RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 MPHOSPH8Q99549 860 aa12.65□□□□□ -0.39
CSMD3-206ENST00000492692 PHACTR1Q9C0D0 580 aa12.65□□□□□ -0.39
CSMD3-206ENST00000492692 PAPOLBQ9NRJ5 636 aaKnown RBP12.65□□□□□ -0.39
CSMD3-206ENST00000492692 TRPC6Q9Y210 931 aa12.65□□□□□ -0.39
CSMD3-206ENST00000492692 GMEB1Q9Y692 573 aa12.65□□□□□ -0.39
CSMD3-206ENST00000492692 CDC42BPGQ6DT37 1551 aa12.64□□□□□ -0.39
CSMD3-206ENST00000492692 ACTN3Q08043 901 aaPredicted RBP12.64□□□□□ -0.39
CSMD3-206ENST00000492692 DYNC1I2Q13409 638 aaKnown RBP12.64□□□□□ -0.39
CSMD3-206ENST00000492692 MAP3K11Q16584 847 aa12.64□□□□□ -0.39
CSMD3-206ENST00000492692 CCDC40Q4G0X9 1142 aa12.64□□□□□ -0.39
CSMD3-206ENST00000492692 E4F1Q66K89 784 aaPredicted RBP12.64□□□□□ -0.39
CSMD3-206ENST00000492692 RBM43Q6ZSC3 357 aaKnown RBP12.64□□□□□ -0.39
CSMD3-206ENST00000492692 STAG2Q8N3U4 1231 aa12.64□□□□□ -0.39
CSMD3-206ENST00000492692 MSANTD4Q8NCY6 345 aa12.64□□□□□ -0.39
CSMD3-206ENST00000492692 DHRS1Q96LJ7 313 aa12.64□□□□□ -0.39
CSMD3-206ENST00000492692 TRMT1Q9NXH9 659 aaKnown RBP12.64□□□□□ -0.39
CSMD3-206ENST00000492692 MRFAP1Q9Y605 127 aa12.64□□□□□ -0.39
CSMD3-206ENST00000492692 ZFYVE16Q7Z3T8 1539 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 SLC27A2O14975 620 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 PRPF6O94906 941 aaKnown RBP12.63□□□□□ -0.39
CSMD3-206ENST00000492692 ATP5JP18859 108 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 FLT3P36888 993 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 PSME1Q06323 249 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 KIAA0753Q2KHM9 967 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 EFCAB2Q5VUJ9 269 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 BZW1Q7L1Q6 419 aaKnown RBP12.63□□□□□ -0.39
CSMD3-206ENST00000492692 PARP9Q8IXQ6 854 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 LZICQ8WZA0 190 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 SLC35B4Q969S0 331 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 ACSBG1Q96GR2 724 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 ACTR5Q9H9F9 607 aaPredicted RBP12.63□□□□□ -0.39
CSMD3-206ENST00000492692 PARP3Q9Y6F1 533 aa12.63□□□□□ -0.39
CSMD3-206ENST00000492692 A6NHS1 94 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 MGRN1O60291 552 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 PENKP01210 267 aaPredicted RBP12.62□□□□□ -0.39
CSMD3-206ENST00000492692 MAGEA10P43363 369 aaPredicted RBP12.62□□□□□ -0.39
CSMD3-206ENST00000492692 ATP2B2Q01814 1243 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
CSMD3-206ENST00000492692 MYBPC3Q14896 1274 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 Q4G0T1 1027 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 TTC22Q5TAA0 569 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 ARMC9Q7Z3E5 817 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 SPAG5Q96R06 1193 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 NACA2Q9H009 215 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 ITGB1BP2Q9UKP3 347 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 PHF24Q9UPV7 400 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 ATP6V1DQ9Y5K8 247 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 ASXL2Q76L83 1435 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 ABCC4O15439 1325 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 ADGRF5Q8IZF2 1346 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 FRMD3A2A2Y4 597 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 TESPA1A2RU30 521 aaPredicted RBP12.62□□□□□ -0.39
CSMD3-206ENST00000492692 TMEM221A6NGB7 291 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 KIF3BO15066 747 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 CREB3O43889 395 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 FOXD4Q12950 439 aaPredicted RBP12.62□□□□□ -0.39
CSMD3-206ENST00000492692 NUGGCQ68CJ6 796 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 LUZP1Q86V48 1076 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 TRAIPQ9BWF2 469 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 EBF2Q9HAK2 575 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 ADGRB3O60242 1522 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 PPLO60437 1756 aa12.62□□□□□ -0.39
CSMD3-206ENST00000492692 MROH2AA6NES4 1674 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 ADGRB1O14514 1584 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 CDHR2Q9BYE9 1310 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 ABLIM1O14639 778 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 ZSCAN12O43309 604 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 STIP1P31948 543 aaKnown RBP12.61□□□□□ -0.39
CSMD3-206ENST00000492692 CLPPQ16740 277 aaPredicted RBP12.61□□□□□ -0.39
CSMD3-206ENST00000492692 CCDC92Q53HC0 331 aaPredicted RBP12.61□□□□□ -0.39
CSMD3-206ENST00000492692 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
CSMD3-206ENST00000492692 SYNE3Q6ZMZ3 975 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 PLEKHM2Q8IWE5 1019 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 ERMNQ8TAM6 284 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 TSC22D3Q99576 134 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 SLC12A5Q9H2X9 1139 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 PLEKHA4Q9H4M7 779 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 ZWILCHQ9H900 591 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 SLC40A1Q9NP59 571 aa12.61□□□□□ -0.39
CSMD3-206ENST00000492692 GOLGA6L7A0A1B0GV03 622 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 B4DLN1 442 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 KRT38O76015 456 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 VIL1P09327 827 aaKnown RBP12.6□□□□□ -0.39
CSMD3-206ENST00000492692 AMPHP49418 695 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 IRAK1P51617 712 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 PPP2R3AQ06190 1150 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 GORABQ5T7V8 394 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 FCHSD1Q86WN1 690 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 RNF168Q8IYW5 571 aaPredicted RBP12.6□□□□□ -0.39
CSMD3-206ENST00000492692 LEO1Q8WVC0 666 aaPredicted RBP12.6□□□□□ -0.39
CSMD3-206ENST00000492692 MPHOSPH6Q99547 160 aaKnown RBP12.6□□□□□ -0.39
CSMD3-206ENST00000492692 PICK1Q9NRD5 415 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 LMTK2Q8IWU2 1503 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 ABCA9Q8IUA7 1624 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 EIF3HO15372 352 aaKnown RBP eCLIP12.6□□□□□ -0.39
CSMD3-206ENST00000492692 CYP27B1O15528 508 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 TIMM44O43615 452 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 N4BP1O75113 896 aaKnown RBP12.6□□□□□ -0.39
CSMD3-206ENST00000492692 CCDC175P0C221 793 aa12.6□□□□□ -0.39
CSMD3-206ENST00000492692 GSPT1P15170 499 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms