RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 AATFQ9NY61 560 aaKnown RBP eCLIP16.21■□□□□ 0.19
APTX-231ENST00000494973 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.19
APTX-231ENST00000494973 SCNN1DP51172 638 aa16.2■□□□□ 0.18
APTX-231ENST00000494973 CFAP100Q494V2 611 aa16.2■□□□□ 0.18
APTX-231ENST00000494973 AMOTL1Q8IY63 956 aa16.2■□□□□ 0.18
APTX-231ENST00000494973 MIGA1Q8NAN2 632 aa16.2■□□□□ 0.18
APTX-231ENST00000494973 L3MBTL3Q96JM7 780 aaPredicted RBP16.2■□□□□ 0.18
APTX-231ENST00000494973 STRBPQ96SI9 672 aaKnown RBP16.2■□□□□ 0.18
APTX-231ENST00000494973 ATP8A2Q9NTI2 1148 aa16.2■□□□□ 0.18
APTX-231ENST00000494973 GPRC5DQ9NZD1 345 aa16.2■□□□□ 0.18
APTX-231ENST00000494973 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
APTX-231ENST00000494973 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
APTX-231ENST00000494973 IQCA1LA6NCM1 817 aa16.19■□□□□ 0.18
APTX-231ENST00000494973 GLTPD2A6NH11 291 aa16.19■□□□□ 0.18
APTX-231ENST00000494973 PATL2C9JE40 543 aaKnown RBP16.19■□□□□ 0.18
APTX-231ENST00000494973 RNF20Q5VTR2 975 aa16.19■□□□□ 0.18
APTX-231ENST00000494973 ADGRA1Q86SQ6 560 aa16.19■□□□□ 0.18
APTX-231ENST00000494973 ZNF589Q86UQ0 364 aaPredicted RBP16.19■□□□□ 0.18
APTX-231ENST00000494973 MICALL2Q8IY33 904 aa16.19■□□□□ 0.18
APTX-231ENST00000494973 LCORLQ8N3X6 602 aa16.19■□□□□ 0.18
APTX-231ENST00000494973 SEC62Q99442 399 aaKnown RBP16.19■□□□□ 0.18
APTX-231ENST00000494973 ARMT1Q9H993 441 aa16.19■□□□□ 0.18
APTX-231ENST00000494973 MYOZ2Q9NPC6 264 aa16.19■□□□□ 0.18
APTX-231ENST00000494973 CNOT7Q9UIV1 285 aaKnown RBP16.19■□□□□ 0.18
APTX-231ENST00000494973 SPDYE2BA6NHP3 402 aa16.18■□□□□ 0.18
APTX-231ENST00000494973 NPM3O75607 178 aaKnown RBP16.18■□□□□ 0.18
APTX-231ENST00000494973 SPDYE6P0CI01 402 aa16.18■□□□□ 0.18
APTX-231ENST00000494973 USP5P45974 858 aa16.18■□□□□ 0.18
APTX-231ENST00000494973 ALX1Q15699 326 aa16.18■□□□□ 0.18
APTX-231ENST00000494973 TEX11Q8IYF3 940 aa16.18■□□□□ 0.18
APTX-231ENST00000494973 TAOK2Q9UL54 1235 aa16.18■□□□□ 0.18
APTX-231ENST00000494973 SLC4A4Q9Y6R1 1079 aa16.18■□□□□ 0.18
APTX-231ENST00000494973 SCN4AP35499 1836 aa16.17■□□□□ 0.18
APTX-231ENST00000494973 ECM29Q5VYK3 1845 aa16.17■□□□□ 0.18
APTX-231ENST00000494973 APPP05067 770 aa16.17■□□□□ 0.18
APTX-231ENST00000494973 HSPD1P10809 573 aaKnown RBP16.17■□□□□ 0.18
APTX-231ENST00000494973 KIF4BQ2VIQ3 1234 aa16.17■□□□□ 0.18
APTX-231ENST00000494973 FKBP1CQ5VVH2 108 aa16.17■□□□□ 0.18
APTX-231ENST00000494973 APOBEC3HQ6NTF7 200 aaKnown RBP16.17■□□□□ 0.18
APTX-231ENST00000494973 CCDC129Q6ZRS4 1044 aa16.17■□□□□ 0.18
APTX-231ENST00000494973 MAP4K1Q92918 833 aa16.17■□□□□ 0.18
APTX-231ENST00000494973 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
APTX-231ENST00000494973 NAPBQ9H115 298 aa16.17■□□□□ 0.18
APTX-231ENST00000494973 USP40Q9NVE5 1235 aa16.17■□□□□ 0.18
APTX-231ENST00000494973 ARPP21Q9UBL0 812 aaPredicted RBP16.17■□□□□ 0.18
APTX-231ENST00000494973 GOLGB1Q14789 3259 aaKnown RBP16.17■□□□□ 0.18
APTX-231ENST00000494973 SRCAPQ6ZRS2 3230 aa16.16■□□□□ 0.18
APTX-231ENST00000494973 DDNO94850 711 aaPredicted RBP16.16■□□□□ 0.18
APTX-231ENST00000494973 CHGBP05060 677 aa16.16■□□□□ 0.18
APTX-231ENST00000494973 ZKSCAN1P17029 563 aaPredicted RBP16.16■□□□□ 0.18
APTX-231ENST00000494973 TDO2P48775 406 aa16.16■□□□□ 0.18
APTX-231ENST00000494973 NT5C2P49902 561 aa16.16■□□□□ 0.18
APTX-231ENST00000494973 RHBDL3P58872 404 aa16.16■□□□□ 0.18
APTX-231ENST00000494973 TNFAIP1Q13829 316 aa16.16■□□□□ 0.18
APTX-231ENST00000494973 SLFNL1Q499Z3 407 aa16.16■□□□□ 0.18
APTX-231ENST00000494973 IL27Q8NEV9 243 aa16.16■□□□□ 0.18
APTX-231ENST00000494973 ADARB2Q9NS39 739 aaKnown RBP16.16■□□□□ 0.18
APTX-231ENST00000494973 FOCADQ5VW36 1801 aa16.16■□□□□ 0.18
APTX-231ENST00000494973 WDR90Q96KV7 1748 aa16.16■□□□□ 0.18
APTX-231ENST00000494973 TNNI2P48788 182 aa16.15■□□□□ 0.18
APTX-231ENST00000494973 DYNLL1P63167 89 aaKnown RBP16.15■□□□□ 0.18
APTX-231ENST00000494973 IMMTQ16891 758 aaKnown RBP16.15■□□□□ 0.18
APTX-231ENST00000494973 CDC42EP5Q6NZY7 148 aa16.15■□□□□ 0.18
APTX-231ENST00000494973 NAV1Q8NEY1 1877 aa16.15■□□□□ 0.18
APTX-231ENST00000494973 SH3RF3Q8TEJ3 882 aaPredicted RBP16.15■□□□□ 0.18
APTX-231ENST00000494973 IDI2Q9BXS1 227 aa16.15■□□□□ 0.18
APTX-231ENST00000494973 IL25Q9H293 177 aa16.15■□□□□ 0.18
APTX-231ENST00000494973 HACL1Q9UJ83 578 aa16.15■□□□□ 0.18
APTX-231ENST00000494973 COL2A1P02458 1487 aaPredicted RBP16.15■□□□□ 0.18
APTX-231ENST00000494973 ADAMTSL1Q8N6G6 1762 aa16.14■□□□□ 0.17
APTX-231ENST00000494973 ENTPD3O75355 529 aa16.14■□□□□ 0.17
APTX-231ENST00000494973 SLC3A2P08195 630 aaKnown RBP16.14■□□□□ 0.17
APTX-231ENST00000494973 PCP11498 1178 aaKnown RBP16.14■□□□□ 0.17
APTX-231ENST00000494973 ANAPC15P60006 121 aa16.14■□□□□ 0.17
APTX-231ENST00000494973 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
APTX-231ENST00000494973 IFNL3Q8IZI9 196 aa16.14■□□□□ 0.17
APTX-231ENST00000494973 ZBED3Q96IU2 234 aaPredicted RBP16.14■□□□□ 0.17
APTX-231ENST00000494973 USP26Q9BXU7 913 aa16.14■□□□□ 0.17
APTX-231ENST00000494973 RBM8AQ9Y5S9 174 aaKnown RBP16.14■□□□□ 0.17
APTX-231ENST00000494973 LAMA4Q16363 1823 aa16.13■□□□□ 0.17
APTX-231ENST00000494973 GSG1L2A8MUP6 293 aa16.13■□□□□ 0.17
APTX-231ENST00000494973 WNT10BO00744 389 aa16.13■□□□□ 0.17
APTX-231ENST00000494973 HSPA4P34932 840 aa16.13■□□□□ 0.17
APTX-231ENST00000494973 KRT32Q14532 448 aa16.13■□□□□ 0.17
APTX-231ENST00000494973 USP50Q70EL3 339 aaPredicted RBP16.13■□□□□ 0.17
APTX-231ENST00000494973 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
APTX-231ENST00000494973 APOBEC3FQ8IUX4 373 aaKnown RBP16.13■□□□□ 0.17
APTX-231ENST00000494973 TGFBRAP1Q8WUH2 860 aa16.13■□□□□ 0.17
APTX-231ENST00000494973 C22orf23Q9BZE7 217 aa16.13■□□□□ 0.17
APTX-231ENST00000494973 DHX36Q9H2U1 1008 aaKnown RBP16.13■□□□□ 0.17
APTX-231ENST00000494973 ZNF287Q9HBT7 754 aa16.13■□□□□ 0.17
APTX-231ENST00000494973 DCP1AQ9NPI6 582 aaPredicted RBP16.13■□□□□ 0.17
APTX-231ENST00000494973 FLT1P17948 1338 aa16.13■□□□□ 0.17
APTX-231ENST00000494973 CDK5RAP2Q96SN8 1893 aa16.12■□□□□ 0.17
APTX-231ENST00000494973 ZNF213O14771 459 aa16.12■□□□□ 0.17
APTX-231ENST00000494973 HLA-DOAP06340 250 aa16.12■□□□□ 0.17
APTX-231ENST00000494973 RBM25P49756 843 aaKnown RBP16.12■□□□□ 0.17
APTX-231ENST00000494973 PTH1RQ03431 593 aa16.12■□□□□ 0.17
APTX-231ENST00000494973 SBK1Q52WX2 424 aa16.12■□□□□ 0.17
APTX-231ENST00000494973 VPS53Q5VIR6 699 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms