RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 ERBB3P21860 1342 aa13.25□□□□□ -0.29
COL25A1-204ENST00000494183 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 PRAMEF22A3QJZ6 481 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 GOLGA6L9A6NEM1 432 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 ALDH1B1P30837 517 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 KCNQ4P56696 695 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 ARID5AQ03989 594 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 PIK3AP1Q6ZUJ8 805 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL25A1-204ENST00000494183 hCG_1642624A0A1W2PR95 340 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 BCAMP50895 628 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 TFAP4Q01664 338 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 TBC1D22AQ8WUA7 517 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 TTC12Q9H892 705 aaPredicted RBP13.24□□□□□ -0.29
COL25A1-204ENST00000494183 QTRT2Q9H974 415 aaKnown RBP13.24□□□□□ -0.29
COL25A1-204ENST00000494183 NLRP1Q9C000 1473 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 FAM13AO94988 1023 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 RNF123Q5XPI4 1314 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 KDRP35968 1356 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 HSPA4P34932 840 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 PRKG1Q13976 671 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 SPECC1Q5M775 1068 aa13.24□□□□□ -0.29
COL25A1-204ENST00000494183 CCDC66A2RUB6 948 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 MAP9Q49MG5 647 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 GIGYF2Q6Y7W6 1299 aaKnown RBP13.23□□□□□ -0.29
COL25A1-204ENST00000494183 FERMT2Q96AC1 680 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 LLPHQ9BRT6 129 aaKnown RBP13.23□□□□□ -0.29
COL25A1-204ENST00000494183 ZNF408Q9H9D4 720 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 IBTKQ9P2D0 1353 aaPredicted RBP13.23□□□□□ -0.29
COL25A1-204ENST00000494183 USP6P35125 1406 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 PPIP5K2O43314 1243 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 CYLC1P35663 651 aaPredicted RBP13.23□□□□□ -0.29
COL25A1-204ENST00000494183 CRKLP46109 303 aaKnown RBP13.23□□□□□ -0.29
COL25A1-204ENST00000494183 GREM2Q9H772 168 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 ARHGEF10LQ9HCE6 1279 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 TTF2Q9UNY4 1162 aaKnown RBP13.23□□□□□ -0.29
COL25A1-204ENST00000494183 MAP3K15Q6ZN16 1313 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 A0A0D9SFI3 127 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 E7EWF7 191 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 CCDC172P0C7W6 258 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 GSPT1P15170 499 aaKnown RBP13.23□□□□□ -0.29
COL25A1-204ENST00000494183 GBP2P32456 591 aaPredicted RBP13.23□□□□□ -0.29
COL25A1-204ENST00000494183 ANO1Q5XXA6 986 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 ATL3Q6DD88 541 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 CPXCR1Q8N123 301 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 WDR17Q8IZU2 1322 aa13.23□□□□□ -0.29
COL25A1-204ENST00000494183 ZNF335Q9H4Z2 1342 aaPredicted RBP13.23□□□□□ -0.29
COL25A1-204ENST00000494183 FAM47AQ5JRC9 791 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 AKNAD1Q5T1N1 836 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 GOPCQ9HD26 462 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 PICK1Q9NRD5 415 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 JAK2O60674 1132 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 CERS3Q8IU89 383 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 TBC1D5Q92609 795 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 KIAA0754O94854 1291 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 FAM160A1Q05DH4 1040 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 DLGAP5Q15398 846 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 PUS3Q9BZE2 481 aaKnown RBP13.22□□□□□ -0.29
COL25A1-204ENST00000494183 IFFO1Q0D2I5 559 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 HOOK3Q86VS8 718 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 DRC1Q96MC2 740 aa13.22□□□□□ -0.29
COL25A1-204ENST00000494183 KDM6BO15054 1643 aa13.21□□□□□ -0.29
COL25A1-204ENST00000494183 PDE6AP16499 860 aa13.21□□□□□ -0.29
COL25A1-204ENST00000494183 ZRSR2Q15696 482 aaKnown RBP13.21□□□□□ -0.29
COL25A1-204ENST00000494183 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.29
COL25A1-204ENST00000494183 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
COL25A1-204ENST00000494183 TRPC5Q9UL62 973 aaPredicted RBP13.21□□□□□ -0.29
COL25A1-204ENST00000494183 TXKP42681 527 aa13.21□□□□□ -0.29
COL25A1-204ENST00000494183 FAM212AQ96EL1 285 aa13.21□□□□□ -0.29
COL25A1-204ENST00000494183 NAA15Q9BXJ9 866 aaKnown RBP13.21□□□□□ -0.29
COL25A1-204ENST00000494183 COPRSQ9NQ92 184 aa13.21□□□□□ -0.29
COL25A1-204ENST00000494183 IFNKQ9P0W0 207 aa13.21□□□□□ -0.29
COL25A1-204ENST00000494183 DNAI1Q9UI46 699 aa13.21□□□□□ -0.29
COL25A1-204ENST00000494183 TTC37Q6PGP7 1564 aa13.21□□□□□ -0.29
COL25A1-204ENST00000494183 PDE8BO95263 885 aa13.21□□□□□ -0.3
COL25A1-204ENST00000494183 PTH1RQ03431 593 aa13.21□□□□□ -0.3
COL25A1-204ENST00000494183 KRT40Q6A162 431 aa13.21□□□□□ -0.3
COL25A1-204ENST00000494183 SDR42E1Q8WUS8 393 aa13.21□□□□□ -0.3
COL25A1-204ENST00000494183 KIF24Q5T7B8 1368 aa13.21□□□□□ -0.3
COL25A1-204ENST00000494183 IL6STP40189 918 aaPredicted RBP13.2□□□□□ -0.3
COL25A1-204ENST00000494183 CEP135Q66GS9 1140 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 IMPG2Q9BZV3 1241 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 USP40Q9NVE5 1235 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 PDE6BP35913 854 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 CHRNDQ07001 517 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 KIAA0825Q8IV33 1275 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 NIM1KQ8IY84 436 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 SUPT20HQ8NEM7 779 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 KCNH3Q9ULD8 1083 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 KCNJ14Q9UNX9 436 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 CHMP2AO43633 222 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 FAM196AQ6ZSG2 479 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 DYDC1Q8WWB3 177 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 SYNCQ9H7C4 482 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 BICDL2A1A5D9 508 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 TRIM37O94972 964 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 SV2BQ7L1I2 683 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 CCDC42Q96M95 316 aa13.2□□□□□ -0.3
COL25A1-204ENST00000494183 TM6SF1Q9BZW5 370 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms