RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 KSR1Q8IVT5 923 aa6.44□□□□□ -1.38
VPS26A-208ENST00000497022 GLIS3Q8NEA6 775 aa6.44□□□□□ -1.38
VPS26A-208ENST00000497022 BHLHE22Q8NFJ8 381 aaPredicted RBP6.44□□□□□ -1.38
VPS26A-208ENST00000497022 FAM168AQ92567 244 aa6.44□□□□□ -1.38
VPS26A-208ENST00000497022 BRPF3Q9ULD4 1205 aa6.44□□□□□ -1.38
VPS26A-208ENST00000497022 CYP27C1Q4G0S4 372 aa6.43□□□□□ -1.38
VPS26A-208ENST00000497022 CCER1Q8TC90 406 aaPredicted RBP6.43□□□□□ -1.38
VPS26A-208ENST00000497022 SLC38A3Q99624 504 aa6.43□□□□□ -1.38
VPS26A-208ENST00000497022 RC3H2Q9HBD1 1191 aaKnown RBP6.43□□□□□ -1.38
VPS26A-208ENST00000497022 ZFYVE28Q9HCC9 887 aa6.43□□□□□ -1.38
VPS26A-208ENST00000497022 C1GALT1Q9NS00 363 aa6.43□□□□□ -1.38
VPS26A-208ENST00000497022 FAM105AQ9NUU6 356 aa6.43□□□□□ -1.38
VPS26A-208ENST00000497022 MAOBP27338 520 aa6.42□□□□□ -1.38
VPS26A-208ENST00000497022 DYMQ7RTS9 669 aa6.42□□□□□ -1.38
VPS26A-208ENST00000497022 AMOTL2Q9Y2J4 779 aa6.42□□□□□ -1.38
VPS26A-208ENST00000497022 NDUFB5O43674 189 aa6.41□□□□□ -1.38
VPS26A-208ENST00000497022 ASPAP45381 313 aa6.41□□□□□ -1.38
VPS26A-208ENST00000497022 POU4F3Q15319 338 aa6.41□□□□□ -1.38
VPS26A-208ENST00000497022 AKAP4Q5JQC9 854 aa6.41□□□□□ -1.38
VPS26A-208ENST00000497022 PEAR1Q5VY43 1037 aaPredicted RBP6.41□□□□□ -1.38
VPS26A-208ENST00000497022 NETO1Q8TDF5 533 aa6.41□□□□□ -1.38
VPS26A-208ENST00000497022 CLEC4MQ9H2X3 399 aaPredicted RBP6.41□□□□□ -1.38
VPS26A-208ENST00000497022 AP4E1Q9UPM8 1137 aa6.41□□□□□ -1.38
VPS26A-208ENST00000497022 SYNGAP1Q96PV0 1343 aa6.41□□□□□ -1.38
VPS26A-208ENST00000497022 BRD1O95696 1058 aa6.4□□□□□ -1.38
VPS26A-208ENST00000497022 PCDH1Q08174 1060 aa6.4□□□□□ -1.38
VPS26A-208ENST00000497022 CITED4Q96RK1 184 aa6.4□□□□□ -1.38
VPS26A-208ENST00000497022 LATS2Q9NRM7 1088 aa6.4□□□□□ -1.38
VPS26A-208ENST00000497022 RAD18Q9NS91 495 aa6.4□□□□□ -1.38
VPS26A-208ENST00000497022 VAV3Q9UKW4 847 aa6.4□□□□□ -1.38
VPS26A-208ENST00000497022 POLR3DP05423 398 aaPredicted RBP6.39□□□□□ -1.39
VPS26A-208ENST00000497022 CTSBP07858 339 aa6.39□□□□□ -1.39
VPS26A-208ENST00000497022 RNASE1P07998 156 aaKnown RBP6.39□□□□□ -1.39
VPS26A-208ENST00000497022 PDE3BQ13370 1112 aa6.39□□□□□ -1.39
VPS26A-208ENST00000497022 DDX54Q8TDD1 881 aaKnown RBP6.39□□□□□ -1.39
VPS26A-208ENST00000497022 FAM84AQ96KN4 292 aa6.39□□□□□ -1.39
VPS26A-208ENST00000497022 FAM129BQ96TA1 746 aa6.39□□□□□ -1.39
VPS26A-208ENST00000497022 MBNL3Q9NUK0 354 aaKnown RBP6.39□□□□□ -1.39
VPS26A-208ENST00000497022 GNEQ9Y223 722 aaKnown RBP6.39□□□□□ -1.39
VPS26A-208ENST00000497022 DAGLAQ9Y4D2 1042 aa6.39□□□□□ -1.39
VPS26A-208ENST00000497022 A0A096LPE4 126 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 A0A1W2PPZ6 126 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 SOWAHDA6NJG2 315 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 DYNC1LI2O43237 492 aaPredicted RBP6.38□□□□□ -1.39
VPS26A-208ENST00000497022 NEFLP07196 543 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 CD8BP10966 210 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 PRKCQQ04759 706 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 BNIP3Q12983 259 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 ZNF423Q2M1K9 1284 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 GALNT12Q8IXK2 581 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 CORO1BQ9BR76 489 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 KRTAP4-5Q9BYR2 181 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 MKNK2Q9HBH9 465 aa6.38□□□□□ -1.39
VPS26A-208ENST00000497022 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
VPS26A-208ENST00000497022 METTL12A8MUP2 240 aa6.37□□□□□ -1.39
VPS26A-208ENST00000497022 IGHA2P01877 340 aa6.37□□□□□ -1.39
VPS26A-208ENST00000497022 MESP2Q0VG99 397 aa6.37□□□□□ -1.39
VPS26A-208ENST00000497022 USPL1Q5W0Q7 1092 aa6.37□□□□□ -1.39
VPS26A-208ENST00000497022 CCNJLQ8IV13 435 aa6.37□□□□□ -1.39
VPS26A-208ENST00000497022 PLD6Q8N2A8 252 aaKnown RBP6.37□□□□□ -1.39
VPS26A-208ENST00000497022 LRRN4CLQ8ND94 238 aa6.37□□□□□ -1.39
VPS26A-208ENST00000497022 PI4K2BQ8TCG2 481 aa6.37□□□□□ -1.39
VPS26A-208ENST00000497022 ADAMTS6Q9UKP5 1117 aa6.37□□□□□ -1.39
VPS26A-208ENST00000497022 A0A1W2PP55 124 aa6.36□□□□□ -1.39
VPS26A-208ENST00000497022 ORC1Q13415 861 aa6.36□□□□□ -1.39
VPS26A-208ENST00000497022 TRIM56Q9BRZ2 755 aaKnown RBP6.36□□□□□ -1.39
VPS26A-208ENST00000497022 RBCK1Q9BYM8 510 aa6.36□□□□□ -1.39
VPS26A-208ENST00000497022 FAM53CQ9NYF3 392 aa6.36□□□□□ -1.39
VPS26A-208ENST00000497022 GPR182O15218 404 aa6.35□□□□□ -1.39
VPS26A-208ENST00000497022 AOC2O75106 756 aa6.35□□□□□ -1.39
VPS26A-208ENST00000497022 CPNE3O75131 537 aaKnown RBP6.35□□□□□ -1.39
VPS26A-208ENST00000497022 B3GALT4O96024 378 aa6.35□□□□□ -1.39
VPS26A-208ENST00000497022 IFI16Q16666 785 aaKnown RBP6.35□□□□□ -1.39
VPS26A-208ENST00000497022 FLAD1Q8NFF5 587 aa6.35□□□□□ -1.39
VPS26A-208ENST00000497022 TMC1Q8TDI8 760 aa6.35□□□□□ -1.39
VPS26A-208ENST00000497022 TOX2Q96NM4 488 aa6.35□□□□□ -1.39
VPS26A-208ENST00000497022 NIF3L1Q9GZT8 377 aa6.35□□□□□ -1.39
VPS26A-208ENST00000497022 FAM87AP0C7U9 286 aa6.34□□□□□ -1.39
VPS26A-208ENST00000497022 ANGEL2Q5VTE6 544 aaKnown RBP6.34□□□□□ -1.39
VPS26A-208ENST00000497022 KIAA0319Q5VV43 1072 aa6.34□□□□□ -1.39
VPS26A-208ENST00000497022 CILP2Q8IUL8 1156 aa6.34□□□□□ -1.39
VPS26A-208ENST00000497022 HRASLS5Q96KN8 279 aa6.34□□□□□ -1.39
VPS26A-208ENST00000497022 TCF12Q99081 682 aa6.34□□□□□ -1.39
VPS26A-208ENST00000497022 WDR18Q9BV38 432 aa6.34□□□□□ -1.39
VPS26A-208ENST00000497022 LIN7BQ9HAP6 207 aa6.34□□□□□ -1.39
VPS26A-208ENST00000497022 BIN2Q9UBW5 565 aaPredicted RBP6.34□□□□□ -1.39
VPS26A-208ENST00000497022 LRRC10BA6NIK2 292 aa6.33□□□□□ -1.4
VPS26A-208ENST00000497022 EIF1AYO14602 144 aaKnown RBP6.33□□□□□ -1.4
VPS26A-208ENST00000497022 GRIA4P48058 902 aa6.33□□□□□ -1.4
VPS26A-208ENST00000497022 SPRED3Q2MJR0 410 aa6.33□□□□□ -1.4
VPS26A-208ENST00000497022 SLC23A3Q6PIS1 610 aa6.33□□□□□ -1.4
VPS26A-208ENST00000497022 FAM181AQ8N9Y4 354 aa6.33□□□□□ -1.4
VPS26A-208ENST00000497022 DMRTB1Q96MA1 342 aa6.33□□□□□ -1.4
VPS26A-208ENST00000497022 DNAJC25Q9H1X3 360 aa6.33□□□□□ -1.4
VPS26A-208ENST00000497022 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 ECEL1O95672 775 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 TSPAN15O95858 294 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 AP3B2Q13367 1082 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 PDE3AQ14432 1141 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms