RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MIGA2Q7L4E1 593 aa15.81■□□□□ 0.12
SKA1-205ENST00000494518 MAST3O60307 1309 aa15.8■□□□□ 0.12
SKA1-205ENST00000494518 SPDYE5A6NIY4 337 aa15.8■□□□□ 0.12
SKA1-205ENST00000494518 TCP10Q12799 353 aa15.8■□□□□ 0.12
SKA1-205ENST00000494518 DIXDC1Q155Q3 683 aa15.8■□□□□ 0.12
SKA1-205ENST00000494518 ATG9AQ7Z3C6 839 aa15.8■□□□□ 0.12
SKA1-205ENST00000494518 LPIN2Q92539 896 aa15.8■□□□□ 0.12
SKA1-205ENST00000494518 ZFYVE28Q9HCC9 887 aa15.8■□□□□ 0.12
SKA1-205ENST00000494518 DOCK2Q92608 1830 aa15.8■□□□□ 0.12
SKA1-205ENST00000494518 KIF16BQ96L93 1317 aa15.79■□□□□ 0.12
SKA1-205ENST00000494518 MYCP01106 439 aaPredicted RBP15.79■□□□□ 0.12
SKA1-205ENST00000494518 UBTFL1P0CB47 393 aaPredicted RBP15.79■□□□□ 0.12
SKA1-205ENST00000494518 PA2G4Q9UQ80 394 aaKnown RBP15.79■□□□□ 0.12
SKA1-205ENST00000494518 IRF6O14896 467 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 PRDX5P30044 214 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 INPP5BP32019 993 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 ATP2B3Q16720 1220 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 ALDH1L2Q3SY69 923 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 HHIPL2Q6UWX4 724 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 FAM83AQ86UY5 434 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 ERO1BQ86YB8 467 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 WDR66Q8TBY9 1149 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 ARHGAP39Q9C0H5 1083 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 NOB1Q9ULX3 412 aaKnown RBP15.78■□□□□ 0.12
SKA1-205ENST00000494518 DAGLAQ9Y4D2 1042 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 LRRFIP2Q9Y608 721 aaKnown RBP15.78■□□□□ 0.12
SKA1-205ENST00000494518 PTCH2Q9Y6C5 1203 aa15.78■□□□□ 0.12
SKA1-205ENST00000494518 BTBD19C9JJ37 291 aa15.77■□□□□ 0.12
SKA1-205ENST00000494518 EN2P19622 333 aaPredicted RBP15.77■□□□□ 0.12
SKA1-205ENST00000494518 NFIAQ12857 509 aa15.77■□□□□ 0.12
SKA1-205ENST00000494518 DCAF15Q66K64 600 aa15.77■□□□□ 0.12
SKA1-205ENST00000494518 INTS3Q68E01 1043 aaKnown RBP15.77■□□□□ 0.12
SKA1-205ENST00000494518 CDC42EP5Q6NZY7 148 aa15.77■□□□□ 0.12
SKA1-205ENST00000494518 SUGT1Q9Y2Z0 365 aa15.77■□□□□ 0.12
SKA1-205ENST00000494518 RPAP1Q9BWH6 1393 aaPredicted RBP15.76■□□□□ 0.11
SKA1-205ENST00000494518 CETPP11597 493 aa15.76■□□□□ 0.11
SKA1-205ENST00000494518 ADORA1P30542 326 aa15.76■□□□□ 0.11
SKA1-205ENST00000494518 PHKA1P46020 1223 aa15.76■□□□□ 0.11
SKA1-205ENST00000494518 PPIL2Q13356 520 aa15.76■□□□□ 0.11
SKA1-205ENST00000494518 SNAPC2Q13487 334 aa15.76■□□□□ 0.11
SKA1-205ENST00000494518 FKBP1CQ5VVH2 108 aa15.76■□□□□ 0.11
SKA1-205ENST00000494518 ARMC5Q96C12 935 aa15.76■□□□□ 0.11
SKA1-205ENST00000494518 MRIQ9BWK5 157 aa15.76■□□□□ 0.11
SKA1-205ENST00000494518 ZNF341Q9BYN7 854 aa15.76■□□□□ 0.11
SKA1-205ENST00000494518 CEP126Q9P2H0 1117 aa15.76■□□□□ 0.11
SKA1-205ENST00000494518 LDHBP07195 334 aaKnown RBP15.75■□□□□ 0.11
SKA1-205ENST00000494518 SLC9C1Q4G0N8 1177 aa15.75■□□□□ 0.11
SKA1-205ENST00000494518 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.75■□□□□ 0.11
SKA1-205ENST00000494518 FAM151AQ8WW52 585 aa15.75■□□□□ 0.11
SKA1-205ENST00000494518 HOOK2Q96ED9 719 aa15.75■□□□□ 0.11
SKA1-205ENST00000494518 MEIS3Q99687 375 aa15.75■□□□□ 0.11
SKA1-205ENST00000494518 USP40Q9NVE5 1235 aa15.75■□□□□ 0.11
SKA1-205ENST00000494518 MGAMO43451 1857 aa15.74■□□□□ 0.11
SKA1-205ENST00000494518 CIAO1O76071 339 aa15.74■□□□□ 0.11
SKA1-205ENST00000494518 ZFPM1Q8IX07 1006 aa15.74■□□□□ 0.11
SKA1-205ENST00000494518 SH3TC2Q8TF17 1288 aa15.74■□□□□ 0.11
SKA1-205ENST00000494518 ZNF333Q96JL9 665 aa15.74■□□□□ 0.11
SKA1-205ENST00000494518 GNL3LQ9NVN8 582 aaKnown RBP15.74■□□□□ 0.11
SKA1-205ENST00000494518 FAM198AQ9UFP1 575 aa15.74■□□□□ 0.11
SKA1-205ENST00000494518 PTPRFP10586 1907 aa15.73■□□□□ 0.11
SKA1-205ENST00000494518 TLR2O60603 784 aa15.73■□□□□ 0.11
SKA1-205ENST00000494518 WDHD1O75717 1129 aaPredicted RBP15.73■□□□□ 0.11
SKA1-205ENST00000494518 TRMT2AQ8IZ69 625 aaKnown RBP15.73■□□□□ 0.11
SKA1-205ENST00000494518 TMEM106CQ9BVX2 250 aa15.73■□□□□ 0.11
SKA1-205ENST00000494518 CPA4Q9UI42 421 aa15.73■□□□□ 0.11
SKA1-205ENST00000494518 SLURP2P0DP57 97 aa15.72■□□□□ 0.11
SKA1-205ENST00000494518 IL15P40933 162 aaPredicted RBP15.72■□□□□ 0.11
SKA1-205ENST00000494518 LACTBP83111 547 aaPredicted RBP15.72■□□□□ 0.11
SKA1-205ENST00000494518 PPATQ06203 517 aa15.72■□□□□ 0.11
SKA1-205ENST00000494518 KIF22Q14807 665 aa15.72■□□□□ 0.11
SKA1-205ENST00000494518 ARHGEF6Q15052 776 aa15.72■□□□□ 0.11
SKA1-205ENST00000494518 SLC4A8Q2Y0W8 1093 aa15.72■□□□□ 0.11
SKA1-205ENST00000494518 API5Q9BZZ5 524 aaKnown RBP15.72■□□□□ 0.11
SKA1-205ENST00000494518 DENND2AQ9ULE3 1009 aa15.72■□□□□ 0.11
SKA1-205ENST00000494518 DOCK1Q14185 1865 aa15.71■□□□□ 0.11
SKA1-205ENST00000494518 CTGFP29279 349 aa15.71■□□□□ 0.11
SKA1-205ENST00000494518 CCDC102BQ68D86 513 aa15.71■□□□□ 0.11
SKA1-205ENST00000494518 PHIPQ8WWQ0 1821 aa15.71■□□□□ 0.1
SKA1-205ENST00000494518 PDHXO00330 501 aa15.7■□□□□ 0.1
SKA1-205ENST00000494518 RGS3P49796 1198 aa15.7■□□□□ 0.1
SKA1-205ENST00000494518 TIMM10P62072 90 aa15.7■□□□□ 0.1
SKA1-205ENST00000494518 RASGRF1Q13972 1273 aa15.7■□□□□ 0.1
SKA1-205ENST00000494518 POLA2Q14181 598 aa15.7■□□□□ 0.1
SKA1-205ENST00000494518 NBPF11Q86T75 865 aa15.7■□□□□ 0.1
SKA1-205ENST00000494518 ABCF2Q9UG63 623 aa15.7■□□□□ 0.1
SKA1-205ENST00000494518 ZNF112Q9UJU3 913 aa15.7■□□□□ 0.1
SKA1-205ENST00000494518 FBXO3Q9UK99 471 aa15.7■□□□□ 0.1
SKA1-205ENST00000494518 TNNQ9UQP3 1299 aa15.7■□□□□ 0.1
SKA1-205ENST00000494518 TRIOBPQ9H2D6 2365 aa15.7■□□□□ 0.1
SKA1-205ENST00000494518 SALL1Q9NSC2 1324 aa15.69■□□□□ 0.1
SKA1-205ENST00000494518 ATAD5Q96QE3 1844 aa15.69■□□□□ 0.1
SKA1-205ENST00000494518 DOCK3Q8IZD9 2030 aa15.69■□□□□ 0.1
SKA1-205ENST00000494518 RARSP54136 660 aaKnown RBP15.69■□□□□ 0.1
SKA1-205ENST00000494518 TFCP2Q12800 502 aa15.69■□□□□ 0.1
SKA1-205ENST00000494518 PICALMQ13492 652 aa15.69■□□□□ 0.1
SKA1-205ENST00000494518 C17orf99Q6UX52 265 aa15.69■□□□□ 0.1
SKA1-205ENST00000494518 ANKRD23Q86SG2 305 aa15.69■□□□□ 0.1
SKA1-205ENST00000494518 DZIP1Q86YF9 867 aaKnown RBP15.69■□□□□ 0.1
SKA1-205ENST00000494518 ZCCHC17Q9NP64 241 aaKnown RBP15.69■□□□□ 0.1
SKA1-205ENST00000494518 COPRSQ9NQ92 184 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms