RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 PRPF38BQ5VTL8 546 aaKnown RBP9.64□□□□□ -0.87
RBM39-238ENST00000493853 KSR2Q6VAB6 950 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 ANKRD18AQ8IVF6 992 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 TSPYL6Q8N831 410 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 PI4KAP1Q8N8J0 262 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 DPF2Q92785 391 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 KDM4CQ9H3R0 1056 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 SEC31BQ9NQW1 1179 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 POLLQ9UGP5 575 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 GGA1Q9UJY5 639 aa9.64□□□□□ -0.87
RBM39-238ENST00000493853 DICER1Q9UPY3 1922 aaKnown RBP9.64□□□□□ -0.87
RBM39-238ENST00000493853 WDR33Q9C0J8 1336 aaKnown RBP9.63□□□□□ -0.87
RBM39-238ENST00000493853 TTC24A2A3L6 582 aaPredicted RBP9.63□□□□□ -0.87
RBM39-238ENST00000493853 YDJCA8MPS7 323 aa9.63□□□□□ -0.87
RBM39-238ENST00000493853 WNT7AO00755 349 aa9.63□□□□□ -0.87
RBM39-238ENST00000493853 FOXN1O15353 648 aa9.63□□□□□ -0.87
RBM39-238ENST00000493853 ECE2O60344 883 aa9.63□□□□□ -0.87
RBM39-238ENST00000493853 UFL1O94874 794 aa9.63□□□□□ -0.87
RBM39-238ENST00000493853 CELF2O95319 508 aaKnown RBP9.63□□□□□ -0.87
RBM39-238ENST00000493853 RPS12P25398 132 aaKnown RBP9.63□□□□□ -0.87
RBM39-238ENST00000493853 FMR1Q06787 632 aaKnown RBP eCLIP9.63□□□□□ -0.87
RBM39-238ENST00000493853 DESI1Q6ICB0 168 aa9.63□□□□□ -0.87
RBM39-238ENST00000493853 PTCRAQ6ISU1 281 aaPredicted RBP9.63□□□□□ -0.87
RBM39-238ENST00000493853 CDC37L1Q7L3B6 337 aa9.63□□□□□ -0.87
RBM39-238ENST00000493853 TBC1D16Q8TBP0 767 aa9.63□□□□□ -0.87
RBM39-238ENST00000493853 CDC5LQ99459 802 aaKnown RBP9.63□□□□□ -0.87
RBM39-238ENST00000493853 ZNF408Q9H9D4 720 aa9.63□□□□□ -0.87
RBM39-238ENST00000493853 SCN4AP35499 1836 aa9.63□□□□□ -0.87
RBM39-238ENST00000493853 IL16Q14005 1332 aa9.62□□□□□ -0.87
RBM39-238ENST00000493853 COL4A5P29400 1685 aa9.62□□□□□ -0.87
RBM39-238ENST00000493853 CFAP99D6REC4 459 aa9.62□□□□□ -0.87
RBM39-238ENST00000493853 TSC1Q92574 1164 aa9.62□□□□□ -0.87
RBM39-238ENST00000493853 DCPSQ96C86 337 aaKnown RBP9.62□□□□□ -0.87
RBM39-238ENST00000493853 CAPNS2Q96L46 248 aa9.62□□□□□ -0.87
RBM39-238ENST00000493853 GPR101Q96P66 508 aaPredicted RBP9.62□□□□□ -0.87
RBM39-238ENST00000493853 GLIS2Q9BZE0 524 aaPredicted RBP9.62□□□□□ -0.87
RBM39-238ENST00000493853 POLR3EQ9NVU0 708 aa9.62□□□□□ -0.87
RBM39-238ENST00000493853 PODXL2Q9NZ53 605 aa9.62□□□□□ -0.87
RBM39-238ENST00000493853 CLK2P49760 499 aaKnown RBP9.61□□□□□ -0.87
RBM39-238ENST00000493853 HIRAP54198 1017 aaPredicted RBP9.61□□□□□ -0.87
RBM39-238ENST00000493853 CTSWP56202 376 aa9.61□□□□□ -0.87
RBM39-238ENST00000493853 FKBP5Q13451 457 aaPredicted RBP9.61□□□□□ -0.87
RBM39-238ENST00000493853 CWF19L2Q2TBE0 894 aaKnown RBP9.61□□□□□ -0.87
RBM39-238ENST00000493853 TBC1D10BQ4KMP7 808 aaPredicted RBP9.61□□□□□ -0.87
RBM39-238ENST00000493853 CST9Q5W186 159 aa9.61□□□□□ -0.87
RBM39-238ENST00000493853 USP48Q86UV5 1035 aa9.61□□□□□ -0.87
RBM39-238ENST00000493853 TRPM4Q8TD43 1214 aa9.61□□□□□ -0.87
RBM39-238ENST00000493853 MYH16Q9H6N6 1097 aa9.61□□□□□ -0.87
RBM39-238ENST00000493853 PRDM10Q9NQV6 1147 aa9.61□□□□□ -0.87
RBM39-238ENST00000493853 KCNQ5Q9NR82 932 aa9.61□□□□□ -0.87
RBM39-238ENST00000493853 EVA1BQ9NVM1 165 aa9.61□□□□□ -0.87
RBM39-238ENST00000493853 PGAP2Q9UHJ9 254 aa9.61□□□□□ -0.87
RBM39-238ENST00000493853 TLL2Q9Y6L7 1015 aa9.61□□□□□ -0.87
RBM39-238ENST00000493853 XDHP47989 1333 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 IGKV5-2P06315 115 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 ATP2B4P23634 1241 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 CTHP32929 405 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 IGHMBP2P38935 993 aaKnown RBP9.6□□□□□ -0.87
RBM39-238ENST00000493853 LBX1P52954 281 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 WNT7BP56706 349 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 KCNH2Q12809 1159 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 FLIIQ13045 1269 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 CYP4F22Q6NT55 531 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 UBE3BQ7Z3V4 1068 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 KRT26Q7Z3Y9 468 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 WDR63Q8IWG1 891 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 FAM9BQ8IZU0 186 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 TTLL11Q8NHH1 800 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 MRGPRX2Q96LB1 330 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 TOR4AQ9NXH8 423 aa9.6□□□□□ -0.87
RBM39-238ENST00000493853 SHTN1A0MZ66 631 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 NEURL1BA8MQ27 555 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 VIL1P09327 827 aaKnown RBP9.59□□□□□ -0.87
RBM39-238ENST00000493853 SKOR1P84550 965 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 QPCTQ16769 361 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 TUSC1Q2TAM9 212 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 LYPD8Q6UX82 237 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 G2E3Q7L622 706 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 PODNQ7Z5L7 613 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 C2orf69Q8N8R5 385 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 DDRGK1Q96HY6 314 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 MPHOSPH8Q99549 860 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 UNC93B1Q9H1C4 597 aa9.59□□□□□ -0.87
RBM39-238ENST00000493853 BSDC1Q9NW68 430 aaPredicted RBP9.59□□□□□ -0.87
RBM39-238ENST00000493853 USP17L3A6NCW0 530 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 USP17L4A6NCW7 530 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 H7C1W4 665 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 LILRB3O75022 631 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 MAP2K2P36507 400 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 KCNJ4P48050 445 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 EXOSC9Q06265 439 aaKnown RBP9.58□□□□□ -0.88
RBM39-238ENST00000493853 GCKRQ14397 625 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 KIF4BQ2VIQ3 1234 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 USP17L1Q7RTZ2 530 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 SAPCD2Q86UD0 394 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 AGBL3Q8NEM8 1001 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 SNIP1Q8TAD8 396 aaKnown RBP9.58□□□□□ -0.88
RBM39-238ENST00000493853 DNAAF4Q8WXU2 420 aa9.58□□□□□ -0.88
RBM39-238ENST00000493853 FAM117AQ9C073 453 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms