RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 COL6A3P12111 3177 aa17.02■□□□□ 0.31
COL1A1-209ENST00000495677 ALPK3Q96L96 1907 aa17.02■□□□□ 0.31
COL1A1-209ENST00000495677 F6X3S4 739 aa17.01■□□□□ 0.31
COL1A1-209ENST00000495677 UBXN2AP68543 259 aa17.01■□□□□ 0.31
COL1A1-209ENST00000495677 HHIPL2Q6UWX4 724 aa17.01■□□□□ 0.31
COL1A1-209ENST00000495677 ZNF341Q9BYN7 854 aa17.01■□□□□ 0.31
COL1A1-209ENST00000495677 TMOD2Q9NZR1 351 aa17.01■□□□□ 0.31
COL1A1-209ENST00000495677 CPA4Q9UI42 421 aa17.01■□□□□ 0.31
COL1A1-209ENST00000495677 MAST3O60307 1309 aa17■□□□□ 0.31
COL1A1-209ENST00000495677 PDHXO00330 501 aa17■□□□□ 0.31
COL1A1-209ENST00000495677 DLL1O00548 723 aa17■□□□□ 0.31
COL1A1-209ENST00000495677 ALDH1L1O75891 902 aa17■□□□□ 0.31
COL1A1-209ENST00000495677 CCL5P13501 91 aa17■□□□□ 0.31
COL1A1-209ENST00000495677 VPS37DQ86XT2 251 aa17■□□□□ 0.31
COL1A1-209ENST00000495677 PUS3Q9BZE2 481 aaKnown RBP17■□□□□ 0.31
COL1A1-209ENST00000495677 RNF208Q9H0X6 261 aa17■□□□□ 0.31
COL1A1-209ENST00000495677 C9orf78Q9NZ63 289 aaPredicted RBP17■□□□□ 0.31
COL1A1-209ENST00000495677 MYPNQ86TC9 1320 aa16.99■□□□□ 0.31
COL1A1-209ENST00000495677 ZBTB7BO15156 539 aaPredicted RBP16.99■□□□□ 0.31
COL1A1-209ENST00000495677 FMNL1O95466 1100 aaPredicted RBP16.99■□□□□ 0.31
COL1A1-209ENST00000495677 CACNB3P54284 484 aa16.99■□□□□ 0.31
COL1A1-209ENST00000495677 MOGSQ13724 837 aa16.99■□□□□ 0.31
COL1A1-209ENST00000495677 CAVIN4Q5BKX8 364 aa16.99■□□□□ 0.31
COL1A1-209ENST00000495677 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.99■□□□□ 0.31
COL1A1-209ENST00000495677 SLC17A8Q8NDX2 589 aa16.99■□□□□ 0.31
COL1A1-209ENST00000495677 SGPL1O95470 568 aa16.98■□□□□ 0.31
COL1A1-209ENST00000495677 BCRP11274 1271 aa16.98■□□□□ 0.31
COL1A1-209ENST00000495677 INPP5BP32019 993 aa16.98■□□□□ 0.31
COL1A1-209ENST00000495677 NOL9Q5SY16 702 aaKnown RBP16.98■□□□□ 0.31
COL1A1-209ENST00000495677 SLAIN1Q8ND83 568 aa16.98■□□□□ 0.31
COL1A1-209ENST00000495677 U2AF1L4Q8WU68 220 aaKnown RBP16.98■□□□□ 0.31
COL1A1-209ENST00000495677 FAM151AQ8WW52 585 aa16.98■□□□□ 0.31
COL1A1-209ENST00000495677 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
COL1A1-209ENST00000495677 KIF16BQ96L93 1317 aa16.97■□□□□ 0.31
COL1A1-209ENST00000495677 FANCIQ9NVI1 1328 aa16.97■□□□□ 0.31
COL1A1-209ENST00000495677 CXCL11O14625 94 aa16.97■□□□□ 0.31
COL1A1-209ENST00000495677 PDE8BO95263 885 aa16.97■□□□□ 0.31
COL1A1-209ENST00000495677 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
COL1A1-209ENST00000495677 VGLL2Q8N8G2 317 aa16.97■□□□□ 0.31
COL1A1-209ENST00000495677 PHIPQ8WWQ0 1821 aa16.97■□□□□ 0.31
COL1A1-209ENST00000495677 UTYO14607 1347 aa16.96■□□□□ 0.31
COL1A1-209ENST00000495677 FRAT2O75474 233 aaPredicted RBP16.96■□□□□ 0.31
COL1A1-209ENST00000495677 FCGRTP55899 365 aa16.96■□□□□ 0.31
COL1A1-209ENST00000495677 MIGA2Q7L4E1 593 aa16.96■□□□□ 0.31
COL1A1-209ENST00000495677 PXYLP1Q8TE99 480 aa16.96■□□□□ 0.31
COL1A1-209ENST00000495677 IQSEC3Q9UPP2 1182 aaPredicted RBP16.96■□□□□ 0.31
COL1A1-209ENST00000495677 MYH2Q9UKX2 1941 aa16.96■□□□□ 0.3
COL1A1-209ENST00000495677 FARP2O94887 1054 aaPredicted RBP16.95■□□□□ 0.3
COL1A1-209ENST00000495677 PRKCZQ05513 592 aa16.95■□□□□ 0.3
COL1A1-209ENST00000495677 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
COL1A1-209ENST00000495677 RABL6Q3YEC7 729 aaPredicted RBP16.95■□□□□ 0.3
COL1A1-209ENST00000495677 GPAT2Q6NUI2 795 aa16.95■□□□□ 0.3
COL1A1-209ENST00000495677 GPR153Q6NV75 609 aa16.95■□□□□ 0.3
COL1A1-209ENST00000495677 SUCLG2Q96I99 432 aa16.95■□□□□ 0.3
COL1A1-209ENST00000495677 PARK7Q99497 189 aaKnown RBP16.95■□□□□ 0.3
COL1A1-209ENST00000495677 SRCIN1Q9C0H9 1055 aa16.95■□□□□ 0.3
COL1A1-209ENST00000495677 BIN2Q9UBW5 565 aaPredicted RBP16.95■□□□□ 0.3
COL1A1-209ENST00000495677 DOCK2Q92608 1830 aa16.95■□□□□ 0.3
COL1A1-209ENST00000495677 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
COL1A1-209ENST00000495677 IRF5Q13568 498 aa16.94■□□□□ 0.3
COL1A1-209ENST00000495677 SLC45A1Q9Y2W3 748 aa16.94■□□□□ 0.3
COL1A1-209ENST00000495677 LAMA3Q16787 3333 aa16.94■□□□□ 0.3
COL1A1-209ENST00000495677 BMP8BP34820 402 aa16.93■□□□□ 0.3
COL1A1-209ENST00000495677 BCAMP50895 628 aa16.93■□□□□ 0.3
COL1A1-209ENST00000495677 LRRC24Q50LG9 513 aa16.93■□□□□ 0.3
COL1A1-209ENST00000495677 FASTKD5Q7L8L6 764 aaKnown RBP16.93■□□□□ 0.3
COL1A1-209ENST00000495677 WDR66Q8TBY9 1149 aa16.93■□□□□ 0.3
COL1A1-209ENST00000495677 UNC93B1Q9H1C4 597 aa16.93■□□□□ 0.3
COL1A1-209ENST00000495677 GABRQQ9UN88 632 aa16.93■□□□□ 0.3
COL1A1-209ENST00000495677 A0A0C4DFX4 3053 aa16.93■□□□□ 0.3
COL1A1-209ENST00000495677 ADCY3O60266 1144 aa16.92■□□□□ 0.3
COL1A1-209ENST00000495677 EVI5O60447 810 aa16.92■□□□□ 0.3
COL1A1-209ENST00000495677 ECM2O94769 699 aaPredicted RBP16.92■□□□□ 0.3
COL1A1-209ENST00000495677 NBPF7P0C2Y1 421 aaPredicted RBP16.92■□□□□ 0.3
COL1A1-209ENST00000495677 FGFR2P21802 821 aa16.92■□□□□ 0.3
COL1A1-209ENST00000495677 MNX1P50219 401 aaPredicted RBP16.92■□□□□ 0.3
COL1A1-209ENST00000495677 METTL24Q5JXM2 366 aa16.92■□□□□ 0.3
COL1A1-209ENST00000495677 CRISPLD2Q9H0B8 497 aa16.92■□□□□ 0.3
COL1A1-209ENST00000495677 DOCK1Q14185 1865 aa16.91■□□□□ 0.3
COL1A1-209ENST00000495677 PAK6Q9NQU5 681 aaPredicted RBP16.91■□□□□ 0.3
COL1A1-209ENST00000495677 A0A0G2JLL6 359 aaPredicted RBP16.9■□□□□ 0.3
COL1A1-209ENST00000495677 PHF20L1A8MW92 1017 aa16.9■□□□□ 0.3
COL1A1-209ENST00000495677 SOX1O00570 391 aaPredicted RBP16.9■□□□□ 0.3
COL1A1-209ENST00000495677 IFIT1P09914 478 aaKnown RBP16.9■□□□□ 0.3
COL1A1-209ENST00000495677 CYP2C8P10632 490 aa16.9■□□□□ 0.3
COL1A1-209ENST00000495677 FLT3LGP49771 235 aa16.9■□□□□ 0.3
COL1A1-209ENST00000495677 MAP3K10Q02779 954 aa16.9■□□□□ 0.3
COL1A1-209ENST00000495677 CDC42EP5Q6NZY7 148 aa16.9■□□□□ 0.3
COL1A1-209ENST00000495677 PRRT2Q7Z6L0 340 aaPredicted RBP16.9■□□□□ 0.3
COL1A1-209ENST00000495677 BICC1Q9H694 974 aaKnown RBP16.9■□□□□ 0.3
COL1A1-209ENST00000495677 ZBTB22O15209 634 aa16.89■□□□□ 0.29
COL1A1-209ENST00000495677 TFRCP02786 760 aaKnown RBP16.89■□□□□ 0.29
COL1A1-209ENST00000495677 CCDC184Q52MB2 194 aa16.89■□□□□ 0.29
COL1A1-209ENST00000495677 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
COL1A1-209ENST00000495677 LRCH3Q96II8 777 aa16.89■□□□□ 0.29
COL1A1-209ENST00000495677 GDF15Q99988 308 aa16.89■□□□□ 0.29
COL1A1-209ENST00000495677 FAM198AQ9UFP1 575 aa16.89■□□□□ 0.29
COL1A1-209ENST00000495677 STAP2Q9UGK3 403 aa16.89■□□□□ 0.29
COL1A1-209ENST00000495677 DAGLAQ9Y4D2 1042 aa16.89■□□□□ 0.29
COL1A1-209ENST00000495677 AFG3L2Q9Y4W6 797 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms