RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, human

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIT-208	ENST00000497382	RAB27A	P51159	221 aa		11.02	□□□□□ -0.64
VIT-208	ENST00000497382	SH3BGR	P55822	239 aa	Predicted RBP	11.02	□□□□□ -0.64
VIT-208	ENST00000497382	MPP3	Q13368	585 aa		11.02	□□□□□ -0.64
VIT-208	ENST00000497382	DCTN1	Q14203	1278 aa		11.02	□□□□□ -0.64
VIT-208	ENST00000497382	TAF7	Q15545	349 aa	Predicted RBP	11.02	□□□□□ -0.64
VIT-208	ENST00000497382	ARHGAP27	Q6ZUM4	889 aa		11.02	□□□□□ -0.64
VIT-208	ENST00000497382	STK11IP	Q8N1F8	1099 aa		11.02	□□□□□ -0.64
VIT-208	ENST00000497382	FBXO18	Q8NFZ0	1043 aa		11.02	□□□□□ -0.64
VIT-208	ENST00000497382	UIMC1	Q96RL1	719 aa		11.02	□□□□□ -0.64
VIT-208	ENST00000497382	NAP1L4	Q99733	375 aa	Known RBP	11.02	□□□□□ -0.64
VIT-208	ENST00000497382	MAK16	Q9BXY0	300 aa	Known RBP	11.02	□□□□□ -0.64
VIT-208	ENST00000497382	NPC1L1	Q9UHC9	1359 aa		11.02	□□□□□ -0.64
VIT-208	ENST00000497382	PIK3CA	P42336	1068 aa		11.02	□□□□□ -0.65
VIT-208	ENST00000497382	GBP6	Q6ZN66	633 aa		11.02	□□□□□ -0.65
VIT-208	ENST00000497382	IQUB	Q8NA54	791 aa		11.02	□□□□□ -0.65
VIT-208	ENST00000497382	SVIP	Q8NHG7	77 aa		11.02	□□□□□ -0.65
VIT-208	ENST00000497382	GOLGA5	Q8TBA6	731 aa		11.02	□□□□□ -0.65
VIT-208	ENST00000497382	USP33	Q8TEY7	942 aa		11.02	□□□□□ -0.65
VIT-208	ENST00000497382	EZH1	Q92800	747 aa	Predicted RBP	11.02	□□□□□ -0.65
VIT-208	ENST00000497382	CDHR1	Q96JP9	859 aa		11.02	□□□□□ -0.65
VIT-208	ENST00000497382	ZMAT5	Q9UDW3	170 aa	Known RBP	11.02	□□□□□ -0.65
VIT-208	ENST00000497382	TONSL	Q96HA7	1378 aa		11.02	□□□□□ -0.65
VIT-208	ENST00000497382	TCEAL1	Q15170	157 aa		11.02	□□□□□ -0.65
VIT-208	ENST00000497382	IWS1	Q96ST2	819 aa		11.02	□□□□□ -0.65
VIT-208	ENST00000497382	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.02	□□□□□ -0.65
VIT-208	ENST00000497382	DISP2	A7MBM2	1401 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	RTN3	O95197	1032 aa	Predicted RBP	11.01	□□□□□ -0.65
VIT-208	ENST00000497382	SNX1	Q13596	522 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	SIM2	Q14190	667 aa	Predicted RBP	11.01	□□□□□ -0.65
VIT-208	ENST00000497382	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.01	□□□□□ -0.65
VIT-208	ENST00000497382	EXOC6	Q8TAG9	804 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	PLSCR2	Q9NRY7	297 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	CGNL1	Q0VF96	1302 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	USP32	Q8NFA0	1604 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	TLDC2	A0PJX2	215 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	EME2	A4GXA9	379 aa	Predicted RBP	11.01	□□□□□ -0.65
VIT-208	ENST00000497382	FAM177B	A6PVY3	158 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	GOLGA6L19	H0YKK7	550 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	ELL2	O00472	640 aa	Predicted RBP	11.01	□□□□□ -0.65
VIT-208	ENST00000497382	KIAA0753	Q2KHM9	967 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	CCDC144B	Q3MJ40	725 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	KBTBD12	Q3ZCT8	623 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	DEFB132	Q7Z7B7	95 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	ATP11C	Q8NB49	1132 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	PHACTR1	Q9C0D0	580 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	SLK	Q9H2G2	1235 aa	Predicted RBP	11.01	□□□□□ -0.65
VIT-208	ENST00000497382	AS3MT	Q9HBK9	375 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	SENP2	Q9HC62	589 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	KMT5A	Q9NQR1	393 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	QPCTL	Q9NXS2	382 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.01	□□□□□ -0.65
VIT-208	ENST00000497382	ACAD8	Q9UKU7	415 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	CHMP3	Q9Y3E7	222 aa		11.01	□□□□□ -0.65
VIT-208	ENST00000497382	SMG6	Q86US8	1419 aa	Known RBP	11	□□□□□ -0.65
VIT-208	ENST00000497382	NEXMIF	Q5QGS0	1516 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	RTN2	O75298	545 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	RLBP1	P12271	317 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	ZRSR1	Q15695	479 aa	Known RBP	11	□□□□□ -0.65
VIT-208	ENST00000497382	PEX5L	Q8IYB4	626 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	DDX12P	Q92771	950 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	MAP3K14	Q99558	947 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	TBK1	Q9UHD2	729 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	KIF1A	Q12756	1690 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	PRSS47	A8MTI9	375 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	EIF3F	O00303	357 aa	Predicted RBP	11	□□□□□ -0.65
VIT-208	ENST00000497382	LDHA	P00338	332 aa	Known RBP	11	□□□□□ -0.65
VIT-208	ENST00000497382	ENOX2	Q16206	610 aa	Known RBP	11	□□□□□ -0.65
VIT-208	ENST00000497382	RRP12	Q5JTH9	1297 aa	Known RBP	11	□□□□□ -0.65
VIT-208	ENST00000497382	IQCE	Q6IPM2	695 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	SDE2	Q6IQ49	451 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	CCBE1	Q6UXH8	406 aa	Predicted RBP	11	□□□□□ -0.65
VIT-208	ENST00000497382	CTCFL	Q8NI51	663 aa	Predicted RBP	11	□□□□□ -0.65
VIT-208	ENST00000497382	XPO4	Q9C0E2	1151 aa	Known RBP	11	□□□□□ -0.65
VIT-208	ENST00000497382	DCAF16	Q9NXF7	216 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	MRFAP1	Q9Y605	127 aa		11	□□□□□ -0.65
VIT-208	ENST00000497382	LINC00854	A0A1B0GVQ3	168 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	NPHP1	O15259	732 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	FGFR1OP	O95684	399 aa	Known RBP	10.99	□□□□□ -0.65
VIT-208	ENST00000497382	RPL17	P18621	184 aa	Known RBP	10.99	□□□□□ -0.65
VIT-208	ENST00000497382	MAN1A1	P33908	653 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	MAGEA10	P43363	369 aa	Predicted RBP	10.99	□□□□□ -0.65
VIT-208	ENST00000497382	FKBP5	Q13451	457 aa	Predicted RBP	10.99	□□□□□ -0.65
VIT-208	ENST00000497382	MTHFD1L	Q6UB35	978 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	SEPT14	Q6ZU15	432 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	FAM76A	Q8TAV0	307 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	HELQ	Q8TDG4	1101 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	ZFPM2	Q8WW38	1151 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	HPS3	Q969F9	1004 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	INCENP	Q9NQS7	918 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	LRRFIP2	Q9Y608	721 aa	Known RBP	10.99	□□□□□ -0.65
VIT-208	ENST00000497382	SPTLC2	O15270	562 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	EIF4B	P23588	611 aa	Known RBP	10.99	□□□□□ -0.65
VIT-208	ENST00000497382	PDE4B	Q07343	736 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	ADCY1	Q08828	1119 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	NCBP1	Q09161	790 aa	Known RBP	10.99	□□□□□ -0.65
VIT-208	ENST00000497382	VPS72	Q15906	364 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	KIAA0825	Q8IV33	1275 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	SPC24	Q8NBT2	197 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	CAPS2	Q9BXY5	557 aa		10.99	□□□□□ -0.65
VIT-208	ENST00000497382	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.99	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms