RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 UBTFL1P0CB47 393 aaPredicted RBP21■□□□□ 0.95
TRAPPC3-207ENST00000497251 PRMT2P55345 433 aa21■□□□□ 0.95
TRAPPC3-207ENST00000497251 TMEM106CQ9BVX2 250 aa21■□□□□ 0.95
TRAPPC3-207ENST00000497251 SMC4Q9NTJ3 1288 aa21■□□□□ 0.95
TRAPPC3-207ENST00000497251 SNCAIPQ9Y6H5 919 aa21■□□□□ 0.95
TRAPPC3-207ENST00000497251 SALL1Q9NSC2 1324 aa21■□□□□ 0.95
TRAPPC3-207ENST00000497251 OTOFQ9HC10 1997 aa20.99■□□□□ 0.95
TRAPPC3-207ENST00000497251 ATG9AQ7Z3C6 839 aa20.99■□□□□ 0.95
TRAPPC3-207ENST00000497251 TRMT2AQ8IZ69 625 aaKnown RBP20.99■□□□□ 0.95
TRAPPC3-207ENST00000497251 FAM43AQ8N2R8 423 aa20.99■□□□□ 0.95
TRAPPC3-207ENST00000497251 ZGPATQ8N5A5 531 aaKnown RBP20.99■□□□□ 0.95
TRAPPC3-207ENST00000497251 API5Q9BZZ5 524 aaKnown RBP20.99■□□□□ 0.95
TRAPPC3-207ENST00000497251 IRF6O14896 467 aa20.98■□□□□ 0.95
TRAPPC3-207ENST00000497251 IL15P40933 162 aaPredicted RBP20.98■□□□□ 0.95
TRAPPC3-207ENST00000497251 CACNB3P54284 484 aa20.98■□□□□ 0.95
TRAPPC3-207ENST00000497251 CNKSR2Q8WXI2 1034 aa20.98■□□□□ 0.95
TRAPPC3-207ENST00000497251 ZNF112Q9UJU3 913 aa20.98■□□□□ 0.95
TRAPPC3-207ENST00000497251 DENND2AQ9ULE3 1009 aa20.98■□□□□ 0.95
TRAPPC3-207ENST00000497251 LDHBP07195 334 aaKnown RBP20.97■□□□□ 0.95
TRAPPC3-207ENST00000497251 ATP2B3Q16720 1220 aa20.97■□□□□ 0.95
TRAPPC3-207ENST00000497251 ZNF333Q96JL9 665 aa20.97■□□□□ 0.95
TRAPPC3-207ENST00000497251 SLC9C1Q4G0N8 1177 aa20.96■□□□□ 0.95
TRAPPC3-207ENST00000497251 SLF2Q8IX21 1173 aa20.96■□□□□ 0.95
TRAPPC3-207ENST00000497251 ZKSCAN4Q969J2 545 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC3-207ENST00000497251 POTEFA5A3E0 1075 aa20.95■□□□□ 0.94
TRAPPC3-207ENST00000497251 BTBD19C9JJ37 291 aa20.95■□□□□ 0.94
TRAPPC3-207ENST00000497251 NOL9Q5SY16 702 aaKnown RBP20.95■□□□□ 0.94
TRAPPC3-207ENST00000497251 ANKRD23Q86SG2 305 aa20.95■□□□□ 0.94
TRAPPC3-207ENST00000497251 COPRSQ9NQ92 184 aa20.95■□□□□ 0.94
TRAPPC3-207ENST00000497251 KCNH4Q9UQ05 1017 aa20.95■□□□□ 0.94
TRAPPC3-207ENST00000497251 DAGLAQ9Y4D2 1042 aa20.95■□□□□ 0.94
TRAPPC3-207ENST00000497251 RBBP6Q7Z6E9 1792 aaKnown RBP20.95■□□□□ 0.94
TRAPPC3-207ENST00000497251 CENPFP49454 3210 aa20.94■□□□□ 0.94
TRAPPC3-207ENST00000497251 HOXD10P28358 340 aa20.94■□□□□ 0.94
TRAPPC3-207ENST00000497251 LACTBP83111 547 aaPredicted RBP20.94■□□□□ 0.94
TRAPPC3-207ENST00000497251 CDC42EP5Q6NZY7 148 aa20.94■□□□□ 0.94
TRAPPC3-207ENST00000497251 ARHGAP45Q92619 1136 aa20.94■□□□□ 0.94
TRAPPC3-207ENST00000497251 PDS5AQ29RF7 1337 aaKnown RBP20.94■□□□□ 0.94
TRAPPC3-207ENST00000497251 CXCL11O14625 94 aa20.92■□□□□ 0.94
TRAPPC3-207ENST00000497251 ENTPD3O75355 529 aa20.92■□□□□ 0.94
TRAPPC3-207ENST00000497251 SPTY2D1Q68D10 685 aaPredicted RBP20.92■□□□□ 0.94
TRAPPC3-207ENST00000497251 MIGA2Q7L4E1 593 aa20.92■□□□□ 0.94
TRAPPC3-207ENST00000497251 FAM163AQ96GL9 167 aaPredicted RBP20.92■□□□□ 0.94
TRAPPC3-207ENST00000497251 IDI2Q9BXS1 227 aa20.92■□□□□ 0.94
TRAPPC3-207ENST00000497251 USP40Q9NVE5 1235 aa20.92■□□□□ 0.94
TRAPPC3-207ENST00000497251 NOB1Q9ULX3 412 aaKnown RBP20.92■□□□□ 0.94
TRAPPC3-207ENST00000497251 AKAP2Q9Y2D5 859 aa20.92■□□□□ 0.94
TRAPPC3-207ENST00000497251 PTCH2Q9Y6C5 1203 aa20.92■□□□□ 0.94
TRAPPC3-207ENST00000497251 MKI67P46013 3256 aaKnown RBP20.92■□□□□ 0.94
TRAPPC3-207ENST00000497251 PRDX5P30044 214 aa20.91■□□□□ 0.94
TRAPPC3-207ENST00000497251 C17orf99Q6UX52 265 aa20.91■□□□□ 0.94
TRAPPC3-207ENST00000497251 SIL1Q9H173 461 aa20.91■□□□□ 0.94
TRAPPC3-207ENST00000497251 MAP4K4O95819 1239 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC3-207ENST00000497251 GNAI3P08754 354 aa20.9■□□□□ 0.94
TRAPPC3-207ENST00000497251 INPP5BP32019 993 aa20.9■□□□□ 0.94
TRAPPC3-207ENST00000497251 CAP1Q01518 475 aa20.9■□□□□ 0.94
TRAPPC3-207ENST00000497251 DIXDC1Q155Q3 683 aa20.9■□□□□ 0.94
TRAPPC3-207ENST00000497251 CDCA7LQ96GN5 454 aa20.9■□□□□ 0.94
TRAPPC3-207ENST00000497251 MYH13Q9UKX3 1938 aa20.9■□□□□ 0.94
TRAPPC3-207ENST00000497251 GAKO14976 1311 aa20.89■□□□□ 0.93
TRAPPC3-207ENST00000497251 EN2P19622 333 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC3-207ENST00000497251 TCP10Q12799 353 aa20.89■□□□□ 0.93
TRAPPC3-207ENST00000497251 SLC4A8Q2Y0W8 1093 aa20.89■□□□□ 0.93
TRAPPC3-207ENST00000497251 CCDC102BQ68D86 513 aa20.89■□□□□ 0.93
TRAPPC3-207ENST00000497251 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC3-207ENST00000497251 FAM198AQ9UFP1 575 aa20.89■□□□□ 0.93
TRAPPC3-207ENST00000497251 LRRFIP2Q9Y608 721 aaKnown RBP20.89■□□□□ 0.93
TRAPPC3-207ENST00000497251 PDHXO00330 501 aa20.88■□□□□ 0.93
TRAPPC3-207ENST00000497251 CAPN2P17655 700 aa20.88■□□□□ 0.93
TRAPPC3-207ENST00000497251 PHKA1P46020 1223 aa20.88■□□□□ 0.93
TRAPPC3-207ENST00000497251 MAP3K10Q02779 954 aa20.88■□□□□ 0.93
TRAPPC3-207ENST00000497251 NFIAQ12857 509 aa20.88■□□□□ 0.93
TRAPPC3-207ENST00000497251 MTX1Q13505 466 aa20.88■□□□□ 0.93
TRAPPC3-207ENST00000497251 FASTKD5Q7L8L6 764 aaKnown RBP20.88■□□□□ 0.93
TRAPPC3-207ENST00000497251 PARK7Q99497 189 aaKnown RBP20.88■□□□□ 0.93
TRAPPC3-207ENST00000497251 CEP290O15078 2479 aa20.87■□□□□ 0.93
TRAPPC3-207ENST00000497251 AK9Q5TCS8 1911 aa20.87■□□□□ 0.93
TRAPPC3-207ENST00000497251 IPO8O15397 1037 aaKnown RBP20.87■□□□□ 0.93
TRAPPC3-207ENST00000497251 NPM3O75607 178 aaKnown RBP20.87■□□□□ 0.93
TRAPPC3-207ENST00000497251 MVPQ14764 893 aaKnown RBP20.87■□□□□ 0.93
TRAPPC3-207ENST00000497251 NKX2-3Q8TAU0 364 aa20.87■□□□□ 0.93
TRAPPC3-207ENST00000497251 PICK1Q9NRD5 415 aa20.87■□□□□ 0.93
TRAPPC3-207ENST00000497251 SRRDQ9UH36 339 aa20.87■□□□□ 0.93
TRAPPC3-207ENST00000497251 SLC45A1Q9Y2W3 748 aa20.87■□□□□ 0.93
TRAPPC3-207ENST00000497251 DZIP1Q86YF9 867 aaKnown RBP20.86■□□□□ 0.93
TRAPPC3-207ENST00000497251 CCER2I3L3R5 266 aa20.85■□□□□ 0.93
TRAPPC3-207ENST00000497251 CTNND1O60716 968 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-207ENST00000497251 PSMC4P43686 418 aa20.85■□□□□ 0.93
TRAPPC3-207ENST00000497251 RARSP54136 660 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-207ENST00000497251 SCYL3Q8IZE3 742 aa20.85■□□□□ 0.93
TRAPPC3-207ENST00000497251 ADGRA2Q96PE1 1338 aa20.84■□□□□ 0.93
TRAPPC3-207ENST00000497251 PHF20L1A8MW92 1017 aa20.84■□□□□ 0.93
TRAPPC3-207ENST00000497251 RGS3P49796 1198 aa20.84■□□□□ 0.93
TRAPPC3-207ENST00000497251 MOGSQ13724 837 aa20.84■□□□□ 0.93
TRAPPC3-207ENST00000497251 RASGRF1Q13972 1273 aa20.84■□□□□ 0.93
TRAPPC3-207ENST00000497251 BRCA2P51587 3418 aa20.84■□□□□ 0.93
TRAPPC3-207ENST00000497251 SRGAP3O43295 1099 aa20.83■□□□□ 0.93
TRAPPC3-207ENST00000497251 TBC1D12O60347 775 aa20.83■□□□□ 0.93
TRAPPC3-207ENST00000497251 IGSF3O75054 1194 aa20.83■□□□□ 0.93
TRAPPC3-207ENST00000497251 LDHCP07864 332 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms