RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 LRRC24Q50LG9 513 aa13.83□□□□□ -0.2
SND1-215ENST00000492772 C17orf99Q6UX52 265 aa13.83□□□□□ -0.2
SND1-215ENST00000492772 NKX2-3Q8TAU0 364 aa13.83□□□□□ -0.2
SND1-215ENST00000492772 SRRDQ9UH36 339 aa13.83□□□□□ -0.2
SND1-215ENST00000492772 DOCK2Q92608 1830 aa13.83□□□□□ -0.2
SND1-215ENST00000492772 IFIT1P09914 478 aaKnown RBP13.82□□□□□ -0.2
SND1-215ENST00000492772 BCAMP50895 628 aa13.82□□□□□ -0.2
SND1-215ENST00000492772 PUM3Q15397 648 aaKnown RBP13.82□□□□□ -0.2
SND1-215ENST00000492772 ANKRD44Q8N8A2 993 aa13.82□□□□□ -0.2
SND1-215ENST00000492772 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.82□□□□□ -0.2
SND1-215ENST00000492772 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
SND1-215ENST00000492772 KCNH4Q9UQ05 1017 aa13.82□□□□□ -0.2
SND1-215ENST00000492772 ADGRA2Q96PE1 1338 aa13.82□□□□□ -0.2
SND1-215ENST00000492772 AK9Q5TCS8 1911 aa13.82□□□□□ -0.2
SND1-215ENST00000492772 MGAMO43451 1857 aa13.81□□□□□ -0.2
SND1-215ENST00000492772 PDHXO00330 501 aa13.81□□□□□ -0.2
SND1-215ENST00000492772 PSMC4P43686 418 aa13.81□□□□□ -0.2
SND1-215ENST00000492772 WDR66Q8TBY9 1149 aa13.81□□□□□ -0.2
SND1-215ENST00000492772 RAET1EQ8TD07 263 aa13.81□□□□□ -0.2
SND1-215ENST00000492772 FAM151AQ8WW52 585 aa13.81□□□□□ -0.2
SND1-215ENST00000492772 SHISA4Q96DD7 197 aa13.81□□□□□ -0.2
SND1-215ENST00000492772 TRIM47Q96LD4 638 aa13.81□□□□□ -0.2
SND1-215ENST00000492772 CPA4Q9UI42 421 aa13.81□□□□□ -0.2
SND1-215ENST00000492772 TRIOBPQ9H2D6 2365 aa13.81□□□□□ -0.2
SND1-215ENST00000492772 FGFR2P21802 821 aa13.8□□□□□ -0.2
SND1-215ENST00000492772 OSBPP22059 807 aa13.8□□□□□ -0.2
SND1-215ENST00000492772 INPP5BP32019 993 aa13.8□□□□□ -0.2
SND1-215ENST00000492772 GRK4P32298 578 aa13.8□□□□□ -0.2
SND1-215ENST00000492772 NOL9Q5SY16 702 aaKnown RBP13.8□□□□□ -0.2
SND1-215ENST00000492772 MIGA2Q7L4E1 593 aa13.8□□□□□ -0.2
SND1-215ENST00000492772 PARK7Q99497 189 aaKnown RBP13.8□□□□□ -0.2
SND1-215ENST00000492772 ZNF112Q9UJU3 913 aa13.8□□□□□ -0.2
SND1-215ENST00000492772 MYPNQ86TC9 1320 aa13.8□□□□□ -0.2
SND1-215ENST00000492772 FMNL1O95466 1100 aaPredicted RBP13.79□□□□□ -0.2
SND1-215ENST00000492772 SLC5A1P13866 664 aa13.79□□□□□ -0.2
SND1-215ENST00000492772 CTGFP29279 349 aa13.79□□□□□ -0.2
SND1-215ENST00000492772 ZEB1P37275 1124 aaPredicted RBP13.79□□□□□ -0.2
SND1-215ENST00000492772 MTFR1Q15390 333 aa13.79□□□□□ -0.2
SND1-215ENST00000492772 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
SND1-215ENST00000492772 HTATIP2Q9BUP3 242 aa13.79□□□□□ -0.2
SND1-215ENST00000492772 PTPRCP08575 1304 aa13.79□□□□□ -0.2
SND1-215ENST00000492772 GJB1P08034 283 aa13.78□□□□□ -0.2
SND1-215ENST00000492772 GJA8P48165 433 aa13.78□□□□□ -0.2
SND1-215ENST00000492772 UBXN2AP68543 259 aa13.78□□□□□ -0.2
SND1-215ENST00000492772 KLHDC4Q8TBB5 520 aa13.78□□□□□ -0.2
SND1-215ENST00000492772 LPIN2Q92539 896 aa13.78□□□□□ -0.2
SND1-215ENST00000492772 DPF3Q92784 378 aa13.78□□□□□ -0.2
SND1-215ENST00000492772 DAGLAQ9Y4D2 1042 aa13.78□□□□□ -0.2
SND1-215ENST00000492772 EYA2O00167 538 aa13.77□□□□□ -0.21
SND1-215ENST00000492772 CXCL11O14625 94 aa13.77□□□□□ -0.21
SND1-215ENST00000492772 ECM2O94769 699 aaPredicted RBP13.77□□□□□ -0.21
SND1-215ENST00000492772 CCL5P13501 91 aa13.77□□□□□ -0.21
SND1-215ENST00000492772 FCGRTP55899 365 aa13.77□□□□□ -0.21
SND1-215ENST00000492772 TCP10Q12799 353 aa13.77□□□□□ -0.21
SND1-215ENST00000492772 MOGSQ13724 837 aa13.77□□□□□ -0.21
SND1-215ENST00000492772 DOCK1Q14185 1865 aa13.77□□□□□ -0.21
SND1-215ENST00000492772 CDC42EP5Q6NZY7 148 aa13.77□□□□□ -0.21
SND1-215ENST00000492772 SLAIN1Q8ND83 568 aa13.77□□□□□ -0.21
SND1-215ENST00000492772 PTPRFP10586 1907 aa13.76□□□□□ -0.21
SND1-215ENST00000492772 ANP32CO43423 234 aa13.76□□□□□ -0.21
SND1-215ENST00000492772 BCRP11274 1271 aa13.76□□□□□ -0.21
SND1-215ENST00000492772 PRKCZQ05513 592 aa13.76□□□□□ -0.21
SND1-215ENST00000492772 DIXDC1Q155Q3 683 aa13.76□□□□□ -0.21
SND1-215ENST00000492772 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
SND1-215ENST00000492772 MRPL50Q8N5N7 158 aaKnown RBP13.76□□□□□ -0.21
SND1-215ENST00000492772 RNF208Q9H0X6 261 aa13.76□□□□□ -0.21
SND1-215ENST00000492772 BIN2Q9UBW5 565 aaPredicted RBP13.76□□□□□ -0.21
SND1-215ENST00000492772 ATRNL1Q5VV63 1379 aa13.75□□□□□ -0.21
SND1-215ENST00000492772 SALL1Q9NSC2 1324 aa13.75□□□□□ -0.21
SND1-215ENST00000492772 MYH2Q9UKX2 1941 aa13.75□□□□□ -0.21
SND1-215ENST00000492772 LDHBP07195 334 aaKnown RBP13.75□□□□□ -0.21
SND1-215ENST00000492772 CAPN2P17655 700 aa13.75□□□□□ -0.21
SND1-215ENST00000492772 PRDX5P30044 214 aa13.75□□□□□ -0.21
SND1-215ENST00000492772 NFIAQ12857 509 aa13.75□□□□□ -0.21
SND1-215ENST00000492772 FASTKD5Q7L8L6 764 aaKnown RBP13.75□□□□□ -0.21
SND1-215ENST00000492772 GNL3LQ9NVN8 582 aaKnown RBP13.75□□□□□ -0.21
SND1-215ENST00000492772 RBM27Q9P2N5 1060 aaKnown RBP13.75□□□□□ -0.21
SND1-215ENST00000492772 FAM198AQ9UFP1 575 aa13.75□□□□□ -0.21
SND1-215ENST00000492772 NR2E3Q9Y5X4 410 aa13.75□□□□□ -0.21
SND1-215ENST00000492772 RANBP2P49792 3224 aaKnown RBP13.75□□□□□ -0.21
SND1-215ENST00000492772 SZT2Q5T011 3432 aa13.74□□□□□ -0.21
SND1-215ENST00000492772 A0A0G2JLL6 359 aaPredicted RBP13.74□□□□□ -0.21
SND1-215ENST00000492772 SEMA3EO15041 775 aa13.74□□□□□ -0.21
SND1-215ENST00000492772 FARP2O94887 1054 aaPredicted RBP13.74□□□□□ -0.21
SND1-215ENST00000492772 CYP2C8P10632 490 aa13.74□□□□□ -0.21
SND1-215ENST00000492772 RFX5P48382 616 aaPredicted RBP13.74□□□□□ -0.21
SND1-215ENST00000492772 GPAT2Q6NUI2 795 aa13.74□□□□□ -0.21
SND1-215ENST00000492772 PRRT2Q7Z6L0 340 aaPredicted RBP13.74□□□□□ -0.21
SND1-215ENST00000492772 SCYL3Q8IZE3 742 aa13.74□□□□□ -0.21
SND1-215ENST00000492772 U2AF1L4Q8WU68 220 aaKnown RBP13.74□□□□□ -0.21
SND1-215ENST00000492772 USP44Q9H0E7 712 aa13.74□□□□□ -0.21
SND1-215ENST00000492772 PICK1Q9NRD5 415 aa13.74□□□□□ -0.21
SND1-215ENST00000492772 USP40Q9NVE5 1235 aa13.74□□□□□ -0.21
SND1-215ENST00000492772 FBXO3Q9UK99 471 aa13.74□□□□□ -0.21
SND1-215ENST00000492772 SLC45A1Q9Y2W3 748 aa13.74□□□□□ -0.21
SND1-215ENST00000492772 PHIPQ8WWQ0 1821 aa13.74□□□□□ -0.21
SND1-215ENST00000492772 RFX7Q2KHR2 1363 aa13.73□□□□□ -0.21
SND1-215ENST00000492772 ZNF521Q96K83 1311 aa13.73□□□□□ -0.21
SND1-215ENST00000492772 ENTPD3O75355 529 aa13.73□□□□□ -0.21
SND1-215ENST00000492772 ATP2B3Q16720 1220 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms