RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 ADORA1P30542 326 aa16.24■□□□□ 0.19
USF1-207ENST00000496363 PHKA1P46020 1223 aa16.24■□□□□ 0.19
USF1-207ENST00000496363 CDC42EP5Q6NZY7 148 aa16.24■□□□□ 0.19
USF1-207ENST00000496363 MEIS3Q99687 375 aa16.24■□□□□ 0.19
USF1-207ENST00000496363 API5Q9BZZ5 524 aaKnown RBP16.24■□□□□ 0.19
USF1-207ENST00000496363 CEP126Q9P2H0 1117 aa16.24■□□□□ 0.19
USF1-207ENST00000496363 POTEFA5A3E0 1075 aa16.23■□□□□ 0.19
USF1-207ENST00000496363 CT47B1P0C2W7 299 aaPredicted RBP16.23■□□□□ 0.19
USF1-207ENST00000496363 INPP5BP32019 993 aa16.23■□□□□ 0.19
USF1-207ENST00000496363 TCP10Q12799 353 aa16.23■□□□□ 0.19
USF1-207ENST00000496363 NFIAQ12857 509 aa16.23■□□□□ 0.19
USF1-207ENST00000496363 ERO1BQ86YB8 467 aa16.23■□□□□ 0.19
USF1-207ENST00000496363 ZFYVE28Q9HCC9 887 aa16.23■□□□□ 0.19
USF1-207ENST00000496363 FBXO3Q9UK99 471 aa16.23■□□□□ 0.19
USF1-207ENST00000496363 DOCK2Q92608 1830 aa16.23■□□□□ 0.19
USF1-207ENST00000496363 IRF6O14896 467 aa16.22■□□□□ 0.19
USF1-207ENST00000496363 RARSP54136 660 aaKnown RBP16.22■□□□□ 0.19
USF1-207ENST00000496363 PRPF38BQ5VTL8 546 aaKnown RBP16.22■□□□□ 0.19
USF1-207ENST00000496363 DCAF15Q66K64 600 aa16.22■□□□□ 0.19
USF1-207ENST00000496363 FAM151AQ8WW52 585 aa16.22■□□□□ 0.19
USF1-207ENST00000496363 ZNF341Q9BYN7 854 aa16.22■□□□□ 0.19
USF1-207ENST00000496363 BTBD19C9JJ37 291 aa16.21■□□□□ 0.19
USF1-207ENST00000496363 LDHBP07195 334 aaKnown RBP16.21■□□□□ 0.19
USF1-207ENST00000496363 CETPP11597 493 aa16.21■□□□□ 0.19
USF1-207ENST00000496363 IL15P40933 162 aaPredicted RBP16.21■□□□□ 0.19
USF1-207ENST00000496363 PPIL2Q13356 520 aa16.21■□□□□ 0.19
USF1-207ENST00000496363 HOOK2Q96ED9 719 aa16.21■□□□□ 0.19
USF1-207ENST00000496363 COPRSQ9NQ92 184 aa16.21■□□□□ 0.19
USF1-207ENST00000496363 GNL3LQ9NVN8 582 aaKnown RBP16.21■□□□□ 0.19
USF1-207ENST00000496363 FAM198AQ9UFP1 575 aa16.21■□□□□ 0.19
USF1-207ENST00000496363 SNAPC2Q13487 334 aa16.2■□□□□ 0.18
USF1-207ENST00000496363 ZFPM1Q8IX07 1006 aa16.2■□□□□ 0.18
USF1-207ENST00000496363 ARMC5Q96C12 935 aa16.2■□□□□ 0.18
USF1-207ENST00000496363 ARHGAP39Q9C0H5 1083 aa16.2■□□□□ 0.18
USF1-207ENST00000496363 USP40Q9NVE5 1235 aa16.2■□□□□ 0.18
USF1-207ENST00000496363 DENND2AQ9ULE3 1009 aa16.2■□□□□ 0.18
USF1-207ENST00000496363 SALL1Q9NSC2 1324 aa16.19■□□□□ 0.18
USF1-207ENST00000496363 CCDC102BQ68D86 513 aa16.19■□□□□ 0.18
USF1-207ENST00000496363 INTS3Q68E01 1043 aaKnown RBP16.19■□□□□ 0.18
USF1-207ENST00000496363 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.19■□□□□ 0.18
USF1-207ENST00000496363 TNNQ9UQP3 1299 aa16.19■□□□□ 0.18
USF1-207ENST00000496363 PTCH2Q9Y6C5 1203 aa16.19■□□□□ 0.18
USF1-207ENST00000496363 SEMA3EO15041 775 aa16.18■□□□□ 0.18
USF1-207ENST00000496363 ECM2O94769 699 aaPredicted RBP16.18■□□□□ 0.18
USF1-207ENST00000496363 TIMM10P62072 90 aa16.18■□□□□ 0.18
USF1-207ENST00000496363 PPATQ06203 517 aa16.18■□□□□ 0.18
USF1-207ENST00000496363 RASGRF1Q13972 1273 aa16.18■□□□□ 0.18
USF1-207ENST00000496363 ZNF112Q9UJU3 913 aa16.18■□□□□ 0.18
USF1-207ENST00000496363 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.18■□□□□ 0.18
USF1-207ENST00000496363 CCER2I3L3R5 266 aa16.17■□□□□ 0.18
USF1-207ENST00000496363 SRGAP3O43295 1099 aa16.17■□□□□ 0.18
USF1-207ENST00000496363 TLR2O60603 784 aa16.17■□□□□ 0.18
USF1-207ENST00000496363 EN2P19622 333 aaPredicted RBP16.17■□□□□ 0.18
USF1-207ENST00000496363 TFCP2Q12800 502 aa16.17■□□□□ 0.18
USF1-207ENST00000496363 ZCCHC17Q9NP64 241 aaKnown RBP16.17■□□□□ 0.18
USF1-207ENST00000496363 HDAC5Q9UQL6 1122 aa16.17■□□□□ 0.18
USF1-207ENST00000496363 CEP290O15078 2479 aa16.17■□□□□ 0.18
USF1-207ENST00000496363 RFX7Q2KHR2 1363 aa16.16■□□□□ 0.18
USF1-207ENST00000496363 ATRNL1Q5VV63 1379 aa16.16■□□□□ 0.18
USF1-207ENST00000496363 A0A1B0GUL7 405 aa16.16■□□□□ 0.18
USF1-207ENST00000496363 SLURP2P0DP57 97 aa16.16■□□□□ 0.18
USF1-207ENST00000496363 RGS3P49796 1198 aa16.16■□□□□ 0.18
USF1-207ENST00000496363 XAGE2Q96GT9 111 aa16.16■□□□□ 0.18
USF1-207ENST00000496363 ZNF333Q96JL9 665 aa16.16■□□□□ 0.18
USF1-207ENST00000496363 ABCF2Q9UG63 623 aa16.16■□□□□ 0.18
USF1-207ENST00000496363 GAKO14976 1311 aa16.16■□□□□ 0.18
USF1-207ENST00000496363 PTPRFP10586 1907 aa16.15■□□□□ 0.18
USF1-207ENST00000496363 WDHD1O75717 1129 aaPredicted RBP16.15■□□□□ 0.18
USF1-207ENST00000496363 MYCP01106 439 aaPredicted RBP16.15■□□□□ 0.18
USF1-207ENST00000496363 GNAI3P08754 354 aa16.15■□□□□ 0.18
USF1-207ENST00000496363 LACTBP83111 547 aaPredicted RBP16.15■□□□□ 0.18
USF1-207ENST00000496363 MOGSQ13724 837 aa16.15■□□□□ 0.18
USF1-207ENST00000496363 DOCK1Q14185 1865 aa16.15■□□□□ 0.18
USF1-207ENST00000496363 SLC9C1Q4G0N8 1177 aa16.15■□□□□ 0.18
USF1-207ENST00000496363 NOL9Q5SY16 702 aaKnown RBP16.15■□□□□ 0.18
USF1-207ENST00000496363 SH3BP5LQ7L8J4 393 aa16.15■□□□□ 0.18
USF1-207ENST00000496363 DZIP1Q86YF9 867 aaKnown RBP16.15■□□□□ 0.18
USF1-207ENST00000496363 ARHGAP45Q92619 1136 aa16.15■□□□□ 0.18
USF1-207ENST00000496363 CPA4Q9UI42 421 aa16.15■□□□□ 0.18
USF1-207ENST00000496363 KCNH4Q9UQ05 1017 aa16.15■□□□□ 0.18
USF1-207ENST00000496363 PHIPQ8WWQ0 1821 aa16.15■□□□□ 0.18
USF1-207ENST00000496363 PDHXO00330 501 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 ZBTB22O15209 634 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 BCAR3O75815 825 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 TRIM27P14373 513 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 CTGFP29279 349 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 MTX1Q13505 466 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 ARHGEF6Q15052 776 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 C17orf99Q6UX52 265 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 ANKRD23Q86SG2 305 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 ZGPATQ8N5A5 531 aaKnown RBP16.14■□□□□ 0.17
USF1-207ENST00000496363 SH3TC2Q8TF17 1288 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 IDI2Q9BXS1 227 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 DDX4Q9NQI0 724 aaKnown RBP16.14■□□□□ 0.17
USF1-207ENST00000496363 ADGRA2Q96PE1 1338 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 MGAMO43451 1857 aa16.14■□□□□ 0.17
USF1-207ENST00000496363 PHF20L1A8MW92 1017 aa16.13■□□□□ 0.17
USF1-207ENST00000496363 ENTPD3O75355 529 aa16.13■□□□□ 0.17
USF1-207ENST00000496363 BTDP43251 543 aa16.13■□□□□ 0.17
USF1-207ENST00000496363 KIF22Q14807 665 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms