RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 CORO1BQ9BR76 489 aa10.13□□□□□ -0.79
COL12A1-209ENST00000493109 ECM1Q16610 540 aa10.12□□□□□ -0.79
COL12A1-209ENST00000493109 ZNF648Q5T619 568 aaPredicted RBP10.12□□□□□ -0.79
COL12A1-209ENST00000493109 WDR89Q96FK6 387 aaPredicted RBP10.12□□□□□ -0.79
COL12A1-209ENST00000493109 TMPRSS2O15393 492 aa10.11□□□□□ -0.79
COL12A1-209ENST00000493109 ABL1P00519 1130 aa10.11□□□□□ -0.79
COL12A1-209ENST00000493109 PLCL1Q15111 1095 aa10.11□□□□□ -0.79
COL12A1-209ENST00000493109 HP1BP3Q5SSJ5 553 aaPredicted RBP10.11□□□□□ -0.79
COL12A1-209ENST00000493109 CDK5R2Q13319 367 aa10.1□□□□□ -0.79
COL12A1-209ENST00000493109 PLD6Q8N2A8 252 aaKnown RBP10.1□□□□□ -0.79
COL12A1-209ENST00000493109 FAM181AQ8N9Y4 354 aa10.1□□□□□ -0.79
COL12A1-209ENST00000493109 ADAMTS6Q9UKP5 1117 aa10.1□□□□□ -0.79
COL12A1-209ENST00000493109 SYNGAP1Q96PV0 1343 aa10.09□□□□□ -0.79
COL12A1-209ENST00000493109 ABCB6Q9NP58 842 aa10.09□□□□□ -0.79
COL12A1-209ENST00000493109 CD8BP10966 210 aa10.08□□□□□ -0.8
COL12A1-209ENST00000493109 LIG1P18858 919 aa10.08□□□□□ -0.8
COL12A1-209ENST00000493109 CD96P40200 585 aa10.08□□□□□ -0.8
COL12A1-209ENST00000493109 ORC1Q13415 861 aa10.08□□□□□ -0.8
COL12A1-209ENST00000493109 PDE3AQ14432 1141 aa10.08□□□□□ -0.8
COL12A1-209ENST00000493109 NPHS2Q9NP85 383 aa10.08□□□□□ -0.8
COL12A1-209ENST00000493109 CRIM1Q9NZV1 1036 aa10.08□□□□□ -0.8
COL12A1-209ENST00000493109 FAM87AP0C7U9 286 aa10.07□□□□□ -0.8
COL12A1-209ENST00000493109 ZNF124Q15973 351 aa10.07□□□□□ -0.8
COL12A1-209ENST00000493109 STK11IPQ8N1F8 1099 aa10.07□□□□□ -0.8
COL12A1-209ENST00000493109 GLIS3Q8NEA6 775 aa10.07□□□□□ -0.8
COL12A1-209ENST00000493109 CCDC86Q9H6F5 360 aaKnown RBP10.07□□□□□ -0.8
COL12A1-209ENST00000493109 ZFYVE1Q9HBF4 777 aa10.07□□□□□ -0.8
COL12A1-209ENST00000493109 PCDHGC5Q9Y5F6 944 aa10.07□□□□□ -0.8
COL12A1-209ENST00000493109 ZNF862O60290 1169 aa10.06□□□□□ -0.8
COL12A1-209ENST00000493109 RNASE1P07998 156 aaKnown RBP10.06□□□□□ -0.8
COL12A1-209ENST00000493109 FUT4P22083 530 aa10.06□□□□□ -0.8
COL12A1-209ENST00000493109 FAAP100Q0VG06 881 aa10.06□□□□□ -0.8
COL12A1-209ENST00000493109 EHD4Q9H223 541 aa10.06□□□□□ -0.8
COL12A1-209ENST00000493109 MBNL3Q9NUK0 354 aaKnown RBP10.06□□□□□ -0.8
COL12A1-209ENST00000493109 FANCD2OSQ96PS1 177 aa10.05□□□□□ -0.8
COL12A1-209ENST00000493109 AP3B2Q13367 1082 aa10.04□□□□□ -0.8
COL12A1-209ENST00000493109 CYP27C1Q4G0S4 372 aa10.04□□□□□ -0.8
COL12A1-209ENST00000493109 CCDC82Q8N4S0 544 aa10.04□□□□□ -0.8
COL12A1-209ENST00000493109 NETO1Q8TDF5 533 aa10.04□□□□□ -0.8
COL12A1-209ENST00000493109 MISP3Q96FF7 219 aa10.04□□□□□ -0.8
COL12A1-209ENST00000493109 DISC1Q9NRI5 854 aa10.04□□□□□ -0.8
COL12A1-209ENST00000493109 MTMR7Q9Y216 660 aa10.04□□□□□ -0.8
COL12A1-209ENST00000493109 ICMTO60725 284 aa10.03□□□□□ -0.8
COL12A1-209ENST00000493109 LEFTY1O75610 366 aa10.03□□□□□ -0.8
COL12A1-209ENST00000493109 IGHA2P01877 340 aa10.03□□□□□ -0.8
COL12A1-209ENST00000493109 ZNF157P51786 506 aaPredicted RBP10.03□□□□□ -0.8
COL12A1-209ENST00000493109 PTPN12Q05209 780 aaKnown RBP10.03□□□□□ -0.8
COL12A1-209ENST00000493109 ATG4DQ86TL0 474 aaPredicted RBP10.03□□□□□ -0.8
COL12A1-209ENST00000493109 ZC3H12CQ9C0D7 883 aaKnown RBP10.03□□□□□ -0.8
COL12A1-209ENST00000493109 ARHGAP4P98171 946 aa10.02□□□□□ -0.81
COL12A1-209ENST00000493109 PRPF40BQ6NWY9 871 aaKnown RBP10.02□□□□□ -0.81
COL12A1-209ENST00000493109 LRRN4CLQ8ND94 238 aa10.02□□□□□ -0.81
COL12A1-209ENST00000493109 DDX54Q8TDD1 881 aaKnown RBP10.02□□□□□ -0.81
COL12A1-209ENST00000493109 FAM129BQ96TA1 746 aa10.02□□□□□ -0.81
COL12A1-209ENST00000493109 RC3H2Q9HBD1 1191 aaKnown RBP10.02□□□□□ -0.81
COL12A1-209ENST00000493109 SPOCD1Q6ZMY3 1216 aa10.01□□□□□ -0.81
COL12A1-209ENST00000493109 FAM168AQ92567 244 aa10.01□□□□□ -0.81
COL12A1-209ENST00000493109 EGFL7Q9UHF1 273 aa10.01□□□□□ -0.81
COL12A1-209ENST00000493109 PLAGL2Q9UPG8 496 aa10.01□□□□□ -0.81
COL12A1-209ENST00000493109 BIN1O00499 593 aa10□□□□□ -0.81
COL12A1-209ENST00000493109 CPNE3O75131 537 aaKnown RBP10□□□□□ -0.81
COL12A1-209ENST00000493109 PPP1R15AO75807 674 aaPredicted RBP10□□□□□ -0.81
COL12A1-209ENST00000493109 SERPINB4P48594 390 aa10□□□□□ -0.81
COL12A1-209ENST00000493109 ID3Q02535 119 aa10□□□□□ -0.81
COL12A1-209ENST00000493109 KIF4BQ2VIQ3 1234 aa10□□□□□ -0.81
COL12A1-209ENST00000493109 BRPF3Q9ULD4 1205 aa10□□□□□ -0.81
COL12A1-209ENST00000493109 H3BRB1 525 aa9.99□□□□□ -0.81
COL12A1-209ENST00000493109 OXCT1P55809 520 aa9.99□□□□□ -0.81
COL12A1-209ENST00000493109 PRKCQQ04759 706 aa9.99□□□□□ -0.81
COL12A1-209ENST00000493109 TTLL4Q14679 1199 aa9.99□□□□□ -0.81
COL12A1-209ENST00000493109 RPS26P11Q5JNZ5 115 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-209ENST00000493109 SMYD4Q8IYR2 804 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-209ENST00000493109 KRTAP4-2Q9BYR5 136 aa9.99□□□□□ -0.81
COL12A1-209ENST00000493109 ATXN3LQ9H3M9 355 aa9.99□□□□□ -0.81
COL12A1-209ENST00000493109 TUT1Q9H6E5 874 aaKnown RBP9.99□□□□□ -0.81
COL12A1-209ENST00000493109 VAV3Q9UKW4 847 aa9.99□□□□□ -0.81
COL12A1-209ENST00000493109 TMEM238LA0A1B0GVL6 79 aa9.98□□□□□ -0.81
COL12A1-209ENST00000493109 NEFMP07197 916 aa9.98□□□□□ -0.81
COL12A1-209ENST00000493109 PDZD3Q86UT5 571 aa9.98□□□□□ -0.81
COL12A1-209ENST00000493109 CCDC74AQ96AQ1 378 aa9.98□□□□□ -0.81
COL12A1-209ENST00000493109 PIDD1Q9HB75 910 aa9.98□□□□□ -0.81
COL12A1-209ENST00000493109 DBX1A6NMT0 343 aa9.97□□□□□ -0.81
COL12A1-209ENST00000493109 GPR182O15218 404 aa9.97□□□□□ -0.81
COL12A1-209ENST00000493109 HCLS1P14317 486 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-209ENST00000493109 DUSP23Q9BVJ7 150 aa9.97□□□□□ -0.81
COL12A1-209ENST00000493109 C1orf115Q9H7X2 142 aa9.97□□□□□ -0.81
COL12A1-209ENST00000493109 CEACAM5P06731 702 aa9.96□□□□□ -0.82
COL12A1-209ENST00000493109 GSTP1P09211 210 aaKnown RBP9.96□□□□□ -0.82
COL12A1-209ENST00000493109 GRM2Q14416 872 aa9.96□□□□□ -0.82
COL12A1-209ENST00000493109 EIF1AYO14602 144 aaKnown RBP9.95□□□□□ -0.82
COL12A1-209ENST00000493109 FARP2O94887 1054 aaPredicted RBP9.95□□□□□ -0.82
COL12A1-209ENST00000493109 IFI16Q16666 785 aaKnown RBP9.95□□□□□ -0.82
COL12A1-209ENST00000493109 AOC3Q16853 763 aa9.95□□□□□ -0.82
COL12A1-209ENST00000493109 STK35Q8TDR2 534 aa9.95□□□□□ -0.82
COL12A1-209ENST00000493109 MKNK2Q9HBH9 465 aa9.95□□□□□ -0.82
COL12A1-209ENST00000493109 KRT82Q9NSB4 513 aa9.95□□□□□ -0.82
COL12A1-209ENST00000493109 PI4K2BQ8TCG2 481 aa9.94□□□□□ -0.82
COL12A1-209ENST00000493109 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.94□□□□□ -0.82
COL12A1-209ENST00000493109 NEFLP07196 543 aa9.93□□□□□ -0.82
COL12A1-209ENST00000493109 SLFN14P0C7P3 912 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms