RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 DBNLQ9UJU6 430 aaKnown RBP6.6□□□□□ -1.35
SRPRB-205ENST00000494297 SERPINA10Q9UK55 444 aa6.6□□□□□ -1.35
SRPRB-205ENST00000494297 SCN9AQ15858 1988 aa6.6□□□□□ -1.35
SRPRB-205ENST00000494297 ADAMTSL1Q8N6G6 1762 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 MAST3O60307 1309 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 PASKQ96RG2 1323 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 PITPNM2Q9BZ72 1349 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 IFIT2P09913 472 aaKnown RBP6.59□□□□□ -1.35
SRPRB-205ENST00000494297 MCAMP43121 646 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 CRKP46108 304 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 SCARF1Q14162 830 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 DLGAP5Q15398 846 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 GRIK5Q16478 980 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 TTC39AQ5SRH9 613 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 MAP1SQ66K74 1059 aaPredicted RBP6.59□□□□□ -1.35
SRPRB-205ENST00000494297 SPTY2D1Q68D10 685 aaPredicted RBP6.59□□□□□ -1.35
SRPRB-205ENST00000494297 HHIPL2Q6UWX4 724 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 AACSQ86V21 672 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 SPATA5Q8NB90 893 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.59□□□□□ -1.35
SRPRB-205ENST00000494297 DCPSQ96C86 337 aaKnown RBP6.59□□□□□ -1.35
SRPRB-205ENST00000494297 GCC1Q96CN9 775 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 PRMT6Q96LA8 375 aaPredicted RBP6.59□□□□□ -1.35
SRPRB-205ENST00000494297 RWDD1Q9H446 243 aaPredicted RBP6.59□□□□□ -1.35
SRPRB-205ENST00000494297 IL1RAPL2Q9NP60 686 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 TTF2Q9UNY4 1162 aaKnown RBP6.59□□□□□ -1.35
SRPRB-205ENST00000494297 JAG2Q9Y219 1238 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 PSME4Q14997 1843 aa6.59□□□□□ -1.35
SRPRB-205ENST00000494297 ZNF646O15015 1829 aaPredicted RBP6.58□□□□□ -1.36
SRPRB-205ENST00000494297 F8W031 263 aaPredicted RBP6.58□□□□□ -1.36
SRPRB-205ENST00000494297 APBB1O00213 710 aa6.58□□□□□ -1.36
SRPRB-205ENST00000494297 IGHDP01880 384 aa6.58□□□□□ -1.36
SRPRB-205ENST00000494297 LDHBP07195 334 aaKnown RBP6.58□□□□□ -1.36
SRPRB-205ENST00000494297 HSPA6P17066 643 aa6.58□□□□□ -1.36
SRPRB-205ENST00000494297 PRDX5P30044 214 aa6.58□□□□□ -1.36
SRPRB-205ENST00000494297 APLP1P51693 650 aa6.58□□□□□ -1.36
SRPRB-205ENST00000494297 NBPF9Q3BBW0 867 aa6.58□□□□□ -1.36
SRPRB-205ENST00000494297 CFAP100Q494V2 611 aa6.58□□□□□ -1.36
SRPRB-205ENST00000494297 ANGEL2Q5VTE6 544 aaKnown RBP6.58□□□□□ -1.36
SRPRB-205ENST00000494297 SMC5Q8IY18 1101 aa6.58□□□□□ -1.36
SRPRB-205ENST00000494297 ZDHHC15Q96MV8 337 aa6.58□□□□□ -1.36
SRPRB-205ENST00000494297 TLR7Q9NYK1 1049 aaKnown RBP6.58□□□□□ -1.36
SRPRB-205ENST00000494297 COL1A1P02452 1464 aaPredicted RBP6.58□□□□□ -1.36
SRPRB-205ENST00000494297 ARAP2Q8WZ64 1704 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 MYO1BO43795 1136 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 SMARCA5O60264 1052 aaPredicted RBP6.57□□□□□ -1.36
SRPRB-205ENST00000494297 CYP2E1P05181 493 aaPredicted RBP6.57□□□□□ -1.36
SRPRB-205ENST00000494297 ATP5JP18859 108 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 ZAP70P43403 619 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 ARSIQ5FYB1 569 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 CST9Q5W186 159 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 APOBEC3HQ6NTF7 200 aaKnown RBP6.57□□□□□ -1.36
SRPRB-205ENST00000494297 TMED8Q6PL24 325 aaPredicted RBP6.57□□□□□ -1.36
SRPRB-205ENST00000494297 PI16Q6UXB8 463 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 ERICH6Q7L0X2 663 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 KRT26Q7Z3Y9 468 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 USP48Q86UV5 1035 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 SULF1Q8IWU6 871 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 SLF2Q8IX21 1173 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 TEKT1Q969V4 418 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 GGA3Q9NZ52 723 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 ABCF2Q9UG63 623 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 PCDHAC2Q9Y5I4 1007 aa6.57□□□□□ -1.36
SRPRB-205ENST00000494297 GAKO14976 1311 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 ASTN2O75129 1339 aaPredicted RBP6.56□□□□□ -1.36
SRPRB-205ENST00000494297 TMEM88BA6NKF7 163 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 LDHCP07864 332 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 RBM5P52756 815 aaKnown RBP eCLIP6.56□□□□□ -1.36
SRPRB-205ENST00000494297 IRX6P78412 446 aaPredicted RBP6.56□□□□□ -1.36
SRPRB-205ENST00000494297 GSTO1P78417 241 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 MECOMQ03112 1051 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 TTF1Q15361 905 aaPredicted RBP6.56□□□□□ -1.36
SRPRB-205ENST00000494297 ANKRD45Q5TZF3 282 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 TBC1D9Q6ZT07 1266 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 APOBEC3FQ8IUX4 373 aaKnown RBP6.56□□□□□ -1.36
SRPRB-205ENST00000494297 ZNF384Q8TF68 577 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 NSUN4Q96CB9 384 aaKnown RBP6.56□□□□□ -1.36
SRPRB-205ENST00000494297 GLIS2Q9BZE0 524 aaPredicted RBP6.56□□□□□ -1.36
SRPRB-205ENST00000494297 TDRD3Q9H7E2 651 aaKnown RBP6.56□□□□□ -1.36
SRPRB-205ENST00000494297 SNRKQ9NRH2 765 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 ECHDC1Q9NTX5 307 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 LRP2BPQ9P2M1 347 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 ZNF70Q9UC06 446 aaPredicted RBP6.56□□□□□ -1.36
SRPRB-205ENST00000494297 PPP2R3BQ9Y5P8 575 aa6.56□□□□□ -1.36
SRPRB-205ENST00000494297 TTC41PQ6P2S7 1318 aa6.55□□□□□ -1.36
SRPRB-205ENST00000494297 SALL3Q9BXA9 1300 aa6.55□□□□□ -1.36
SRPRB-205ENST00000494297 GPR75-ASB3A0A0A6YYF3 556 aa6.55□□□□□ -1.36
SRPRB-205ENST00000494297 ADM5C9JUS6 153 aa6.55□□□□□ -1.36
SRPRB-205ENST00000494297 TRAF5O00463 557 aa6.55□□□□□ -1.36
SRPRB-205ENST00000494297 MAP4K4O95819 1239 aaPredicted RBP6.55□□□□□ -1.36
SRPRB-205ENST00000494297 CENPBP07199 599 aaPredicted RBP6.55□□□□□ -1.36
SRPRB-205ENST00000494297 NUCB1Q02818 461 aa6.55□□□□□ -1.36
SRPRB-205ENST00000494297 FMR1Q06787 632 aaKnown RBP eCLIP6.55□□□□□ -1.36
SRPRB-205ENST00000494297 FKBP1CQ5VVH2 108 aa6.55□□□□□ -1.36
SRPRB-205ENST00000494297 FAM83AQ86UY5 434 aa6.55□□□□□ -1.36
SRPRB-205ENST00000494297 DZIP1Q86YF9 867 aaKnown RBP6.55□□□□□ -1.36
SRPRB-205ENST00000494297 KHSRPQ92945 711 aaKnown RBP eCLIP6.55□□□□□ -1.364e-7■■■■□ 21
SRPRB-205ENST00000494297 HAUS7Q99871 368 aa6.55□□□□□ -1.36
SRPRB-205ENST00000494297 DEFB129Q9H1M3 183 aa6.55□□□□□ -1.36
SRPRB-205ENST00000494297 BOLA2Q9H3K6 86 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms