RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 IFNL1Q8IU54 200 aa17.71■□□□□ 0.43
VTI1A-209ENST00000496445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.71■□□□□ 0.43
VTI1A-209ENST00000496445 ELP3Q9H9T3 547 aa17.71■□□□□ 0.43
VTI1A-209ENST00000496445 GPR25O00155 361 aa17.7■□□□□ 0.42
VTI1A-209ENST00000496445 VGLL4Q14135 290 aa17.7■□□□□ 0.42
VTI1A-209ENST00000496445 NOM1Q5C9Z4 860 aaKnown RBP17.7■□□□□ 0.42
VTI1A-209ENST00000496445 XAGE2Q96GT9 111 aa17.7■□□□□ 0.42
VTI1A-209ENST00000496445 TMOD2Q9NZR1 351 aa17.7■□□□□ 0.42
VTI1A-209ENST00000496445 AK9Q5TCS8 1911 aa17.7■□□□□ 0.42
VTI1A-209ENST00000496445 PDS5AQ29RF7 1337 aaKnown RBP17.7■□□□□ 0.42
VTI1A-209ENST00000496445 LDHBP07195 334 aaKnown RBP17.69■□□□□ 0.42
VTI1A-209ENST00000496445 RLBP1P12271 317 aa17.69■□□□□ 0.42
VTI1A-209ENST00000496445 OPTNQ96CV9 577 aa17.69■□□□□ 0.42
VTI1A-209ENST00000496445 MAST2Q6P0Q8 1798 aa17.68■□□□□ 0.42
VTI1A-209ENST00000496445 RFX7Q2KHR2 1363 aa17.68■□□□□ 0.42
VTI1A-209ENST00000496445 BRCA2P51587 3418 aa17.68■□□□□ 0.42
VTI1A-209ENST00000496445 INHBEP58166 350 aa17.68■□□□□ 0.42
VTI1A-209ENST00000496445 MAP3K9P80192 1104 aa17.68■□□□□ 0.42
VTI1A-209ENST00000496445 NFIAQ12857 509 aa17.68■□□□□ 0.42
VTI1A-209ENST00000496445 CDC42EP5Q6NZY7 148 aa17.68■□□□□ 0.42
VTI1A-209ENST00000496445 AKAP2Q9Y2D5 859 aa17.68■□□□□ 0.42
VTI1A-209ENST00000496445 TESPA1A2RU30 521 aaPredicted RBP17.67■□□□□ 0.42
VTI1A-209ENST00000496445 ALDH1A1P00352 501 aa17.67■□□□□ 0.42
VTI1A-209ENST00000496445 POLA2Q14181 598 aa17.67■□□□□ 0.42
VTI1A-209ENST00000496445 PTPN18Q99952 460 aa17.67■□□□□ 0.42
VTI1A-209ENST00000496445 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
VTI1A-209ENST00000496445 SNCAIPQ9Y6H5 919 aa17.67■□□□□ 0.42
VTI1A-209ENST00000496445 GAKO14976 1311 aa17.67■□□□□ 0.42
VTI1A-209ENST00000496445 MVPQ14764 893 aaKnown RBP17.66■□□□□ 0.42
VTI1A-209ENST00000496445 FTSJ3Q8IY81 847 aaKnown RBP17.66■□□□□ 0.42
VTI1A-209ENST00000496445 ZGPATQ8N5A5 531 aaKnown RBP17.66■□□□□ 0.42
VTI1A-209ENST00000496445 FAM151AQ8WW52 585 aa17.66■□□□□ 0.42
VTI1A-209ENST00000496445 MS4A4AQ96JQ5 239 aa17.66■□□□□ 0.42
VTI1A-209ENST00000496445 FAM198AQ9UFP1 575 aa17.66■□□□□ 0.42
VTI1A-209ENST00000496445 MYO5AQ9Y4I1 1855 aaKnown RBP17.65■□□□□ 0.42
VTI1A-209ENST00000496445 FKTNO75072 461 aa17.65■□□□□ 0.42
VTI1A-209ENST00000496445 PI16Q6UXB8 463 aa17.65■□□□□ 0.42
VTI1A-209ENST00000496445 SSH3Q8TE77 659 aa17.65■□□□□ 0.42
VTI1A-209ENST00000496445 NEUROD6Q96NK8 337 aa17.65■□□□□ 0.42
VTI1A-209ENST00000496445 WRNIP1Q96S55 665 aa17.65■□□□□ 0.42
VTI1A-209ENST00000496445 CSADQ9Y600 493 aa17.65■□□□□ 0.42
VTI1A-209ENST00000496445 ATRNL1Q5VV63 1379 aa17.65■□□□□ 0.42
VTI1A-209ENST00000496445 SPDYE5A6NIY4 337 aa17.64■□□□□ 0.41
VTI1A-209ENST00000496445 ARID4AP29374 1257 aaPredicted RBP17.64■□□□□ 0.41
VTI1A-209ENST00000496445 RGS19P49795 217 aa17.64■□□□□ 0.41
VTI1A-209ENST00000496445 TCP10Q12799 353 aa17.64■□□□□ 0.41
VTI1A-209ENST00000496445 G3BP1Q13283 466 aaKnown RBP eCLIP17.64■□□□□ 0.41
VTI1A-209ENST00000496445 CRHR2Q13324 411 aa17.64■□□□□ 0.41
VTI1A-209ENST00000496445 ITPRIPQ8IWB1 547 aa17.64■□□□□ 0.41
VTI1A-209ENST00000496445 ZNF384Q8TF68 577 aa17.64■□□□□ 0.41
VTI1A-209ENST00000496445 BRI3BPQ8WY22 251 aa17.64■□□□□ 0.41
VTI1A-209ENST00000496445 ZKSCAN4Q969J2 545 aaPredicted RBP17.64■□□□□ 0.41
VTI1A-209ENST00000496445 OTUD5Q96G74 571 aa17.64■□□□□ 0.41
VTI1A-209ENST00000496445 USP40Q9NVE5 1235 aa17.64■□□□□ 0.41
VTI1A-209ENST00000496445 HMG20BQ9P0W2 317 aa17.64■□□□□ 0.41
VTI1A-209ENST00000496445 ABCF2Q9UG63 623 aa17.64■□□□□ 0.41
VTI1A-209ENST00000496445 ATP8B2P98198 1209 aa17.63■□□□□ 0.41
VTI1A-209ENST00000496445 DCAF15Q66K64 600 aa17.63■□□□□ 0.41
VTI1A-209ENST00000496445 MIGA2Q7L4E1 593 aa17.63■□□□□ 0.41
VTI1A-209ENST00000496445 DZIP1Q86YF9 867 aaKnown RBP17.63■□□□□ 0.41
VTI1A-209ENST00000496445 ZFPM1Q8IX07 1006 aa17.63■□□□□ 0.41
VTI1A-209ENST00000496445 HOOK2Q96ED9 719 aa17.63■□□□□ 0.41
VTI1A-209ENST00000496445 HPS5Q9UPZ3 1129 aa17.63■□□□□ 0.41
VTI1A-209ENST00000496445 CDK5RAP2Q96SN8 1893 aa17.63■□□□□ 0.41
VTI1A-209ENST00000496445 CCL15-CCL14A0A0B4J2E2 113 aa17.62■□□□□ 0.41
VTI1A-209ENST00000496445 ZBTB7BO15156 539 aaPredicted RBP17.62■□□□□ 0.41
VTI1A-209ENST00000496445 INPP5BP32019 993 aa17.62■□□□□ 0.41
VTI1A-209ENST00000496445 MCAMP43121 646 aa17.62■□□□□ 0.41
VTI1A-209ENST00000496445 CCL15Q16663 113 aa17.62■□□□□ 0.41
VTI1A-209ENST00000496445 SPATA5Q8NB90 893 aa17.62■□□□□ 0.41
VTI1A-209ENST00000496445 ZNF341Q9BYN7 854 aa17.62■□□□□ 0.41
VTI1A-209ENST00000496445 ZSWIM8A7E2V4 1837 aa17.62■□□□□ 0.41
VTI1A-209ENST00000496445 MROH7-TTC4A0A0A0MT08 1334 aa17.62■□□□□ 0.41
VTI1A-209ENST00000496445 DOCK1Q14185 1865 aa17.62■□□□□ 0.41
VTI1A-209ENST00000496445 RGS3P49796 1198 aa17.61■□□□□ 0.41
VTI1A-209ENST00000496445 GTF2A2P52657 109 aa17.61■□□□□ 0.41
VTI1A-209ENST00000496445 MECOMQ03112 1051 aa17.61■□□□□ 0.41
VTI1A-209ENST00000496445 PKN2Q16513 984 aaKnown RBP17.61■□□□□ 0.41
VTI1A-209ENST00000496445 ERO1BQ86YB8 467 aa17.61■□□□□ 0.41
VTI1A-209ENST00000496445 FAM163AQ96GL9 167 aaPredicted RBP17.61■□□□□ 0.41
VTI1A-209ENST00000496445 IDI2Q9BXS1 227 aa17.61■□□□□ 0.41
VTI1A-209ENST00000496445 ZNF112Q9UJU3 913 aa17.61■□□□□ 0.41
VTI1A-209ENST00000496445 FOCADQ5VW36 1801 aa17.61■□□□□ 0.41
VTI1A-209ENST00000496445 PHIPQ8WWQ0 1821 aa17.61■□□□□ 0.41
VTI1A-209ENST00000496445 PTPRFP10586 1907 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 WDHD1O75717 1129 aaPredicted RBP17.6■□□□□ 0.41
VTI1A-209ENST00000496445 BTDP43251 543 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 SOX10P56693 466 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 TNNI3KQ59H18 835 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 GORABQ5T7V8 394 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 SPTY2D1Q68D10 685 aaPredicted RBP17.6■□□□□ 0.41
VTI1A-209ENST00000496445 OTUD7BQ6GQQ9 843 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 TBC1D9Q6ZT07 1266 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 ERICH6Q7L0X2 663 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 SH3BP5LQ7L8J4 393 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 FAM43AQ8N2R8 423 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 PANK1Q8TE04 598 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 NSUN4Q96CB9 384 aaKnown RBP17.6■□□□□ 0.41
VTI1A-209ENST00000496445 GPR108Q9NPR9 543 aa17.6■□□□□ 0.41
VTI1A-209ENST00000496445 DDX4Q9NQI0 724 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms