RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 C1orf115Q9H7X2 142 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 EMILIN1Q9Y6C2 1016 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 MRPL12P52815 198 aaKnown RBP7.82□□□□□ -1.16
VPS13B-205ENST00000493587 GNG11P61952 73 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 MTRQ99707 1265 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 BLOC1S6Q9UL45 172 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 CCDC151A5D8V7 595 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 GSDMDP57764 484 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 GNAI1P63096 354 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 MICALCLQ6ZW33 695 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 PLA2G4DQ86XP0 818 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 FAM114A1Q8IWE2 563 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 FMNL2Q96PY5 1086 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 YIPF2Q9BWQ6 316 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 TSPYL2Q9H2G4 693 aaPredicted RBP7.82□□□□□ -1.16
VPS13B-205ENST00000493587 ZBTB40Q9NUA8 1239 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 LAMB2P55268 1798 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 NDUFAB1O14561 156 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 RNF40O75150 1001 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 VAMP4O75379 141 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 FMNL1O95466 1100 aaPredicted RBP7.82□□□□□ -1.16
VPS13B-205ENST00000493587 BRD3Q15059 726 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 ACBD5Q5T8D3 534 aaPredicted RBP7.82□□□□□ -1.16
VPS13B-205ENST00000493587 TMC6Q7Z403 805 aa7.82□□□□□ -1.16
VPS13B-205ENST00000493587 MYH15Q9Y2K3 1946 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 GOLGA6L7A0A1B0GV03 622 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 DNM1Q05193 864 aaKnown RBP7.81□□□□□ -1.16
VPS13B-205ENST00000493587 SLC5A9Q2M3M2 681 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 DDX46Q7L014 1031 aaKnown RBP7.81□□□□□ -1.16
VPS13B-205ENST00000493587 TBC1D31Q96DN5 1066 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 PUF60Q9UHX1 559 aaKnown RBP7.81□□□□□ -1.16
VPS13B-205ENST00000493587 TPCN1Q9ULQ1 816 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 RHOXF2BP0C7M4 288 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 MYBL1P10243 752 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 NCAPG2Q86XI2 1143 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 ARHGAP45Q92619 1136 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 RHOXF2Q9BQY4 288 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 FUCA2Q9BTY2 467 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 ZCWPW1Q9H0M4 648 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 DACT1Q9NYF0 836 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 PCDHGA4Q9Y5G9 962 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 ARAP2Q8WZ64 1704 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 ROBO1Q9Y6N7 1651 aa7.81□□□□□ -1.16
VPS13B-205ENST00000493587 LRP6O75581 1613 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 BUB1BO60566 1050 aaPredicted RBP7.8□□□□□ -1.16
VPS13B-205ENST00000493587 SMIM24O75264 130 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 SCNN1BP51168 640 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 DDR1Q08345 913 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 EIF4A2Q14240 407 aaKnown RBP7.8□□□□□ -1.16
VPS13B-205ENST00000493587 NFE2L2Q16236 605 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 CCDC40Q4G0X9 1142 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 TMEM57Q8N5G2 664 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 MRPL50Q8N5N7 158 aaKnown RBP7.8□□□□□ -1.16
VPS13B-205ENST00000493587 RABGGTAQ92696 567 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 RUFY1Q96T51 708 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 MMADHCQ9H3L0 296 aaPredicted RBP7.8□□□□□ -1.16
VPS13B-205ENST00000493587 SUGCTQ9HAC7 445 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 ATP2C2O75185 946 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 ATP6V1G1O75348 118 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 TUBB4AP04350 444 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 ZSCAN22P10073 491 aaPredicted RBP7.8□□□□□ -1.16
VPS13B-205ENST00000493587 TRIM27P14373 513 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 CCZ1BP86790 482 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 CCZ1P86791 482 aaPredicted RBP7.8□□□□□ -1.16
VPS13B-205ENST00000493587 FILIP1LQ4L180 1135 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 AMOTQ4VCS5 1084 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 FAM76AQ8TAV0 307 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 TSC22D3Q99576 134 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 RGL1Q9NZL6 768 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 RIPOR2Q9Y4F9 1068 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 LAMA4Q16363 1823 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 ZSCAN12O43309 604 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 RTN2O75298 545 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 WDHD1O75717 1129 aaPredicted RBP7.8□□□□□ -1.16
VPS13B-205ENST00000493587 ZNF189O75820 626 aaPredicted RBP7.8□□□□□ -1.16
VPS13B-205ENST00000493587 IMPDH2P12268 514 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 TXLNAP40222 546 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 ARHGAP25P42331 645 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 B4GALNT4Q76KP1 1039 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 ARHGAP22Q7Z5H3 698 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 SIRT2Q8IXJ6 389 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 SYCP3Q8IZU3 236 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 PLEKHG4BQ96PX9 1271 aa7.8□□□□□ -1.16
VPS13B-205ENST00000493587 THUMPD2Q9BTF0 503 aaKnown RBP7.8□□□□□ -1.16
VPS13B-205ENST00000493587 DTNBO60941 627 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 FAM163BP0C2L3 166 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 PDHBP11177 359 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 CCDC93Q567U6 631 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 CCDC178Q5BJE1 867 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 PHACTR1Q9C0D0 580 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 DDX20Q9UHI6 824 aaKnown RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 HOOK1Q9UJC3 728 aaKnown RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 COL5A3P25940 1745 aaPredicted RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 FLT4P35916 1363 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 EPB41L2O43491 1005 aaKnown RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 STX6O43752 255 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 DIAPH1O60610 1272 aaKnown RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 RTN3O95197 1032 aaPredicted RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 MYL1P05976 194 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 CDC25CP30307 473 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms