RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 HMGB1P09429 215 aaKnown RBP5.92□□□□□ -1.46
VPS52-222ENST00000495981 VEGFAP15692 232 aaPredicted RBP5.92□□□□□ -1.46
VPS52-222ENST00000495981 MZF1P28698 734 aaPredicted RBP5.92□□□□□ -1.46
VPS52-222ENST00000495981 ZNF76P36508 570 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 TNNI2P48788 182 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 TGFB2P61812 414 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 AAMPQ13685 434 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 TEAD4Q15561 434 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 RC3H1Q5TC82 1133 aaKnown RBP5.92□□□□□ -1.46
VPS52-222ENST00000495981 DPH6Q7L8W6 267 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 CCDC116Q8IYX3 515 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 ANKLE1Q8NAG6 615 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 SLC43A3Q8NBI5 491 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 LINC00116Q8NCU8 138 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 EHBP1Q8NDI1 1231 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 EDEM1Q92611 657 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 EMID1Q96A84 441 aaPredicted RBP5.92□□□□□ -1.46
VPS52-222ENST00000495981 TESK2Q96S53 571 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 MRS2Q9HD23 443 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 MKI67P46013 3256 aaKnown RBP5.92□□□□□ -1.46
VPS52-222ENST00000495981 CUL9Q8IWT3 2517 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 GLTPD2A6NH11 291 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 ZBTB24O43167 697 aaPredicted RBP5.91□□□□□ -1.46
VPS52-222ENST00000495981 BRD2P25440 801 aaKnown RBP5.91□□□□□ -1.46
VPS52-222ENST00000495981 CHRNA5P30532 468 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 GNA15P30679 374 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 FGD1P98174 961 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 ORC1Q13415 861 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 ITPK1Q13572 414 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 DGKZQ13574 1117 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.91□□□□□ -1.46
VPS52-222ENST00000495981 ALDH16A1Q8IZ83 802 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 CNKSR1Q969H4 720 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 KLK14Q9P0G3 267 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 BRCA1P38398 1863 aaKnown RBP5.91□□□□□ -1.46
VPS52-222ENST00000495981 MAP3K19Q56UN5 1328 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 PASKQ96RG2 1323 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 PLEKHG2Q9H7P9 1386 aa5.91□□□□□ -1.46
VPS52-222ENST00000495981 SERTM1A2A2V5 107 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 FBLN1P23142 703 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 ZAP70P43403 619 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 RPIAP49247 311 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 ATP2B2Q01814 1243 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 DNM1Q05193 864 aaKnown RBP5.9□□□□□ -1.46
VPS52-222ENST00000495981 TLR1Q15399 786 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 RTN1Q16799 776 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 ALG1LQ6GMV1 187 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 FLAD1Q8NFF5 587 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 AIDAQ96BJ3 306 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 CSRNP1Q96S65 589 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 GMLQ99445 158 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 ESYT1Q9BSJ8 1104 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 CARD11Q9BXL7 1154 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 TANGO6Q9C0B7 1094 aa5.9□□□□□ -1.46
VPS52-222ENST00000495981 PALLDQ8WX93 1383 aa5.9□□□□□ -1.47
VPS52-222ENST00000495981 USP47Q96K76 1375 aa5.9□□□□□ -1.47
VPS52-222ENST00000495981 SMG6Q86US8 1419 aaKnown RBP5.9□□□□□ -1.47
VPS52-222ENST00000495981 ADAMTS7Q9UKP4 1686 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 TJP1Q07157 1748 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 OPLAHO14841 1288 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 HOXC9P31274 260 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 NOS2P35228 1153 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 RACK1P63244 317 aaKnown RBP5.89□□□□□ -1.47
VPS52-222ENST00000495981 NR5A1Q13285 461 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 CLN3Q13286 438 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 C11orf91Q3C1V1 193 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 FBF1Q8TES7 1133 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 DHX38Q92620 1227 aaKnown RBP5.89□□□□□ -1.47
VPS52-222ENST00000495981 LTV1Q96GA3 475 aaPredicted RBP5.89□□□□□ -1.47
VPS52-222ENST00000495981 DNAJC2Q99543 621 aaKnown RBP5.89□□□□□ -1.47
VPS52-222ENST00000495981 LNPKQ9C0E8 428 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 MCOLN1Q9GZU1 580 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 SLC12A5Q9H2X9 1139 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 GGNBP2Q9H3C7 697 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 CCSER2Q9H7U1 834 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 PRKAG2Q9UGJ0 569 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.89□□□□□ -1.47
VPS52-222ENST00000495981 HCN4Q9Y3Q4 1203 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 PARP3Q9Y6F1 533 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 AK5Q9Y6K8 562 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 TONSLQ96HA7 1378 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 NSD3Q9BZ95 1437 aa5.89□□□□□ -1.47
VPS52-222ENST00000495981 KAT6BQ8WYB5 2073 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 A6NHS1 94 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 EIF1AYO14602 144 aaKnown RBP5.88□□□□□ -1.47
VPS52-222ENST00000495981 ADH1AP07327 375 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 USP5P45974 858 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 SOX10P56693 466 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 DALRD3Q5D0E6 543 aaKnown RBP5.88□□□□□ -1.47
VPS52-222ENST00000495981 LIAT1Q6ZQX7 453 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 HDGFL2Q7Z4V5 671 aaPredicted RBP5.88□□□□□ -1.47
VPS52-222ENST00000495981 ZCRB1Q8TBF4 217 aaKnown RBP5.88□□□□□ -1.47
VPS52-222ENST00000495981 C7orf43Q8WVR3 580 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 IP6K1Q92551 441 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 IFT43Q96FT9 208 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 CRELD1Q96HD1 420 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 PHACTR1Q9C0D0 580 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 CAPN10Q9HC96 672 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 PIM2Q9P1W9 311 aa5.88□□□□□ -1.47
VPS52-222ENST00000495981 DDX41Q9UJV9 622 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms