RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 PPP1R12BO60237 982 aaPredicted RBP7.3□□□□□ -1.24
NF1-215ENST00000493220 KRT18P05783 430 aaKnown RBP7.3□□□□□ -1.24
NF1-215ENST00000493220 IARSP41252 1262 aaKnown RBP7.3□□□□□ -1.24
NF1-215ENST00000493220 PTPN12Q05209 780 aaKnown RBP7.3□□□□□ -1.24
NF1-215ENST00000493220 TMEM266Q2M3C6 531 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 OTUD7BQ6GQQ9 843 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 TGFBRAP1Q8WUH2 860 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 DBNDD1Q9H9R9 158 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 WDR70Q9NW82 654 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 RNF181Q9P0P0 153 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 MINPP1Q9UNW1 487 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 ATP6V0A2Q9Y487 856 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 CD2APQ9Y5K6 639 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 RPAP1Q9BWH6 1393 aaPredicted RBP7.29□□□□□ -1.24
NF1-215ENST00000493220 PARP1P09874 1014 aaKnown RBP7.29□□□□□ -1.24
NF1-215ENST00000493220 POTEAQ6S8J7 498 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 PUS3Q9BZE2 481 aaKnown RBP7.29□□□□□ -1.24
NF1-215ENST00000493220 TSHZ2Q9NRE2 1034 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 PRC1O43663 620 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 GYS1P13807 737 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 GPSM2P81274 684 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 LZTS2Q9BRK4 669 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 CCDC194A0A1B0GVG4 234 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 PPP4R3AQ6IN85 833 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 APOBEC3FQ8IUX4 373 aaKnown RBP7.29□□□□□ -1.24
NF1-215ENST00000493220 KIAA0825Q8IV33 1275 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 GPATCH11Q8N954 259 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 C8orf76Q96K31 380 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 DHX36Q9H2U1 1008 aaKnown RBP7.29□□□□□ -1.24
NF1-215ENST00000493220 ARHGEF6Q15052 776 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 CREB3L3Q68CJ9 461 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 GLT8D2Q9H1C3 349 aa7.29□□□□□ -1.24
NF1-215ENST00000493220 CIZ1Q9ULV3 898 aaPredicted RBP7.29□□□□□ -1.24
NF1-215ENST00000493220 FOXO4P98177 505 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 RAB3GAP1Q15042 981 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 VPS33BQ9H267 617 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 BMP2KQ9NSY1 1161 aaPredicted RBP7.28□□□□□ -1.24
NF1-215ENST00000493220 R3HCC1Q9Y3T6 440 aaKnown RBP7.28□□□□□ -1.24
NF1-215ENST00000493220 TPM3P06753 285 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 CALRP27797 417 aaKnown RBP7.28□□□□□ -1.24
NF1-215ENST00000493220 GRM1Q13255 1194 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 PPP2R5BQ15173 497 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 OLFM4Q6UX06 510 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 ATP8A2Q9NTI2 1148 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 KLF18A0A0U1RQI7 1052 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 ZBED4O75132 1171 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 PHKA1P46020 1223 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 KRT85P78386 507 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 PIBF1Q8WXW3 757 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 TCP10L2B9ZVM9 353 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 TPM1P09493 284 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 USP17L8P0C7I0 530 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 IREB2P48200 963 aaKnown RBP7.28□□□□□ -1.24
NF1-215ENST00000493220 MAPKAPK5Q8IW41 473 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 STAP2Q9UGK3 403 aa7.28□□□□□ -1.24
NF1-215ENST00000493220 DDX49Q9Y6V7 483 aaKnown RBP7.28□□□□□ -1.24
NF1-215ENST00000493220 GOLGA6L19H0YKK7 550 aa7.27□□□□□ -1.24
NF1-215ENST00000493220 PDE6AP16499 860 aa7.27□□□□□ -1.24
NF1-215ENST00000493220 KIF22Q14807 665 aa7.27□□□□□ -1.24
NF1-215ENST00000493220 AOC3Q16853 763 aa7.27□□□□□ -1.24
NF1-215ENST00000493220 SLC10A5Q5PT55 438 aa7.27□□□□□ -1.24
NF1-215ENST00000493220 CCDC83Q8IWF9 413 aa7.27□□□□□ -1.24
NF1-215ENST00000493220 EAF2Q96CJ1 260 aaPredicted RBP7.27□□□□□ -1.24
NF1-215ENST00000493220 PYM1Q9BRP8 204 aaKnown RBP7.27□□□□□ -1.24
NF1-215ENST00000493220 NAT10Q9H0A0 1025 aaKnown RBP7.27□□□□□ -1.24
NF1-215ENST00000493220 C6orf50Q9HD87 102 aa7.27□□□□□ -1.24
NF1-215ENST00000493220 CCDC39Q9UFE4 941 aa7.27□□□□□ -1.24
NF1-215ENST00000493220 DPEP1P16444 411 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 SCNN1DP51172 638 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 USP14P54578 494 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 PDIA6Q15084 440 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 RABL6Q3YEC7 729 aaPredicted RBP7.27□□□□□ -1.25
NF1-215ENST00000493220 DHX32Q7L7V1 743 aaKnown RBP7.27□□□□□ -1.25
NF1-215ENST00000493220 UTYO14607 1347 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 ATP2B1P20020 1258 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 PPARAQ07869 468 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 SASS6Q6UVJ0 657 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 MICU3Q86XE3 530 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 SLC5A4Q9NY91 659 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 ZNRF3Q9ULT6 936 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 A0A0G2JLW4 131 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 RAD17O75943 681 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 RPS12P25398 132 aaKnown RBP7.27□□□□□ -1.25
NF1-215ENST00000493220 CHRNA5P30532 468 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 FAM193AP78312 1265 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 FOXD4L6Q3SYB3 417 aaPredicted RBP7.27□□□□□ -1.25
NF1-215ENST00000493220 FOXD4L3Q6VB84 417 aaPredicted RBP7.27□□□□□ -1.25
NF1-215ENST00000493220 DACH1Q9UI36 760 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 BRPF3Q9ULD4 1205 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 SHPRHQ149N8 1683 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 ALS2Q96Q42 1657 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 COL16A1Q07092 1604 aaPredicted RBP7.27□□□□□ -1.25
NF1-215ENST00000493220 BMP15O95972 392 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 CSF1RP07333 972 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 CALML3P27482 149 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 ADORA1P30542 326 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 TCP10Q12799 353 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 TSR1Q2NL82 804 aaKnown RBP7.27□□□□□ -1.25
NF1-215ENST00000493220 SMARCC2Q8TAQ2 1214 aa7.27□□□□□ -1.25
NF1-215ENST00000493220 CCDC17Q96LX7 622 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms