RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 WDR66Q8TBY9 1149 aa16.3■□□□□ 0.2
MSH6-208ENST00000493177 PI4K2BQ8TCG2 481 aa16.3■□□□□ 0.2
MSH6-208ENST00000493177 ZBED3Q96IU2 234 aaPredicted RBP16.3■□□□□ 0.2
MSH6-208ENST00000493177 PRMT6Q96LA8 375 aaPredicted RBP16.3■□□□□ 0.2
MSH6-208ENST00000493177 PPP2R3BQ9Y5P8 575 aa16.3■□□□□ 0.2
MSH6-208ENST00000493177 TRIM6-TRIM34B2RNG4 842 aa16.29■□□□□ 0.2
MSH6-208ENST00000493177 ARID4AP29374 1257 aaPredicted RBP16.29■□□□□ 0.2
MSH6-208ENST00000493177 TNNI2P48788 182 aa16.29■□□□□ 0.2
MSH6-208ENST00000493177 LBX1P52954 281 aa16.29■□□□□ 0.2
MSH6-208ENST00000493177 MOB2Q70IA6 237 aa16.29■□□□□ 0.2
MSH6-208ENST00000493177 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.29■□□□□ 0.2
MSH6-208ENST00000493177 TEKT1Q969V4 418 aa16.29■□□□□ 0.2
MSH6-208ENST00000493177 DEFB129Q9H1M3 183 aa16.29■□□□□ 0.2
MSH6-208ENST00000493177 SNRKQ9NRH2 765 aa16.29■□□□□ 0.2
MSH6-208ENST00000493177 TMOD2Q9NZR1 351 aa16.29■□□□□ 0.2
MSH6-208ENST00000493177 AK9Q5TCS8 1911 aa16.29■□□□□ 0.2
MSH6-208ENST00000493177 UBE2Q2LH0YL09 131 aa16.28■□□□□ 0.2
MSH6-208ENST00000493177 MCAMP43121 646 aa16.28■□□□□ 0.2
MSH6-208ENST00000493177 ZNF512BQ96KM6 892 aaPredicted RBP16.28■□□□□ 0.2
MSH6-208ENST00000493177 TDRD3Q9H7E2 651 aaKnown RBP16.28■□□□□ 0.2
MSH6-208ENST00000493177 DENND2AQ9ULE3 1009 aa16.28■□□□□ 0.2
MSH6-208ENST00000493177 ANGEL1Q9UNK9 670 aaKnown RBP16.28■□□□□ 0.2
MSH6-208ENST00000493177 PPP1R12BO60237 982 aaPredicted RBP16.27■□□□□ 0.2
MSH6-208ENST00000493177 SLC10A3P09131 477 aa16.27■□□□□ 0.2
MSH6-208ENST00000493177 RASGRF1Q13972 1273 aa16.27■□□□□ 0.2
MSH6-208ENST00000493177 SUPT20HL1Q3ZLR7 823 aa16.27■□□□□ 0.2
MSH6-208ENST00000493177 IFFO2Q5TF58 517 aa16.27■□□□□ 0.2
MSH6-208ENST00000493177 SPATA5Q8NB90 893 aa16.27■□□□□ 0.2
MSH6-208ENST00000493177 RILPL2Q969X0 211 aa16.27■□□□□ 0.2
MSH6-208ENST00000493177 HAUS7Q99871 368 aa16.27■□□□□ 0.2
MSH6-208ENST00000493177 HMG20BQ9P0W2 317 aa16.27■□□□□ 0.2
MSH6-208ENST00000493177 ZNF70Q9UC06 446 aaPredicted RBP16.27■□□□□ 0.2
MSH6-208ENST00000493177 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.2
MSH6-208ENST00000493177 MYH2Q9UKX2 1941 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 GOLIM4O00461 696 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 SEMA3EO15041 775 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 CA12O43570 354 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 HSPA8P11142 646 aaKnown RBP16.26■□□□□ 0.19
MSH6-208ENST00000493177 GSPT1P15170 499 aaKnown RBP16.26■□□□□ 0.19
MSH6-208ENST00000493177 ZAP70P43403 619 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 KIF23Q02241 960 aaPredicted RBP16.26■□□□□ 0.19
MSH6-208ENST00000493177 GRIK5Q16478 980 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 PI16Q6UXB8 463 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 RASAL3Q86YV0 1011 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 PRDM10Q9NQV6 1147 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 TSKSQ9UJT2 592 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 SUGT1Q9Y2Z0 365 aa16.26■□□□□ 0.19
MSH6-208ENST00000493177 FAM155AB1AL88 458 aaPredicted RBP16.25■□□□□ 0.19
MSH6-208ENST00000493177 LDHBP07195 334 aaKnown RBP16.25■□□□□ 0.19
MSH6-208ENST00000493177 HDLBPQ00341 1268 aaKnown RBP16.25■□□□□ 0.19
MSH6-208ENST00000493177 RASA3Q14644 834 aa16.25■□□□□ 0.19
MSH6-208ENST00000493177 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
MSH6-208ENST00000493177 ZGPATQ8N5A5 531 aaKnown RBP16.25■□□□□ 0.19
MSH6-208ENST00000493177 EDC3Q96F86 508 aaKnown RBP16.25■□□□□ 0.19
MSH6-208ENST00000493177 PAG1Q9NWQ8 432 aa16.25■□□□□ 0.19
MSH6-208ENST00000493177 MKRN3Q13064 507 aaKnown RBP16.24■□□□□ 0.19
MSH6-208ENST00000493177 BMP2KLQ5H9B9 411 aa16.24■□□□□ 0.19
MSH6-208ENST00000493177 ZIC5Q96T25 663 aa16.24■□□□□ 0.19
MSH6-208ENST00000493177 SDSP20132 328 aa16.23■□□□□ 0.19
MSH6-208ENST00000493177 IREB2P48200 963 aaKnown RBP16.23■□□□□ 0.19
MSH6-208ENST00000493177 TTF1Q15361 905 aaPredicted RBP16.23■□□□□ 0.19
MSH6-208ENST00000493177 EVI5LQ96CN4 794 aa16.23■□□□□ 0.19
MSH6-208ENST00000493177 FSD1Q9BTV5 496 aa16.23■□□□□ 0.19
MSH6-208ENST00000493177 ABCF2Q9UG63 623 aa16.23■□□□□ 0.19
MSH6-208ENST00000493177 FZD1Q9UP38 647 aa16.23■□□□□ 0.19
MSH6-208ENST00000493177 CAPN15O75808 1086 aa16.22■□□□□ 0.19
MSH6-208ENST00000493177 CYP2E1P05181 493 aaPredicted RBP16.22■□□□□ 0.19
MSH6-208ENST00000493177 PRDX5P30044 214 aa16.22■□□□□ 0.19
MSH6-208ENST00000493177 CACNB3P54284 484 aa16.22■□□□□ 0.19
MSH6-208ENST00000493177 NBPF12Q5TAG4 269 aaPredicted RBP16.22■□□□□ 0.19
MSH6-208ENST00000493177 TBC1D9Q6ZT07 1266 aa16.22■□□□□ 0.19
MSH6-208ENST00000493177 DZIP1Q86YF9 867 aaKnown RBP16.22■□□□□ 0.19
MSH6-208ENST00000493177 REM2Q8IYK8 340 aaPredicted RBP16.22■□□□□ 0.19
MSH6-208ENST00000493177 ZDHHC15Q96MV8 337 aa16.22■□□□□ 0.19
MSH6-208ENST00000493177 ANTXR1Q9H6X2 564 aa16.22■□□□□ 0.19
MSH6-208ENST00000493177 PDS5AQ29RF7 1337 aaKnown RBP16.21■□□□□ 0.19
MSH6-208ENST00000493177 OTOFQ9HC10 1997 aa16.21■□□□□ 0.19
MSH6-208ENST00000493177 CASP8AP2Q9UKL3 1982 aa16.21■□□□□ 0.19
MSH6-208ENST00000493177 SPTY2D1Q68D10 685 aaPredicted RBP16.21■□□□□ 0.19
MSH6-208ENST00000493177 HHIPL2Q6UWX4 724 aa16.21■□□□□ 0.19
MSH6-208ENST00000493177 SLC10A4Q96EP9 437 aa16.21■□□□□ 0.19
MSH6-208ENST00000493177 PIH1D3Q9NQM4 214 aaKnown RBP16.21■□□□□ 0.19
MSH6-208ENST00000493177 LRP2BPQ9P2M1 347 aa16.21■□□□□ 0.19
MSH6-208ENST00000493177 ZBTB22O15209 634 aa16.2■□□□□ 0.18
MSH6-208ENST00000493177 IDH1O75874 414 aaKnown RBP16.2■□□□□ 0.18
MSH6-208ENST00000493177 DIXDC1Q155Q3 683 aa16.2■□□□□ 0.18
MSH6-208ENST00000493177 SLF2Q8IX21 1173 aa16.2■□□□□ 0.18
MSH6-208ENST00000493177 MRIQ9BWK5 157 aa16.2■□□□□ 0.18
MSH6-208ENST00000493177 TMEM39BQ9GZU3 492 aa16.2■□□□□ 0.18
MSH6-208ENST00000493177 RAI14Q9P0K7 980 aa16.2■□□□□ 0.18
MSH6-208ENST00000493177 SSC5DA1L4H1 1573 aa16.2■□□□□ 0.18
MSH6-208ENST00000493177 SALL1Q9NSC2 1324 aa16.19■□□□□ 0.18
MSH6-208ENST00000493177 TRPA1O75762 1119 aa16.19■□□□□ 0.18
MSH6-208ENST00000493177 SREBF2Q12772 1141 aa16.19■□□□□ 0.18
MSH6-208ENST00000493177 MAP3K12Q12852 859 aa16.19■□□□□ 0.18
MSH6-208ENST00000493177 LRRFIP1Q32MZ4 808 aaKnown RBP16.19■□□□□ 0.18
MSH6-208ENST00000493177 ERICH6Q7L0X2 663 aa16.19■□□□□ 0.18
MSH6-208ENST00000493177 KBTBD3Q8NAB2 608 aa16.19■□□□□ 0.18
MSH6-208ENST00000493177 HOOK2Q96ED9 719 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms