RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 ARAFP10398 606 aa6.19□□□□□ -1.42
GTF3A-208ENST00000493903 MCM4P33991 863 aa6.19□□□□□ -1.42
GTF3A-208ENST00000493903 GYS2P54840 703 aa6.19□□□□□ -1.42
GTF3A-208ENST00000493903 SPEM2Q0P670 501 aa6.19□□□□□ -1.42
GTF3A-208ENST00000493903 LRRC14Q15048 493 aa6.19□□□□□ -1.42
GTF3A-208ENST00000493903 SPRED3Q2MJR0 410 aa6.19□□□□□ -1.42
GTF3A-208ENST00000493903 C2orf27AQ580R0 203 aa6.19□□□□□ -1.42
GTF3A-208ENST00000493903 COL13A1Q5TAT6 717 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-208ENST00000493903 ZNF468Q5VIY5 522 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-208ENST00000493903 BNC2Q6ZN30 1099 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-208ENST00000493903 GOLGA6L1Q8N7Z2 621 aa6.19□□□□□ -1.42
GTF3A-208ENST00000493903 C19orf47Q8N9M1 422 aaKnown RBP6.19□□□□□ -1.42
GTF3A-208ENST00000493903 THAP3Q8WTV1 239 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-208ENST00000493903 ZNF669Q96BR6 464 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-208ENST00000493903 IRF2BPLQ9H1B7 796 aa6.19□□□□□ -1.42
GTF3A-208ENST00000493903 KANSL2Q9H9L4 492 aa6.19□□□□□ -1.42
GTF3A-208ENST00000493903 DDX56Q9NY93 547 aaKnown RBP6.19□□□□□ -1.42
GTF3A-208ENST00000493903 GPN3Q9UHW5 284 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-208ENST00000493903 KLF15Q9UIH9 416 aa6.19□□□□□ -1.42
GTF3A-208ENST00000493903 GDF2Q9UK05 429 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-208ENST00000493903 ARID4BQ4LE39 1312 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-208ENST00000493903 SHISA8B8ZZ34 492 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 PDE2AO00408 941 aaPredicted RBP6.18□□□□□ -1.42
GTF3A-208ENST00000493903 TLR3O15455 904 aaKnown RBP6.18□□□□□ -1.42
GTF3A-208ENST00000493903 OIP5O43482 229 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 PAGE1O75459 146 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 NFKB1P19838 968 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 ADH6P28332 368 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 NRLP54845 237 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 AMPD3Q01432 767 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 FAAP100Q0VG06 881 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 PLEKHG6Q3KR16 790 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 SLCO4C1Q6ZQN7 724 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 REC114Q7Z4M0 266 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 SYT9Q86SS6 491 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 GALNT6Q8NCL4 622 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 FBXO27Q8NI29 283 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 EHMT1Q9H9B1 1298 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 ADAMTS8Q9UP79 889 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 PPME1Q9Y570 386 aa6.18□□□□□ -1.42
GTF3A-208ENST00000493903 TRIM37O94972 964 aa6.17□□□□□ -1.42
GTF3A-208ENST00000493903 PARNO95453 639 aaKnown RBP6.17□□□□□ -1.42
GTF3A-208ENST00000493903 BPNT1O95861 308 aa6.17□□□□□ -1.42
GTF3A-208ENST00000493903 VIL1P09327 827 aaKnown RBP6.17□□□□□ -1.42
GTF3A-208ENST00000493903 ACPPP15309 386 aa6.17□□□□□ -1.42
GTF3A-208ENST00000493903 NME2P22392 152 aa6.17□□□□□ -1.42
GTF3A-208ENST00000493903 SQSTM1Q13501 440 aa6.17□□□□□ -1.42
GTF3A-208ENST00000493903 FBXW10Q5XX13 1052 aa6.17□□□□□ -1.42
GTF3A-208ENST00000493903 DHX32Q7L7V1 743 aaKnown RBP6.17□□□□□ -1.42
GTF3A-208ENST00000493903 FCHSD1Q86WN1 690 aa6.17□□□□□ -1.42
GTF3A-208ENST00000493903 ST13P5Q8NFI4 369 aaPredicted RBP6.17□□□□□ -1.42
GTF3A-208ENST00000493903 EDARADDQ8WWZ3 215 aa6.17□□□□□ -1.42
GTF3A-208ENST00000493903 AVENQ9NQS1 362 aaPredicted RBP6.17□□□□□ -1.42
GTF3A-208ENST00000493903 ST7Q9NRC1 585 aa6.17□□□□□ -1.42
GTF3A-208ENST00000493903 PCDHB5Q9Y5E4 795 aa6.17□□□□□ -1.42
GTF3A-208ENST00000493903 METTL12A8MUP2 240 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 ATE1O95260 518 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 EPXP11678 715 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 BMP6P22004 513 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 MASP1P48740 699 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 TCEA2Q15560 299 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 PCSK7Q16549 785 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 MTERF2Q49AM1 385 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 HSP90AB2PQ58FF8 381 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 LSRQ86X29 649 aaPredicted RBP6.16□□□□□ -1.42
GTF3A-208ENST00000493903 NEDD1Q8NHV4 660 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 JARID2Q92833 1246 aaPredicted RBP6.16□□□□□ -1.42
GTF3A-208ENST00000493903 PLD4Q96BZ4 506 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 EMILIN2Q9BXX0 1053 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 PBX4Q9BYU1 374 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 CLEC4MQ9H2X3 399 aaPredicted RBP6.16□□□□□ -1.42
GTF3A-208ENST00000493903 BRMS1Q9HCU9 246 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 ENAMQ9NRM1 1142 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 LRRC4BQ9NT99 713 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 PLAAQ9Y263 795 aa6.16□□□□□ -1.42
GTF3A-208ENST00000493903 GJB6O95452 261 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 S100BP04271 92 aaPredicted RBP6.15□□□□□ -1.42
GTF3A-208ENST00000493903 GPLD1P80108 840 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 CLCQ05315 142 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 NEUROD1Q13562 356 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 LARP1BQ659C4 914 aaKnown RBP6.15□□□□□ -1.42
GTF3A-208ENST00000493903 GK5Q6ZS86 529 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 KRT26Q7Z3Y9 468 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 ASAP3Q8TDY4 903 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 BSNDQ8WZ55 320 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 BHMTQ93088 406 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 TNKS2Q9H2K2 1166 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 CHPF2Q9P2E5 772 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 LEMD3Q9Y2U8 911 aa6.15□□□□□ -1.42
GTF3A-208ENST00000493903 LOC102724428A0A0B4J2F2 783 aa6.14□□□□□ -1.43
GTF3A-208ENST00000493903 SIN3BO75182 1162 aa6.14□□□□□ -1.43
GTF3A-208ENST00000493903 TRPA1O75762 1119 aa6.14□□□□□ -1.43
GTF3A-208ENST00000493903 B3GALT4O96024 378 aa6.14□□□□□ -1.43
GTF3A-208ENST00000493903 AMPD1P23109 780 aa6.14□□□□□ -1.43
GTF3A-208ENST00000493903 ARNTP27540 789 aa6.14□□□□□ -1.43
GTF3A-208ENST00000493903 SIK1P57059 783 aa6.14□□□□□ -1.43
GTF3A-208ENST00000493903 RPL6Q02878 288 aaKnown RBP6.14□□□□□ -1.43
GTF3A-208ENST00000493903 LRRFIP1Q32MZ4 808 aaKnown RBP6.14□□□□□ -1.43
GTF3A-208ENST00000493903 LLGL2Q6P1M3 1020 aa6.14□□□□□ -1.43
GTF3A-208ENST00000493903 STAG1Q8WVM7 1258 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms