RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 IL31Q6EBC2 164 aa8.44□□□□□ -1.06
SNX13-210ENST00000494402 PDE12Q6L8Q7 609 aaKnown RBP8.44□□□□□ -1.06
SNX13-210ENST00000494402 DDX46Q7L014 1031 aaKnown RBP8.44□□□□□ -1.06
SNX13-210ENST00000494402 CCDC89Q8N998 374 aa8.44□□□□□ -1.06
SNX13-210ENST00000494402 RUSC1Q9BVN2 902 aa8.44□□□□□ -1.06
SNX13-210ENST00000494402 PRDM11Q9NQV5 511 aa8.44□□□□□ -1.06
SNX13-210ENST00000494402 OBP2AQ9NY56 170 aa8.44□□□□□ -1.06
SNX13-210ENST00000494402 LUZP4Q9P127 313 aa8.44□□□□□ -1.06
SNX13-210ENST00000494402 PUF60Q9UHX1 559 aaKnown RBP8.44□□□□□ -1.06
SNX13-210ENST00000494402 TLR6Q9Y2C9 796 aa8.44□□□□□ -1.06
SNX13-210ENST00000494402 FNDC3AQ9Y2H6 1198 aaKnown RBP8.44□□□□□ -1.06
SNX13-210ENST00000494402 MAP4K5Q9Y4K4 846 aa8.44□□□□□ -1.06
SNX13-210ENST00000494402 DNAJC25-GNG10A0A024R161 153 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 RASSF10A6NK89 507 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 EYA4O95677 639 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 POLR3DP05423 398 aaPredicted RBP8.43□□□□□ -1.06
SNX13-210ENST00000494402 FAM153BP0C7A2 387 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 IMPDH2P12268 514 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 MCM4P33991 863 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 NEK3P51956 506 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 SETDB1Q15047 1291 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 RNF219Q5W0B1 726 aaPredicted RBP8.43□□□□□ -1.06
SNX13-210ENST00000494402 CXorf57Q6NSI4 855 aaKnown RBP8.43□□□□□ -1.06
SNX13-210ENST00000494402 MORC1Q86VD1 984 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 PJA1Q8NG27 643 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 WDR66Q8TBY9 1149 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 ENOX1Q8TC92 643 aaKnown RBP8.43□□□□□ -1.06
SNX13-210ENST00000494402 KIF2CQ99661 725 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 MTRQ99707 1265 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 SARGQ9BW04 601 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 LRRC3Q9BY71 257 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 NGRNQ9NPE2 291 aaKnown RBP8.43□□□□□ -1.06
SNX13-210ENST00000494402 SPEF1Q9Y4P9 236 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 PHLDB1Q86UU1 1377 aa8.43□□□□□ -1.06
SNX13-210ENST00000494402 PRPF3O43395 683 aaKnown RBP8.42□□□□□ -1.06
SNX13-210ENST00000494402 RAPGEF3O95398 923 aa8.42□□□□□ -1.06
SNX13-210ENST00000494402 ZNF165P49910 485 aa8.42□□□□□ -1.06
SNX13-210ENST00000494402 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
SNX13-210ENST00000494402 HERPUD2Q9BSE4 406 aa8.42□□□□□ -1.06
SNX13-210ENST00000494402 YIPF4Q9BSR8 244 aa8.42□□□□□ -1.06
SNX13-210ENST00000494402 TARS2Q9BW92 718 aaKnown RBP8.42□□□□□ -1.06
SNX13-210ENST00000494402 SPATA9Q9BWV2 254 aa8.42□□□□□ -1.06
SNX13-210ENST00000494402 PHACTR1Q9C0D0 580 aa8.42□□□□□ -1.06
SNX13-210ENST00000494402 STRN4Q9NRL3 753 aa8.42□□□□□ -1.06
SNX13-210ENST00000494402 USP3Q9Y6I4 520 aa8.42□□□□□ -1.06
SNX13-210ENST00000494402 VSTM5A8MXK1 200 aa8.41□□□□□ -1.06
SNX13-210ENST00000494402 MICAL2O94851 1124 aa8.41□□□□□ -1.06
SNX13-210ENST00000494402 ZRANB2O95218 330 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNX13-210ENST00000494402 PTMAP06454 111 aaKnown RBP8.41□□□□□ -1.06
SNX13-210ENST00000494402 VDRP11473 427 aa8.41□□□□□ -1.06
SNX13-210ENST00000494402 CBX2Q14781 532 aaPredicted RBP8.41□□□□□ -1.06
SNX13-210ENST00000494402 CTC1Q2NKJ3 1217 aa8.41□□□□□ -1.06
SNX13-210ENST00000494402 ZNF354CQ86Y25 554 aa8.41□□□□□ -1.06
SNX13-210ENST00000494402 FAM178BQ8IXR5 827 aa8.41□□□□□ -1.06
SNX13-210ENST00000494402 SNRNP27Q8WVK2 155 aaKnown RBP8.41□□□□□ -1.06
SNX13-210ENST00000494402 JPH3Q8WXH2 748 aaPredicted RBP8.41□□□□□ -1.06
SNX13-210ENST00000494402 STRBPQ96SI9 672 aaKnown RBP8.41□□□□□ -1.06
SNX13-210ENST00000494402 ELAC2Q9BQ52 826 aaKnown RBP8.41□□□□□ -1.06
SNX13-210ENST00000494402 SELENOOQ9BVL4 669 aa8.41□□□□□ -1.06
SNX13-210ENST00000494402 FBRSQ9HAH7 460 aa8.41□□□□□ -1.06
SNX13-210ENST00000494402 IL21Q9HBE4 155 aa8.41□□□□□ -1.06
SNX13-210ENST00000494402 FBXO2Q9UK22 296 aaPredicted RBP8.41□□□□□ -1.06
SNX13-210ENST00000494402 ZNRF3Q9ULT6 936 aa8.41□□□□□ -1.06
SNX13-210ENST00000494402 TMEM238LA0A1B0GVL6 79 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 ANO9A1A5B4 782 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 PRRT4C9JH25 899 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 RNASEH2AO75792 299 aaKnown RBP8.4□□□□□ -1.06
SNX13-210ENST00000494402 ADH1BP00325 375 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 ZSCAN20P17040 1043 aaPredicted RBP8.4□□□□□ -1.06
SNX13-210ENST00000494402 FCGRTP55899 365 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 TLR1Q15399 786 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 SLC4A8Q2Y0W8 1093 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 FNDC3BQ53EP0 1204 aaKnown RBP8.4□□□□□ -1.06
SNX13-210ENST00000494402 TJAP1Q5JTD0 557 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 C6orf15Q6UXA7 325 aaPredicted RBP8.4□□□□□ -1.06
SNX13-210ENST00000494402 EEPD1Q7L9B9 569 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 PODNQ7Z5L7 613 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 LSRQ86X29 649 aaPredicted RBP8.4□□□□□ -1.06
SNX13-210ENST00000494402 ZBTB38Q8NAP3 1195 aaPredicted RBP8.4□□□□□ -1.06
SNX13-210ENST00000494402 RBBP8NLQ8NC74 664 aaPredicted RBP8.4□□□□□ -1.06
SNX13-210ENST00000494402 GLIS3Q8NEA6 775 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 L3MBTL2Q969R5 705 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 SCLT1Q96NL6 688 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 EHD4Q9H223 541 aa8.4□□□□□ -1.06
SNX13-210ENST00000494402 B2RBV5 119 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 PLD2O14939 933 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 ABLIM3O94929 683 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 PHKG2P15735 406 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 HALP42357 657 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 GEMIN4P57678 1058 aaKnown RBP8.39□□□□□ -1.07
SNX13-210ENST00000494402 CWF19L2Q2TBE0 894 aaKnown RBP8.39□□□□□ -1.07
SNX13-210ENST00000494402 KIAA0319Q5VV43 1072 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 CNNM4Q6P4Q7 775 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 STRA8Q7Z7C7 330 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 LRRTM3Q86VH5 581 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 LRRC47Q8N1G4 583 aaKnown RBP8.39□□□□□ -1.07
SNX13-210ENST00000494402 PPM1KQ8N3J5 372 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 C19orf47Q8N9M1 422 aaKnown RBP8.39□□□□□ -1.07
SNX13-210ENST00000494402 ZDHHC1Q8WTX9 485 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 OXCT2Q9BYC2 517 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms