RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 CAPNS2Q96L46 248 aa20.76■□□□□ 0.91
LIME1-208ENST00000493265 MAST2Q6P0Q8 1798 aa20.75■□□□□ 0.91
LIME1-208ENST00000493265 H7C1D1 291 aa20.75■□□□□ 0.91
LIME1-208ENST00000493265 ADD2P35612 726 aa20.75■□□□□ 0.91
LIME1-208ENST00000493265 CRKP46108 304 aa20.75■□□□□ 0.91
LIME1-208ENST00000493265 LRRFIP1Q32MZ4 808 aaKnown RBP20.75■□□□□ 0.91
LIME1-208ENST00000493265 CYP4F22Q6NT55 531 aa20.75■□□□□ 0.91
LIME1-208ENST00000493265 DPF2Q92785 391 aa20.75■□□□□ 0.91
LIME1-208ENST00000493265 TEKT1Q969V4 418 aa20.75■□□□□ 0.91
LIME1-208ENST00000493265 GPRC5DQ9NZD1 345 aa20.75■□□□□ 0.91
LIME1-208ENST00000493265 PCDHAC2Q9Y5I4 1007 aa20.75■□□□□ 0.91
LIME1-208ENST00000493265 CFAP100Q494V2 611 aa20.74■□□□□ 0.91
LIME1-208ENST00000493265 TBC1D10BQ4KMP7 808 aaPredicted RBP20.74■□□□□ 0.91
LIME1-208ENST00000493265 CST9Q5W186 159 aa20.74■□□□□ 0.91
LIME1-208ENST00000493265 ADGRA1Q86SQ6 560 aa20.74■□□□□ 0.91
LIME1-208ENST00000493265 SLF2Q8IX21 1173 aa20.74■□□□□ 0.91
LIME1-208ENST00000493265 MIGA1Q8NAN2 632 aa20.74■□□□□ 0.91
LIME1-208ENST00000493265 ADARB2Q9NS39 739 aaKnown RBP20.74■□□□□ 0.91
LIME1-208ENST00000493265 DIAPH3Q9NSV4 1193 aa20.74■□□□□ 0.91
LIME1-208ENST00000493265 MYH7P12883 1935 aa20.73■□□□□ 0.91
LIME1-208ENST00000493265 LDHCP07864 332 aa20.73■□□□□ 0.91
LIME1-208ENST00000493265 ZFYP08048 801 aaPredicted RBP20.73■□□□□ 0.91
LIME1-208ENST00000493265 SAMD7Q7Z3H4 446 aa20.73■□□□□ 0.91
LIME1-208ENST00000493265 MYOZ2Q9NPC6 264 aa20.73■□□□□ 0.91
LIME1-208ENST00000493265 DAGLAQ9Y4D2 1042 aa20.73■□□□□ 0.91
LIME1-208ENST00000493265 MROH7-TTC4A0A0A0MT08 1334 aa20.73■□□□□ 0.91
LIME1-208ENST00000493265 TCRBV5S4A2TA0A5A2 114 aa20.72■□□□□ 0.91
LIME1-208ENST00000493265 ECE1P42892 770 aa20.72■□□□□ 0.91
LIME1-208ENST00000493265 NMIQ13287 307 aaPredicted RBP20.72■□□□□ 0.91
LIME1-208ENST00000493265 DLGAP5Q15398 846 aa20.72■□□□□ 0.91
LIME1-208ENST00000493265 FAM227BQ96M60 508 aa20.72■□□□□ 0.91
LIME1-208ENST00000493265 SEC62Q99442 399 aaKnown RBP20.72■□□□□ 0.91
LIME1-208ENST00000493265 NOL10Q9BSC4 688 aaKnown RBP20.72■□□□□ 0.91
LIME1-208ENST00000493265 SERPINA10Q9UK55 444 aa20.72■□□□□ 0.91
LIME1-208ENST00000493265 MYH2Q9UKX2 1941 aa20.72■□□□□ 0.91
LIME1-208ENST00000493265 EGFRP00533 1210 aa20.71■□□□□ 0.91
LIME1-208ENST00000493265 BTDP43251 543 aa20.71■□□□□ 0.91
LIME1-208ENST00000493265 ZNF280AP59817 542 aaPredicted RBP20.71■□□□□ 0.91
LIME1-208ENST00000493265 DYNLL1P63167 89 aaKnown RBP20.71■□□□□ 0.91
LIME1-208ENST00000493265 UBE3CQ15386 1083 aa20.71■□□□□ 0.91
LIME1-208ENST00000493265 HHIPL2Q6UWX4 724 aa20.71■□□□□ 0.91
LIME1-208ENST00000493265 CWC27Q6UX04 472 aaKnown RBP20.71■□□□□ 0.91
LIME1-208ENST00000493265 AATFQ9NY61 560 aaKnown RBP eCLIP20.71■□□□□ 0.91
LIME1-208ENST00000493265 TLL2Q9Y6L7 1015 aa20.71■□□□□ 0.91
LIME1-208ENST00000493265 A0A0D9SFI3 127 aa20.7■□□□□ 0.9
LIME1-208ENST00000493265 HIP1O00291 1037 aa20.7■□□□□ 0.9
LIME1-208ENST00000493265 CDC45O75419 566 aa20.7■□□□□ 0.9
LIME1-208ENST00000493265 CHMLP26374 656 aa20.7■□□□□ 0.9
LIME1-208ENST00000493265 HDLBPQ00341 1268 aaKnown RBP20.7■□□□□ 0.9
LIME1-208ENST00000493265 KIF4BQ2VIQ3 1234 aa20.7■□□□□ 0.9
LIME1-208ENST00000493265 APPBP2Q92624 585 aa20.7■□□□□ 0.9
LIME1-208ENST00000493265 BEGAINQ9BUH8 593 aa20.7■□□□□ 0.9
LIME1-208ENST00000493265 GLIS2Q9BZE0 524 aaPredicted RBP20.7■□□□□ 0.9
LIME1-208ENST00000493265 MAGEB6P1A0A0J9YX57 407 aa20.69■□□□□ 0.9
LIME1-208ENST00000493265 M0R2C6 588 aa20.69■□□□□ 0.9
LIME1-208ENST00000493265 AOC2O75106 756 aa20.69■□□□□ 0.9
LIME1-208ENST00000493265 CELF2O95319 508 aaKnown RBP20.69■□□□□ 0.9
LIME1-208ENST00000493265 ZMYM1Q5SVZ6 1142 aa20.69■□□□□ 0.9
LIME1-208ENST00000493265 CCDC129Q6ZRS4 1044 aa20.69■□□□□ 0.9
LIME1-208ENST00000493265 TRPM4Q8TD43 1214 aa20.69■□□□□ 0.9
LIME1-208ENST00000493265 OSBP2Q969R2 916 aa20.69■□□□□ 0.9
LIME1-208ENST00000493265 ABHD8Q96I13 439 aa20.69■□□□□ 0.9
LIME1-208ENST00000493265 PRMT6Q96LA8 375 aaPredicted RBP20.69■□□□□ 0.9
LIME1-208ENST00000493265 ZDHHC15Q96MV8 337 aa20.69■□□□□ 0.9
LIME1-208ENST00000493265 PUS7LQ9H0K6 701 aaKnown RBP20.69■□□□□ 0.9
LIME1-208ENST00000493265 RFX7Q2KHR2 1363 aa20.69■□□□□ 0.9
LIME1-208ENST00000493265 MBD4O95243 580 aa20.68■□□□□ 0.9
LIME1-208ENST00000493265 BAG3O95817 575 aa20.68■□□□□ 0.9
LIME1-208ENST00000493265 NBPF9Q3BBW0 867 aa20.68■□□□□ 0.9
LIME1-208ENST00000493265 CASC1Q6TDU7 716 aa20.68■□□□□ 0.9
LIME1-208ENST00000493265 MRIQ9BWK5 157 aa20.68■□□□□ 0.9
LIME1-208ENST00000493265 TDRD3Q9H7E2 651 aaKnown RBP20.68■□□□□ 0.9
LIME1-208ENST00000493265 ARMT1Q9H993 441 aa20.68■□□□□ 0.9
LIME1-208ENST00000493265 ZNF408Q9H9D4 720 aa20.68■□□□□ 0.9
LIME1-208ENST00000493265 USP40Q9NVE5 1235 aa20.68■□□□□ 0.9
LIME1-208ENST00000493265 TSKSQ9UJT2 592 aa20.68■□□□□ 0.9
LIME1-208ENST00000493265 GAKO14976 1311 aa20.68■□□□□ 0.9
LIME1-208ENST00000493265 GPR75-ASB3A0A0A6YYF3 556 aa20.67■□□□□ 0.9
LIME1-208ENST00000493265 CLRN2A0PK11 232 aa20.67■□□□□ 0.9
LIME1-208ENST00000493265 SPDYE2BA6NHP3 402 aa20.67■□□□□ 0.9
LIME1-208ENST00000493265 IGSF3O75054 1194 aa20.67■□□□□ 0.9
LIME1-208ENST00000493265 SPDYE6P0CI01 402 aa20.67■□□□□ 0.9
LIME1-208ENST00000493265 APOBEC3HQ6NTF7 200 aaKnown RBP20.67■□□□□ 0.9
LIME1-208ENST00000493265 LCORLQ8N3X6 602 aa20.67■□□□□ 0.9
LIME1-208ENST00000493265 SH3RF3Q8TEJ3 882 aaPredicted RBP20.67■□□□□ 0.9
LIME1-208ENST00000493265 FAM163AQ96GL9 167 aaPredicted RBP20.67■□□□□ 0.9
LIME1-208ENST00000493265 MMP14P50281 582 aa20.66■□□□□ 0.9
LIME1-208ENST00000493265 CACNB3P54284 484 aa20.66■□□□□ 0.9
LIME1-208ENST00000493265 CDC42EP5Q6NZY7 148 aa20.66■□□□□ 0.9
LIME1-208ENST00000493265 HELLSQ9NRZ9 838 aa20.66■□□□□ 0.9
LIME1-208ENST00000493265 ASTN2O75129 1339 aaPredicted RBP20.65■□□□□ 0.9
LIME1-208ENST00000493265 WNT10BO00744 389 aa20.65■□□□□ 0.9
LIME1-208ENST00000493265 HIRAP54198 1017 aaPredicted RBP20.65■□□□□ 0.9
LIME1-208ENST00000493265 MCMDC2Q4G0Z9 681 aa20.65■□□□□ 0.9
LIME1-208ENST00000493265 TMED8Q6PL24 325 aaPredicted RBP20.65■□□□□ 0.9
LIME1-208ENST00000493265 SAPCD2Q86UD0 394 aa20.65■□□□□ 0.9
LIME1-208ENST00000493265 MTMR14Q8NCE2 650 aa20.65■□□□□ 0.9
LIME1-208ENST00000493265 RUFY2Q8WXA3 655 aa20.65■□□□□ 0.9
LIME1-208ENST00000493265 VEZTQ9HBM0 779 aa20.65■□□□□ 0.9
LIME1-208ENST00000493265 GPAA1O43292 621 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms