RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 CCDC65Q8IXS2 484 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 LMTK3Q96Q04 1460 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 XAGE2Q96GT9 111 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 METTL22Q9BUU2 404 aaPredicted RBP15.34■□□□□ 0.05
TRIM11-204ENST00000493030 NDC80O14777 642 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 RPL13P26373 211 aaKnown RBP15.34■□□□□ 0.05
TRIM11-204ENST00000493030 PIK3AP1Q6ZUJ8 805 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 CCDC24Q8N4L8 307 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 MSANTD4Q8NCY6 345 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.34■□□□□ 0.05
TRIM11-204ENST00000493030 BIN2Q9UBW5 565 aaPredicted RBP15.34■□□□□ 0.05
TRIM11-204ENST00000493030 TRAPPC8Q9Y2L5 1435 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 TAF5LO75529 589 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 CCDC25Q86WR0 208 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 IFT81Q8WYA0 676 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 SELENOSQ9BQE4 189 aa15.34■□□□□ 0.05
TRIM11-204ENST00000493030 YTHDC2Q9H6S0 1430 aaKnown RBP15.34■□□□□ 0.05
TRIM11-204ENST00000493030 PARP10Q53GL7 1025 aa15.33■□□□□ 0.05
TRIM11-204ENST00000493030 GOLGA1Q92805 767 aa15.33■□□□□ 0.05
TRIM11-204ENST00000493030 NSRP1Q9H0G5 558 aaKnown RBP15.33■□□□□ 0.05
TRIM11-204ENST00000493030 FRMD4BQ9Y2L6 1034 aa15.33■□□□□ 0.05
TRIM11-204ENST00000493030 SMC5Q8IY18 1101 aa15.33■□□□□ 0.04
TRIM11-204ENST00000493030 ZFYVE9O95405 1425 aa15.33■□□□□ 0.04
TRIM11-204ENST00000493030 KRT5P13647 590 aa15.33■□□□□ 0.04
TRIM11-204ENST00000493030 KRT222Q8N1A0 295 aa15.33■□□□□ 0.04
TRIM11-204ENST00000493030 OTUD7AQ8TE49 926 aaPredicted RBP15.33■□□□□ 0.04
TRIM11-204ENST00000493030 ZNF408Q9H9D4 720 aa15.33■□□□□ 0.04
TRIM11-204ENST00000493030 PICK1Q9NRD5 415 aa15.33■□□□□ 0.04
TRIM11-204ENST00000493030 TRPM2O94759 1503 aa15.33■□□□□ 0.04
TRIM11-204ENST00000493030 RPS6KB1P23443 525 aa15.33■□□□□ 0.04
TRIM11-204ENST00000493030 GGA1Q9UJY5 639 aa15.33■□□□□ 0.04
TRIM11-204ENST00000493030 CTNND2Q9UQB3 1225 aa15.33■□□□□ 0.04
TRIM11-204ENST00000493030 V9GY48 417 aaPredicted RBP15.33■□□□□ 0.04
TRIM11-204ENST00000493030 SLU7O95391 586 aaKnown RBP15.32■□□□□ 0.04
TRIM11-204ENST00000493030 A1BGP04217 495 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 INTS4Q96HW7 963 aaKnown RBP15.32■□□□□ 0.04
TRIM11-204ENST00000493030 FNBP1Q96RU3 617 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 TESK2Q96S53 571 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 GTPBP4Q9BZE4 634 aaKnown RBP15.32■□□□□ 0.04
TRIM11-204ENST00000493030 CCDC169A6NNP5 214 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 OPA1O60313 960 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 PDE8AO60658 829 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 RAB3IL1Q8TBN0 382 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 WDR70Q9NW82 654 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 AATFQ9NY61 560 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRIM11-204ENST00000493030 ZBTB7BO15156 539 aaPredicted RBP15.32■□□□□ 0.04
TRIM11-204ENST00000493030 CCNT1O60563 726 aaKnown RBP15.32■□□□□ 0.04
TRIM11-204ENST00000493030 NAP1L4Q99733 375 aaKnown RBP15.32■□□□□ 0.04
TRIM11-204ENST00000493030 NCOA5Q9HCD5 579 aaKnown RBP15.32■□□□□ 0.04
TRIM11-204ENST00000493030 RHOXF2BP0C7M4 288 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 PPP1R7Q15435 360 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 CCDC6Q16204 474 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 APBB1IPQ7Z5R6 666 aaPredicted RBP15.32■□□□□ 0.04
TRIM11-204ENST00000493030 CCDC114Q96M63 670 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 RHOXF2Q9BQY4 288 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 ELP1O95163 1332 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 TLDC2A0PJX2 215 aa15.32■□□□□ 0.04
TRIM11-204ENST00000493030 DEXIO95424 95 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 HSPA4P34932 840 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 PDE4DQ08499 809 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 SYT10Q6XYQ8 523 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 LGR6Q9HBX8 967 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 TXNDC16Q9P2K2 825 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 MAPK8IP1Q9UQF2 711 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 SLC27A2O14975 620 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 GPAA1O43292 621 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 EPB41P11171 864 aaKnown RBP15.31■□□□□ 0.04
TRIM11-204ENST00000493030 PLCD1P51178 756 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 MYL5Q02045 173 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 ZBTB16Q05516 673 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 RILPL1Q5EBL4 403 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 ORAI2Q96SN7 254 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 NOC4LQ9BVI4 516 aaKnown RBP15.31■□□□□ 0.04
TRIM11-204ENST00000493030 STMN4Q9H169 189 aaPredicted RBP15.31■□□□□ 0.04
TRIM11-204ENST00000493030 STK32BQ9NY57 414 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 TMOD4Q9NZQ9 345 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 ZKSCAN5Q9Y2L8 839 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 SEC24BO95487 1268 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 TXKP42681 527 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 TMEM87BQ96K49 555 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 SRRTQ9BXP5 876 aaKnown RBP15.31■□□□□ 0.04
TRIM11-204ENST00000493030 ARHGEF10LQ9HCE6 1279 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 RSPH14Q9UHP6 348 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 GINS2Q9Y248 185 aa15.31■□□□□ 0.04
TRIM11-204ENST00000493030 IPO4Q8TEX9 1081 aaKnown RBP15.3■□□□□ 0.04
TRIM11-204ENST00000493030 TCOF1Q13428 1488 aaKnown RBP15.3■□□□□ 0.04
TRIM11-204ENST00000493030 NDUFB9Q9Y6M9 179 aa15.3■□□□□ 0.04
TRIM11-204ENST00000493030 WDR44Q5JSH3 913 aa15.3■□□□□ 0.04
TRIM11-204ENST00000493030 LEO1Q8WVC0 666 aaPredicted RBP15.3■□□□□ 0.04
TRIM11-204ENST00000493030 FAM227BQ96M60 508 aa15.3■□□□□ 0.04
TRIM11-204ENST00000493030 CCDC122Q5T0U0 273 aa15.3■□□□□ 0.04
TRIM11-204ENST00000493030 ZMYM3Q14202 1370 aa15.3■□□□□ 0.04
TRIM11-204ENST00000493030 FAM160A1Q05DH4 1040 aa15.3■□□□□ 0.04
TRIM11-204ENST00000493030 DNAJC21Q5F1R6 531 aaKnown RBP15.3■□□□□ 0.04
TRIM11-204ENST00000493030 CNGA4Q8IV77 575 aa15.3■□□□□ 0.04
TRIM11-204ENST00000493030 APPBP2Q92624 585 aa15.3■□□□□ 0.04
TRIM11-204ENST00000493030 MYCLP12524 364 aaPredicted RBP15.29■□□□□ 0.04
TRIM11-204ENST00000493030 PRKG1Q13976 671 aa15.29■□□□□ 0.04
TRIM11-204ENST00000493030 UIMC1Q96RL1 719 aa15.29■□□□□ 0.04
TRIM11-204ENST00000493030 MAK16Q9BXY0 300 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms