497511	TUSC1	Q2TAM9	212 aa		13.94	□□□□□ -0.18
SKAP2-209	ENST00000497511	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.94	□□□□□ -0.18
SKAP2-209	ENST00000497511	PHAX	Q9H814	394 aa	Known RBP	13.94	□□□□□ -0.18
SKAP2-209	ENST00000497511	ANGEL1	Q9UNK9	670 aa	Known RBP	13.94	□□□□□ -0.18
SKAP2-209	ENST00000497511	SCN9A	Q15858	1988 aa		13.94	□□□□□ -0.18
SKAP2-209	ENST00000497511	ELL2	O00472	640 aa	Predicted RBP	13.93	□□□□□ -0.18
SKAP2-209	ENST00000497511	DDX58	O95786	925 aa	Known RBP	13.93	□□□□□ -0.18
SKAP2-209	ENST00000497511	RALBP1	Q15311	655 aa		13.93	□□□□□ -0.18
SKAP2-209	ENST00000497511	DACT2	Q5SW24	774 aa		13.93	□□□□□ -0.18
SKAP2-209	ENST00000497511	RUNDC1	Q96C34	613 aa		13.93	□□□□□ -0.18
SKAP2-209	ENST00000497511	SLC10A4	Q96EP9	437 aa		13.93	□□□□□ -0.18
SKAP2-209	ENST00000497511	MED23	Q9ULK4	1368 aa		13.93	□□□□□ -0.18
SKAP2-209	ENST00000497511	MANSC4	A6NHS7	340 aa	Predicted RBP	13.92	□□□□□ -0.18
SKAP2-209	ENST00000497511	HABP4	Q5JVS0	413 aa	Known RBP	13.92	□□□□□ -0.18
SKAP2-209	ENST00000497511	STRIP1	Q5VSL9	837 aa		13.92	□□□□□ -0.18
SKAP2-209	ENST00000497511	SPRYD7	Q5W111	196 aa		13.92	□□□□□ -0.18
SKAP2-209	ENST00000497511	INTS3	Q68E01	1043 aa	Known RBP	13.92	□□□□□ -0.18
SKAP2-209	ENST00000497511	KIAA0825	Q8IV33	1275 aa		13.92	□□□□□ -0.18
SKAP2-209	ENST00000497511	FAM117A	Q9C073	453 aa		13.92	□□□□□ -0.18
SKAP2-209	ENST00000497511	COA1	Q9GZY4	146 aa		13.92	□□□□□ -0.18
SKAP2-209	ENST00000497511	R3HDML	Q9H3Y0	253 aa		13.92	□□□□□ -0.18
SKAP2-209	ENST00000497511	DXO	O77932	396 aa	Known RBP	13.91	□□□□□ -0.18
SKAP2-209	ENST00000497511	SLC19A1	P41440	591 aa		13.91	□□□□□ -0.18
SKAP2-209	ENST00000497511	CCT4	P50991	539 aa	Known RBP	13.91	□□□□□ -0.18
SKAP2-209	ENST00000497511	CTSW	P56202	376 aa		13.91	□□□□□ -0.18
SKAP2-209	ENST00000497511	INHBE	P58166	350 aa		13.91	□□□□□ -0.18
SKAP2-209	ENST00000497511	SYMPK	Q92797	1274 aa	Known RBP	13.91	□□□□□ -0.18
SKAP2-209	ENST00000497511	CFHR5	Q9BXR6	569 aa		13.91	□□□□□ -0.18
SKAP2-209	ENST00000497511	PRDM9	Q9NQV7	894 aa		13.91	□□□□□ -0.18
SKAP2-209	ENST00000497511	MBIP	Q9NS73	344 aa		13.91	□□□□□ -0.18
SKAP2-209	ENST00000497511	MINPP1	Q9UNW1	487 aa		13.91	□□□□□ -0.18
SKAP2-209	ENST00000497511	WTIP	A6NIX2	430 aa	Predicted RBP	13.9	□□□□□ -0.18
SKAP2-209	ENST00000497511	IGHMBP2	P38935	993 aa	Known RBP	13.9	□□□□□ -0.18
SKAP2-209	ENST00000497511	KCNJ4	P48050	445 aa		13.9	□□□□□ -0.18
SKAP2-209	ENST00000497511	MMP14	P50281	582 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms