RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 SOX18P35713 384 aa9.51□□□□□ -0.89
TPR-208ENST00000492973 NRLP54845 237 aa9.51□□□□□ -0.89
TPR-208ENST00000492973 MARSP56192 900 aaKnown RBP9.51□□□□□ -0.89
TPR-208ENST00000492973 GPLD1P80108 840 aa9.51□□□□□ -0.89
TPR-208ENST00000492973 TBC1D8BQ0IIM8 1120 aa9.51□□□□□ -0.89
TPR-208ENST00000492973 KANK3Q6NY19 840 aa9.51□□□□□ -0.89
TPR-208ENST00000492973 GJD3Q8N144 294 aa9.51□□□□□ -0.89
TPR-208ENST00000492973 NAGPAQ9UK23 515 aa9.51□□□□□ -0.89
TPR-208ENST00000492973 EVC2Q86UK5 1308 aa9.51□□□□□ -0.89
TPR-208ENST00000492973 USP5P45974 858 aa9.5□□□□□ -0.89
TPR-208ENST00000492973 PCSK7Q16549 785 aa9.5□□□□□ -0.89
TPR-208ENST00000492973 ELP3Q9H9T3 547 aa9.5□□□□□ -0.89
TPR-208ENST00000492973 DISP3Q9P2K9 1392 aa9.5□□□□□ -0.89
TPR-208ENST00000492973 ATP7BP35670 1465 aa9.49□□□□□ -0.89
TPR-208ENST00000492973 A6NHS1 94 aa9.49□□□□□ -0.89
TPR-208ENST00000492973 PATL2C9JE40 543 aaKnown RBP9.49□□□□□ -0.89
TPR-208ENST00000492973 PSAPP07602 524 aa9.49□□□□□ -0.89
TPR-208ENST00000492973 LINC00114Q6XXX2 140 aa9.49□□□□□ -0.89
TPR-208ENST00000492973 C20orf204Q6ZNR8 217 aa9.49□□□□□ -0.89
TPR-208ENST00000492973 ZNF438Q7Z4V0 828 aa9.49□□□□□ -0.89
TPR-208ENST00000492973 OR13H1Q8NG92 308 aa9.49□□□□□ -0.89
TPR-208ENST00000492973 DDX17Q92841 729 aaKnown RBP9.49□□□□□ -0.89
TPR-208ENST00000492973 RRAGCQ9HB90 399 aa9.49□□□□□ -0.89
TPR-208ENST00000492973 ABI2Q9NYB9 513 aaPredicted RBP9.49□□□□□ -0.89
TPR-208ENST00000492973 TMEM63CQ9P1W3 806 aa9.49□□□□□ -0.89
TPR-208ENST00000492973 QRICH2Q9H0J4 1663 aa9.48□□□□□ -0.89
TPR-208ENST00000492973 FMN2Q9NZ56 1722 aa9.48□□□□□ -0.89
TPR-208ENST00000492973 ALBP02768 609 aa9.48□□□□□ -0.89
TPR-208ENST00000492973 HSPA1LP34931 641 aa9.48□□□□□ -0.89
TPR-208ENST00000492973 TMF1P82094 1093 aa9.48□□□□□ -0.89
TPR-208ENST00000492973 PLAURQ03405 335 aa9.48□□□□□ -0.89
TPR-208ENST00000492973 C8orf34Q49A92 452 aa9.48□□□□□ -0.89
TPR-208ENST00000492973 PMFBP1Q8TBY8 1022 aa9.48□□□□□ -0.89
TPR-208ENST00000492973 SCARF2Q96GP6 870 aaPredicted RBP9.48□□□□□ -0.89
TPR-208ENST00000492973 PUS7Q96PZ0 661 aaKnown RBP9.48□□□□□ -0.89
TPR-208ENST00000492973 CNTNAP5Q8WYK1 1306 aa9.48□□□□□ -0.89
TPR-208ENST00000492973 USP32Q8NFA0 1604 aa9.47□□□□□ -0.89
TPR-208ENST00000492973 MLLT1Q03111 559 aaPredicted RBP9.47□□□□□ -0.89
TPR-208ENST00000492973 MICALL1Q8N3F8 863 aa9.47□□□□□ -0.89
TPR-208ENST00000492973 BEND7Q8N7W2 519 aaPredicted RBP9.47□□□□□ -0.89
TPR-208ENST00000492973 PRDM6Q9NQX0 595 aa9.47□□□□□ -0.89
TPR-208ENST00000492973 BRPF3Q9ULD4 1205 aa9.47□□□□□ -0.89
TPR-208ENST00000492973 M0R082 166 aa9.46□□□□□ -0.9
TPR-208ENST00000492973 EHHADHQ08426 723 aa9.46□□□□□ -0.9
TPR-208ENST00000492973 TTC39BQ5VTQ0 682 aaPredicted RBP9.46□□□□□ -0.9
TPR-208ENST00000492973 PODNQ7Z5L7 613 aa9.46□□□□□ -0.9
TPR-208ENST00000492973 FAM35AQ86V20 835 aa9.46□□□□□ -0.9
TPR-208ENST00000492973 KCTD17Q8N5Z5 321 aa9.46□□□□□ -0.9
TPR-208ENST00000492973 TTC16Q8NEE8 873 aa9.46□□□□□ -0.9
TPR-208ENST00000492973 ZNF417Q8TAU3 575 aa9.46□□□□□ -0.9
TPR-208ENST00000492973 ZNF587Q96SQ5 575 aaPredicted RBP9.46□□□□□ -0.9
TPR-208ENST00000492973 CNTN3Q9P232 1028 aa9.46□□□□□ -0.9
TPR-208ENST00000492973 MKL2Q9ULH7 1088 aa9.46□□□□□ -0.9
TPR-208ENST00000492973 ROBO1Q9Y6N7 1651 aa9.45□□□□□ -0.9
TPR-208ENST00000492973 NDUFB5O43674 189 aa9.45□□□□□ -0.9
TPR-208ENST00000492973 CYP2E1P05181 493 aaPredicted RBP9.45□□□□□ -0.9
TPR-208ENST00000492973 CPB1P15086 417 aa9.45□□□□□ -0.9
TPR-208ENST00000492973 XPCQ01831 940 aaPredicted RBP9.45□□□□□ -0.9
TPR-208ENST00000492973 COL9A3Q14050 684 aaPredicted RBP9.45□□□□□ -0.9
TPR-208ENST00000492973 PSAPL1Q6NUJ1 521 aa9.45□□□□□ -0.9
TPR-208ENST00000492973 NSUN5Q96P11 429 aaKnown RBP9.45□□□□□ -0.9
TPR-208ENST00000492973 SLC12A5Q9H2X9 1139 aa9.45□□□□□ -0.9
TPR-208ENST00000492973 ACEP12821 1306 aa9.45□□□□□ -0.9
TPR-208ENST00000492973 NPHP3Q7Z494 1330 aa9.45□□□□□ -0.9
TPR-208ENST00000492973 PPIP5K1Q6PFW1 1433 aa9.45□□□□□ -0.9
TPR-208ENST00000492973 LOC102724428A0A0B4J2F2 783 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 RNF225M0QZC1 329 aaPredicted RBP9.44□□□□□ -0.9
TPR-208ENST00000492973 GSK3AP49840 483 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 SIK1P57059 783 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 PERM1Q5SV97 790 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 COL13A1Q5TAT6 717 aaPredicted RBP9.44□□□□□ -0.9
TPR-208ENST00000492973 C8orf86Q6ZUL3 223 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 HFE2Q6ZVN8 426 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 KRT28Q7Z3Y7 464 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 AEBP1Q8IUX7 1158 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 NGDNQ8NEJ9 315 aaKnown RBP9.44□□□□□ -0.9
TPR-208ENST00000492973 CITED4Q96RK1 184 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 FAM129BQ96TA1 746 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 LPIN3Q9BQK8 851 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 CHRDQ9H2X0 955 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 FRRS1LQ9P0K9 344 aa9.44□□□□□ -0.9
TPR-208ENST00000492973 POLR3AO14802 1390 aaPredicted RBP9.44□□□□□ -0.9
TPR-208ENST00000492973 AHDC1Q5TGY3 1603 aaPredicted RBP9.44□□□□□ -0.9
TPR-208ENST00000492973 PXDNQ92626 1479 aa9.43□□□□□ -0.9
TPR-208ENST00000492973 PHF20L1A8MW92 1017 aa9.43□□□□□ -0.9
TPR-208ENST00000492973 GNB5O14775 395 aa9.43□□□□□ -0.9
TPR-208ENST00000492973 TNFRSF21O75509 655 aa9.43□□□□□ -0.9
TPR-208ENST00000492973 KIF4AO95239 1232 aa9.43□□□□□ -0.9
TPR-208ENST00000492973 IGHA2P01877 340 aa9.43□□□□□ -0.9
TPR-208ENST00000492973 KCNMA1Q12791 1236 aa9.43□□□□□ -0.9
TPR-208ENST00000492973 C1orf127Q8N9H9 656 aa9.43□□□□□ -0.9
TPR-208ENST00000492973 TMC1Q8TDI8 760 aa9.43□□□□□ -0.9
TPR-208ENST00000492973 BIN2Q9UBW5 565 aaPredicted RBP9.43□□□□□ -0.9
TPR-208ENST00000492973 KIF7Q2M1P5 1343 aa9.42□□□□□ -0.9
TPR-208ENST00000492973 J3QW42 95 aa9.42□□□□□ -0.9
TPR-208ENST00000492973 HYAL2Q12891 473 aa9.42□□□□□ -0.9
TPR-208ENST00000492973 SNX29Q8TEQ0 813 aa9.42□□□□□ -0.9
TPR-208ENST00000492973 NUDT8Q8WV74 236 aa9.42□□□□□ -0.9
TPR-208ENST00000492973 TTC9Q92623 222 aa9.42□□□□□ -0.9
TPR-208ENST00000492973 TRIM11Q96F44 468 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms