RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 IRX6P78412 446 aaPredicted RBP15.23■□□□□ 0.03
UPF3A-210ENST00000493727 GPSM2P81274 684 aa15.23■□□□□ 0.03
UPF3A-210ENST00000493727 RGMBQ6NW40 437 aa15.23■□□□□ 0.03
UPF3A-210ENST00000493727 SLC4A10Q6U841 1118 aa15.23■□□□□ 0.03
UPF3A-210ENST00000493727 KRT26Q7Z3Y9 468 aa15.23■□□□□ 0.03
UPF3A-210ENST00000493727 DBNDD1Q9H9R9 158 aa15.23■□□□□ 0.03
UPF3A-210ENST00000493727 PODXL2Q9NZ53 605 aa15.23■□□□□ 0.03
UPF3A-210ENST00000493727 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
UPF3A-210ENST00000493727 F6X3S4 739 aa15.22■□□□□ 0.03
UPF3A-210ENST00000493727 NEXNQ0ZGT2 675 aa15.22■□□□□ 0.03
UPF3A-210ENST00000493727 PDE3AQ14432 1141 aa15.22■□□□□ 0.03
UPF3A-210ENST00000493727 TBC1D10BQ4KMP7 808 aaPredicted RBP15.22■□□□□ 0.03
UPF3A-210ENST00000493727 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
UPF3A-210ENST00000493727 PANK1Q8TE04 598 aa15.22■□□□□ 0.03
UPF3A-210ENST00000493727 ZC3H12CQ9C0D7 883 aaKnown RBP15.22■□□□□ 0.03
UPF3A-210ENST00000493727 GBA2Q9HCG7 927 aaPredicted RBP15.22■□□□□ 0.03
UPF3A-210ENST00000493727 POLLQ9UGP5 575 aa15.22■□□□□ 0.03
UPF3A-210ENST00000493727 TNNQ9UQP3 1299 aa15.22■□□□□ 0.03
UPF3A-210ENST00000493727 ZNF609O15014 1411 aa15.22■□□□□ 0.03
UPF3A-210ENST00000493727 ADM5C9JUS6 153 aa15.21■□□□□ 0.03
UPF3A-210ENST00000493727 ECE2O60344 883 aa15.21■□□□□ 0.03
UPF3A-210ENST00000493727 GCGRP47871 477 aa15.21■□□□□ 0.03
UPF3A-210ENST00000493727 C20orf194Q5TEA3 1177 aa15.21■□□□□ 0.03
UPF3A-210ENST00000493727 KSR2Q6VAB6 950 aa15.21■□□□□ 0.03
UPF3A-210ENST00000493727 ITPRIPQ8IWB1 547 aa15.21■□□□□ 0.03
UPF3A-210ENST00000493727 TBC1D16Q8TBP0 767 aa15.21■□□□□ 0.03
UPF3A-210ENST00000493727 DNAAF4Q8WXU2 420 aa15.21■□□□□ 0.03
UPF3A-210ENST00000493727 ANKIB1Q9P2G1 1089 aa15.21■□□□□ 0.03
UPF3A-210ENST00000493727 GGA1Q9UJY5 639 aa15.21■□□□□ 0.03
UPF3A-210ENST00000493727 MAP3K2Q9Y2U5 619 aa15.21■□□□□ 0.03
UPF3A-210ENST00000493727 ANKRD18AQ8IVF6 992 aa15.2■□□□□ 0.02
UPF3A-210ENST00000493727 CDC5LQ99459 802 aaKnown RBP15.2■□□□□ 0.02
UPF3A-210ENST00000493727 SEC31BQ9NQW1 1179 aa15.2■□□□□ 0.02
UPF3A-210ENST00000493727 KCNQ5Q9NR82 932 aa15.2■□□□□ 0.02
UPF3A-210ENST00000493727 PAPPA2Q9BXP8 1791 aa15.19■□□□□ 0.02
UPF3A-210ENST00000493727 UFL1O94874 794 aa15.19■□□□□ 0.02
UPF3A-210ENST00000493727 CCT4P50991 539 aaKnown RBP15.19■□□□□ 0.02
UPF3A-210ENST00000493727 KIF23Q02241 960 aaPredicted RBP15.19■□□□□ 0.02
UPF3A-210ENST00000493727 KMT5BQ4FZB7 885 aa15.19■□□□□ 0.02
UPF3A-210ENST00000493727 TMEM57Q8N5G2 664 aa15.19■□□□□ 0.02
UPF3A-210ENST00000493727 COG6Q9Y2V7 657 aa15.19■□□□□ 0.02
UPF3A-210ENST00000493727 ZNF646O15015 1829 aaPredicted RBP15.19■□□□□ 0.02
UPF3A-210ENST00000493727 MKI67P46013 3256 aaKnown RBP15.19■□□□□ 0.02
UPF3A-210ENST00000493727 XDHP47989 1333 aa15.18■□□□□ 0.02
UPF3A-210ENST00000493727 ACTN4O43707 911 aaKnown RBP15.18■□□□□ 0.02
UPF3A-210ENST00000493727 RLBP1P12271 317 aa15.18■□□□□ 0.02
UPF3A-210ENST00000493727 KIF4BQ2VIQ3 1234 aa15.18■□□□□ 0.02
UPF3A-210ENST00000493727 C2orf69Q8N8R5 385 aa15.18■□□□□ 0.02
UPF3A-210ENST00000493727 DCPSQ96C86 337 aaKnown RBP15.18■□□□□ 0.02
UPF3A-210ENST00000493727 CRBNQ96SW2 442 aa15.18■□□□□ 0.02
UPF3A-210ENST00000493727 PRR14Q9BWN1 585 aa15.18■□□□□ 0.02
UPF3A-210ENST00000493727 RNF186Q9NXI6 227 aa15.18■□□□□ 0.02
UPF3A-210ENST00000493727 GGA3Q9NZ52 723 aa15.18■□□□□ 0.02
UPF3A-210ENST00000493727 HTTP42858 3142 aa15.18■□□□□ 0.02
UPF3A-210ENST00000493727 ASTN2O75129 1339 aaPredicted RBP15.17■□□□□ 0.02
UPF3A-210ENST00000493727 SPEF2Q9C093 1822 aa15.17■□□□□ 0.02
UPF3A-210ENST00000493727 VIL1P09327 827 aaKnown RBP15.17■□□□□ 0.02
UPF3A-210ENST00000493727 ATP2B4P23634 1241 aa15.17■□□□□ 0.02
UPF3A-210ENST00000493727 ZNF157P51786 506 aaPredicted RBP15.17■□□□□ 0.02
UPF3A-210ENST00000493727 CTSWP56202 376 aa15.17■□□□□ 0.02
UPF3A-210ENST00000493727 MVPQ14764 893 aaKnown RBP15.17■□□□□ 0.02
UPF3A-210ENST00000493727 SRCIN1Q9C0H9 1055 aa15.17■□□□□ 0.02
UPF3A-210ENST00000493727 TRPA1O75762 1119 aa15.16■□□□□ 0.02
UPF3A-210ENST00000493727 IGKV5-2P06315 115 aa15.16■□□□□ 0.02
UPF3A-210ENST00000493727 AGBL3Q8NEM8 1001 aa15.16■□□□□ 0.02
UPF3A-210ENST00000493727 CSRNP1Q96S65 589 aa15.16■□□□□ 0.02
UPF3A-210ENST00000493727 DDX19BQ9UMR2 479 aa15.16■□□□□ 0.02
UPF3A-210ENST00000493727 NEURL1BA8MQ27 555 aa15.15■□□□□ 0.02
UPF3A-210ENST00000493727 SOX10P56693 466 aa15.15■□□□□ 0.02
UPF3A-210ENST00000493727 ZNF280AP59817 542 aaPredicted RBP15.15■□□□□ 0.02
UPF3A-210ENST00000493727 RASAL3Q86YV0 1011 aa15.15■□□□□ 0.02
UPF3A-210ENST00000493727 CDCA5Q96FF9 252 aa15.15■□□□□ 0.02
UPF3A-210ENST00000493727 CCDC85AQ96PX6 553 aaPredicted RBP15.15■□□□□ 0.02
UPF3A-210ENST00000493727 KDM4CQ9H3R0 1056 aa15.15■□□□□ 0.02
UPF3A-210ENST00000493727 CHMP4BQ9H444 224 aaKnown RBP15.15■□□□□ 0.02
UPF3A-210ENST00000493727 BSDC1Q9NW68 430 aaPredicted RBP15.15■□□□□ 0.02
UPF3A-210ENST00000493727 BRCA2P51587 3418 aa15.15■□□□□ 0.02
UPF3A-210ENST00000493727 CENPFP49454 3210 aa15.15■□□□□ 0.02
UPF3A-210ENST00000493727 BEND3Q5T5X7 828 aa15.14■□□□□ 0.01
UPF3A-210ENST00000493727 INTS3Q68E01 1043 aaKnown RBP15.14■□□□□ 0.01
UPF3A-210ENST00000493727 PODNQ7Z5L7 613 aa15.14■□□□□ 0.01
UPF3A-210ENST00000493727 LINS1Q8NG48 757 aa15.14■□□□□ 0.01
UPF3A-210ENST00000493727 TTLL11Q8NHH1 800 aa15.14■□□□□ 0.01
UPF3A-210ENST00000493727 JARID2Q92833 1246 aaPredicted RBP15.14■□□□□ 0.01
UPF3A-210ENST00000493727 ALDH1L1O75891 902 aa15.13■□□□□ 0.01
UPF3A-210ENST00000493727 RSBN1LQ6PCB5 846 aaPredicted RBP15.13■□□□□ 0.01
UPF3A-210ENST00000493727 CTU1Q7Z7A3 348 aaKnown RBP15.13■□□□□ 0.01
UPF3A-210ENST00000493727 EXOC6Q8TAG9 804 aa15.13■□□□□ 0.01
UPF3A-210ENST00000493727 GMLQ99445 158 aa15.13■□□□□ 0.01
UPF3A-210ENST00000493727 PLA2G12BQ9BX93 195 aa15.13■□□□□ 0.01
UPF3A-210ENST00000493727 MED23Q9ULK4 1368 aa15.12■□□□□ 0.01
UPF3A-210ENST00000493727 USP17L3A6NCW0 530 aa15.12■□□□□ 0.01
UPF3A-210ENST00000493727 USP17L4A6NCW7 530 aa15.12■□□□□ 0.01
UPF3A-210ENST00000493727 H7C1W4 665 aa15.12■□□□□ 0.01
UPF3A-210ENST00000493727 IGHMBP2P38935 993 aaKnown RBP15.12■□□□□ 0.01
UPF3A-210ENST00000493727 FKBP1BP68106 108 aa15.12■□□□□ 0.01
UPF3A-210ENST00000493727 CWF19L2Q2TBE0 894 aaKnown RBP15.12■□□□□ 0.01
UPF3A-210ENST00000493727 USP17L1Q7RTZ2 530 aa15.12■□□□□ 0.01
UPF3A-210ENST00000493727 UBE3BQ7Z3V4 1068 aa15.12■□□□□ 0.01
UPF3A-210ENST00000493727 GREM2Q9H772 168 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms