RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 OS9Q13438 667 aaPredicted RBP19.24■□□□□ 0.67
LIMS2-216ENST00000494613 FAM151AQ8WW52 585 aa19.24■□□□□ 0.67
LIMS2-216ENST00000494613 FAM163AQ96GL9 167 aaPredicted RBP19.24■□□□□ 0.67
LIMS2-216ENST00000494613 GPR108Q9NPR9 543 aa19.24■□□□□ 0.67
LIMS2-216ENST00000494613 PDS5AQ29RF7 1337 aaKnown RBP19.24■□□□□ 0.67
LIMS2-216ENST00000494613 TCP10Q12799 353 aa19.23■□□□□ 0.67
LIMS2-216ENST00000494613 DGKZQ13574 1117 aa19.23■□□□□ 0.67
LIMS2-216ENST00000494613 SPATA5Q8NB90 893 aa19.23■□□□□ 0.67
LIMS2-216ENST00000494613 MCOLN1Q9GZU1 580 aa19.23■□□□□ 0.67
LIMS2-216ENST00000494613 ELP3Q9H9T3 547 aa19.23■□□□□ 0.67
LIMS2-216ENST00000494613 RCAN3Q9UKA8 241 aa19.23■□□□□ 0.67
LIMS2-216ENST00000494613 AKAP11Q9UKA4 1901 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 NFIAQ12857 509 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 TNNI3KQ59H18 835 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 CEP85Q6P2H3 762 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 PI16Q6UXB8 463 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 TBC1D9Q6ZT07 1266 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 ERICH6Q7L0X2 663 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 MIGA2Q7L4E1 593 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 IFNL1Q8IU54 200 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.22■□□□□ 0.67
LIMS2-216ENST00000494613 HOOK2Q96ED9 719 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 R3HDMLQ9H3Y0 253 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 FAM198AQ9UFP1 575 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 FPGT-TNNI3KV9GXZ4 949 aa19.22■□□□□ 0.67
LIMS2-216ENST00000494613 UQCRFS1P1P0C7P4 283 aa19.21■□□□□ 0.67
LIMS2-216ENST00000494613 ARID4AP29374 1257 aaPredicted RBP19.21■□□□□ 0.67
LIMS2-216ENST00000494613 MECOMQ03112 1051 aa19.21■□□□□ 0.67
LIMS2-216ENST00000494613 DZIP1Q86YF9 867 aaKnown RBP19.21■□□□□ 0.67
LIMS2-216ENST00000494613 ZFPM1Q8IX07 1006 aa19.21■□□□□ 0.67
LIMS2-216ENST00000494613 SLF2Q8IX21 1173 aa19.21■□□□□ 0.67
LIMS2-216ENST00000494613 OPTNQ96CV9 577 aa19.21■□□□□ 0.67
LIMS2-216ENST00000494613 ARAP2Q8WZ64 1704 aa19.2■□□□□ 0.66
LIMS2-216ENST00000494613 ALDH1A1P00352 501 aa19.2■□□□□ 0.66
LIMS2-216ENST00000494613 MCAMP43121 646 aa19.2■□□□□ 0.66
LIMS2-216ENST00000494613 VGLL4Q14135 290 aa19.2■□□□□ 0.66
LIMS2-216ENST00000494613 CNKSR2Q8WXI2 1034 aa19.2■□□□□ 0.66
LIMS2-216ENST00000494613 ZKSCAN4Q969J2 545 aaPredicted RBP19.2■□□□□ 0.66
LIMS2-216ENST00000494613 DBNDD2Q9BQY9 259 aa19.2■□□□□ 0.66
LIMS2-216ENST00000494613 COG6Q9Y2V7 657 aa19.2■□□□□ 0.66
LIMS2-216ENST00000494613 CSADQ9Y600 493 aa19.2■□□□□ 0.66
LIMS2-216ENST00000494613 TESPA1A2RU30 521 aaPredicted RBP19.19■□□□□ 0.66
LIMS2-216ENST00000494613 GPR25O00155 361 aa19.19■□□□□ 0.66
LIMS2-216ENST00000494613 CCDC158Q5M9N0 1113 aa19.19■□□□□ 0.66
LIMS2-216ENST00000494613 DCAF15Q66K64 600 aa19.19■□□□□ 0.66
LIMS2-216ENST00000494613 ZNF384Q8TF68 577 aa19.19■□□□□ 0.66
LIMS2-216ENST00000494613 ZNF296Q8WUU4 475 aaPredicted RBP19.19■□□□□ 0.66
LIMS2-216ENST00000494613 MS4A4AQ96JQ5 239 aa19.19■□□□□ 0.66
LIMS2-216ENST00000494613 PTPN18Q99952 460 aa19.19■□□□□ 0.66
LIMS2-216ENST00000494613 CFHR5Q9BXR6 569 aa19.19■□□□□ 0.66
LIMS2-216ENST00000494613 GAKO14976 1311 aa19.19■□□□□ 0.66
LIMS2-216ENST00000494613 GPR75-ASB3A0A0A6YYF3 556 aa19.18■□□□□ 0.66
LIMS2-216ENST00000494613 IGF2BP3O00425 579 aaKnown RBP eCLIP19.18■□□□□ 0.66
LIMS2-216ENST00000494613 LDHCP07864 332 aa19.18■□□□□ 0.66
LIMS2-216ENST00000494613 TTC39AQ5SRH9 613 aa19.18■□□□□ 0.66
LIMS2-216ENST00000494613 WRNIP1Q96S55 665 aa19.18■□□□□ 0.66
LIMS2-216ENST00000494613 IDI2Q9BXS1 227 aa19.18■□□□□ 0.66
LIMS2-216ENST00000494613 CCDC8Q9H0W5 538 aaPredicted RBP19.18■□□□□ 0.66
LIMS2-216ENST00000494613 SNRKQ9NRH2 765 aa19.18■□□□□ 0.66
LIMS2-216ENST00000494613 CCDC85CA6NKD9 419 aa19.17■□□□□ 0.66
LIMS2-216ENST00000494613 NOM1Q5C9Z4 860 aaKnown RBP19.17■□□□□ 0.66
LIMS2-216ENST00000494613 OTUD7BQ6GQQ9 843 aa19.17■□□□□ 0.66
LIMS2-216ENST00000494613 NSUN4Q96CB9 384 aaKnown RBP19.17■□□□□ 0.66
LIMS2-216ENST00000494613 EAF2Q96CJ1 260 aaPredicted RBP19.17■□□□□ 0.66
LIMS2-216ENST00000494613 ZNF341Q9BYN7 854 aa19.17■□□□□ 0.66
LIMS2-216ENST00000494613 ZBTB40Q9NUA8 1239 aa19.17■□□□□ 0.66
LIMS2-216ENST00000494613 RAI14Q9P0K7 980 aa19.17■□□□□ 0.66
LIMS2-216ENST00000494613 LRP2BPQ9P2M1 347 aa19.17■□□□□ 0.66
LIMS2-216ENST00000494613 ZNF112Q9UJU3 913 aa19.17■□□□□ 0.66
LIMS2-216ENST00000494613 MYH13Q9UKX3 1938 aa19.16■□□□□ 0.66
LIMS2-216ENST00000494613 ENTPD3O75355 529 aa19.16■□□□□ 0.66
LIMS2-216ENST00000494613 BTDP43251 543 aa19.16■□□□□ 0.66
LIMS2-216ENST00000494613 RGS3P49796 1198 aa19.16■□□□□ 0.66
LIMS2-216ENST00000494613 GSTO1P78417 241 aa19.16■□□□□ 0.66
LIMS2-216ENST00000494613 ERO1BQ86YB8 467 aa19.16■□□□□ 0.66
LIMS2-216ENST00000494613 RPAP2Q8IXW5 612 aaPredicted RBP19.16■□□□□ 0.66
LIMS2-216ENST00000494613 ZNF512BQ96KM6 892 aaPredicted RBP19.16■□□□□ 0.66
LIMS2-216ENST00000494613 DDX19BQ9UMR2 479 aa19.16■□□□□ 0.66
LIMS2-216ENST00000494613 EXOC6BQ9Y2D4 811 aa19.16■□□□□ 0.66
LIMS2-216ENST00000494613 SNCAIPQ9Y6H5 919 aa19.16■□□□□ 0.66
LIMS2-216ENST00000494613 WDHD1O75717 1129 aaPredicted RBP19.15■□□□□ 0.66
LIMS2-216ENST00000494613 INPP5BP32019 993 aa19.15■□□□□ 0.66
LIMS2-216ENST00000494613 GTF2A2P52657 109 aa19.15■□□□□ 0.66
LIMS2-216ENST00000494613 CTU1Q7Z7A3 348 aaKnown RBP19.15■□□□□ 0.66
LIMS2-216ENST00000494613 OTUD5Q96G74 571 aa19.15■□□□□ 0.66
LIMS2-216ENST00000494613 MROH7-TTC4A0A0A0MT08 1334 aa19.15■□□□□ 0.66
LIMS2-216ENST00000494613 SPDYE5A6NIY4 337 aa19.14■□□□□ 0.65
LIMS2-216ENST00000494613 FKTNO75072 461 aa19.14■□□□□ 0.65
LIMS2-216ENST00000494613 CYP2E1P05181 493 aaPredicted RBP19.14■□□□□ 0.65
LIMS2-216ENST00000494613 RHBDL3P58872 404 aa19.14■□□□□ 0.65
LIMS2-216ENST00000494613 SH3BP5LQ7L8J4 393 aa19.14■□□□□ 0.65
LIMS2-216ENST00000494613 SIRT2Q8IXJ6 389 aa19.14■□□□□ 0.65
LIMS2-216ENST00000494613 DDX4Q9NQI0 724 aaKnown RBP19.14■□□□□ 0.65
LIMS2-216ENST00000494613 DBNLQ9UJU6 430 aaKnown RBP19.14■□□□□ 0.65
LIMS2-216ENST00000494613 RPAP1Q9BWH6 1393 aaPredicted RBP19.14■□□□□ 0.65
LIMS2-216ENST00000494613 DDTLA6NHG4 134 aaPredicted RBP19.13■□□□□ 0.65
LIMS2-216ENST00000494613 ZAP70P43403 619 aa19.13■□□□□ 0.65
LIMS2-216ENST00000494613 MAP3K10Q02779 954 aa19.13■□□□□ 0.65
LIMS2-216ENST00000494613 HSP90AB4PQ58FF6 505 aa19.13■□□□□ 0.65
LIMS2-216ENST00000494613 C20orf194Q5TEA3 1177 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms