RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 SURF6O75683 361 aaKnown RBP18.49■□□□□ 0.55
TOM1-215ENST00000491987 GJA5P36382 358 aa18.49■□□□□ 0.55
TOM1-215ENST00000491987 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.49■□□□□ 0.55
TOM1-215ENST00000491987 USP40Q9NVE5 1235 aa18.49■□□□□ 0.55
TOM1-215ENST00000491987 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
TOM1-215ENST00000491987 RPAP1Q9BWH6 1393 aaPredicted RBP18.49■□□□□ 0.55
TOM1-215ENST00000491987 MAP3K9P80192 1104 aa18.48■□□□□ 0.55
TOM1-215ENST00000491987 TCP10Q12799 353 aa18.48■□□□□ 0.55
TOM1-215ENST00000491987 NFIAQ12857 509 aa18.48■□□□□ 0.55
TOM1-215ENST00000491987 VGLL4Q14135 290 aa18.48■□□□□ 0.55
TOM1-215ENST00000491987 TNNI3KQ59H18 835 aa18.48■□□□□ 0.55
TOM1-215ENST00000491987 SPTY2D1Q68D10 685 aaPredicted RBP18.48■□□□□ 0.55
TOM1-215ENST00000491987 PI16Q6UXB8 463 aa18.48■□□□□ 0.55
TOM1-215ENST00000491987 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.48■□□□□ 0.55
TOM1-215ENST00000491987 FAM151AQ8WW52 585 aa18.48■□□□□ 0.55
TOM1-215ENST00000491987 OPTNQ96CV9 577 aa18.48■□□□□ 0.55
TOM1-215ENST00000491987 FPGT-TNNI3KV9GXZ4 949 aa18.48■□□□□ 0.55
TOM1-215ENST00000491987 GAKO14976 1311 aa18.48■□□□□ 0.55
TOM1-215ENST00000491987 MS4A1P11836 297 aa18.47■□□□□ 0.55
TOM1-215ENST00000491987 ARID4AP29374 1257 aaPredicted RBP18.47■□□□□ 0.55
TOM1-215ENST00000491987 INHBEP58166 350 aa18.47■□□□□ 0.55
TOM1-215ENST00000491987 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
TOM1-215ENST00000491987 SPATA5Q8NB90 893 aa18.47■□□□□ 0.55
TOM1-215ENST00000491987 CNKSR2Q8WXI2 1034 aa18.47■□□□□ 0.55
TOM1-215ENST00000491987 HOOK2Q96ED9 719 aa18.47■□□□□ 0.55
TOM1-215ENST00000491987 GPR108Q9NPR9 543 aa18.47■□□□□ 0.55
TOM1-215ENST00000491987 CSADQ9Y600 493 aa18.47■□□□□ 0.55
TOM1-215ENST00000491987 LAMB1P07942 1786 aa18.47■□□□□ 0.55
TOM1-215ENST00000491987 IGF2BP3O00425 579 aaKnown RBP eCLIP18.46■□□□□ 0.55
TOM1-215ENST00000491987 ERICH6Q7L0X2 663 aa18.46■□□□□ 0.55
TOM1-215ENST00000491987 IFNL1Q8IU54 200 aa18.46■□□□□ 0.55
TOM1-215ENST00000491987 WRNIP1Q96S55 665 aa18.46■□□□□ 0.55
TOM1-215ENST00000491987 DBNDD2Q9BQY9 259 aa18.46■□□□□ 0.55
TOM1-215ENST00000491987 FAM198AQ9UFP1 575 aa18.46■□□□□ 0.55
TOM1-215ENST00000491987 RCAN3Q9UKA8 241 aa18.46■□□□□ 0.55
TOM1-215ENST00000491987 NOP58Q9Y2X3 529 aaKnown RBP18.46■□□□□ 0.55
TOM1-215ENST00000491987 MYH2Q9UKX2 1941 aa18.45■□□□□ 0.54
TOM1-215ENST00000491987 UQCRFS1P1P0C7P4 283 aa18.45■□□□□ 0.54
TOM1-215ENST00000491987 MCAMP43121 646 aa18.45■□□□□ 0.54
TOM1-215ENST00000491987 MECOMQ03112 1051 aa18.45■□□□□ 0.54
TOM1-215ENST00000491987 DCAF15Q66K64 600 aa18.45■□□□□ 0.54
TOM1-215ENST00000491987 TBC1D9Q6ZT07 1266 aa18.45■□□□□ 0.54
TOM1-215ENST00000491987 MIGA2Q7L4E1 593 aa18.45■□□□□ 0.54
TOM1-215ENST00000491987 SLF2Q8IX21 1173 aa18.45■□□□□ 0.54
TOM1-215ENST00000491987 ZNF296Q8WUU4 475 aaPredicted RBP18.45■□□□□ 0.54
TOM1-215ENST00000491987 R3HDMLQ9H3Y0 253 aa18.45■□□□□ 0.54
TOM1-215ENST00000491987 MROH7-TTC4A0A0A0MT08 1334 aa18.45■□□□□ 0.54
TOM1-215ENST00000491987 CCDC85CA6NKD9 419 aa18.44■□□□□ 0.54
TOM1-215ENST00000491987 GPR25O00155 361 aa18.44■□□□□ 0.54
TOM1-215ENST00000491987 ALDH1A1P00352 501 aa18.44■□□□□ 0.54
TOM1-215ENST00000491987 BTDP43251 543 aa18.44■□□□□ 0.54
TOM1-215ENST00000491987 TTC39AQ5SRH9 613 aa18.44■□□□□ 0.54
TOM1-215ENST00000491987 ZNF384Q8TF68 577 aa18.44■□□□□ 0.54
TOM1-215ENST00000491987 OTUD5Q96G74 571 aa18.44■□□□□ 0.54
TOM1-215ENST00000491987 CFHR5Q9BXR6 569 aa18.44■□□□□ 0.54
TOM1-215ENST00000491987 ZNF341Q9BYN7 854 aa18.44■□□□□ 0.54
TOM1-215ENST00000491987 COG6Q9Y2V7 657 aa18.44■□□□□ 0.54
TOM1-215ENST00000491987 SNCAIPQ9Y6H5 919 aa18.44■□□□□ 0.54
TOM1-215ENST00000491987 RGS3P49796 1198 aa18.43■□□□□ 0.54
TOM1-215ENST00000491987 CCDC158Q5M9N0 1113 aa18.43■□□□□ 0.54
TOM1-215ENST00000491987 ZFPM1Q8IX07 1006 aa18.43■□□□□ 0.54
TOM1-215ENST00000491987 ZKSCAN4Q969J2 545 aaPredicted RBP18.43■□□□□ 0.54
TOM1-215ENST00000491987 FAM163AQ96GL9 167 aaPredicted RBP18.43■□□□□ 0.54
TOM1-215ENST00000491987 SNRKQ9NRH2 765 aa18.43■□□□□ 0.54
TOM1-215ENST00000491987 RAI14Q9P0K7 980 aa18.43■□□□□ 0.54
TOM1-215ENST00000491987 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
TOM1-215ENST00000491987 SPDYE5A6NIY4 337 aa18.42■□□□□ 0.54
TOM1-215ENST00000491987 CTU1Q7Z7A3 348 aaKnown RBP18.42■□□□□ 0.54
TOM1-215ENST00000491987 NSUN4Q96CB9 384 aaKnown RBP18.42■□□□□ 0.54
TOM1-215ENST00000491987 IDI2Q9BXS1 227 aa18.42■□□□□ 0.54
TOM1-215ENST00000491987 TLR7Q9NYK1 1049 aaKnown RBP18.42■□□□□ 0.54
TOM1-215ENST00000491987 DDX19BQ9UMR2 479 aa18.42■□□□□ 0.54
TOM1-215ENST00000491987 EXOC6BQ9Y2D4 811 aa18.42■□□□□ 0.54
TOM1-215ENST00000491987 TESPA1A2RU30 521 aaPredicted RBP18.41■□□□□ 0.54
TOM1-215ENST00000491987 INPP5BP32019 993 aa18.41■□□□□ 0.54
TOM1-215ENST00000491987 GSTO1P78417 241 aa18.41■□□□□ 0.54
TOM1-215ENST00000491987 PICALMQ13492 652 aa18.41■□□□□ 0.54
TOM1-215ENST00000491987 NOM1Q5C9Z4 860 aaKnown RBP18.41■□□□□ 0.54
TOM1-215ENST00000491987 MS4A4AQ96JQ5 239 aa18.41■□□□□ 0.54
TOM1-215ENST00000491987 PTPN18Q99952 460 aa18.41■□□□□ 0.54
TOM1-215ENST00000491987 CCDC8Q9H0W5 538 aaPredicted RBP18.41■□□□□ 0.54
TOM1-215ENST00000491987 LRP2BPQ9P2M1 347 aa18.41■□□□□ 0.54
TOM1-215ENST00000491987 DBNLQ9UJU6 430 aaKnown RBP18.41■□□□□ 0.54
TOM1-215ENST00000491987 DOCK2Q92608 1830 aa18.4■□□□□ 0.54
TOM1-215ENST00000491987 GPR75-ASB3A0A0A6YYF3 556 aa18.4■□□□□ 0.54
TOM1-215ENST00000491987 CCL15-CCL14A0A0B4J2E2 113 aa18.4■□□□□ 0.54
TOM1-215ENST00000491987 FKTNO75072 461 aa18.4■□□□□ 0.54
TOM1-215ENST00000491987 ENTPD3O75355 529 aa18.4■□□□□ 0.54
TOM1-215ENST00000491987 WDHD1O75717 1129 aaPredicted RBP18.4■□□□□ 0.54
TOM1-215ENST00000491987 GTF2A2P52657 109 aa18.4■□□□□ 0.54
TOM1-215ENST00000491987 CCL15Q16663 113 aa18.4■□□□□ 0.54
TOM1-215ENST00000491987 OTUD7BQ6GQQ9 843 aa18.4■□□□□ 0.54
TOM1-215ENST00000491987 ERO1BQ86YB8 467 aa18.4■□□□□ 0.54
TOM1-215ENST00000491987 ZSCAN29Q8IWY8 852 aaPredicted RBP18.4■□□□□ 0.54
TOM1-215ENST00000491987 BRI3BPQ8WY22 251 aa18.4■□□□□ 0.54
TOM1-215ENST00000491987 EAF2Q96CJ1 260 aaPredicted RBP18.4■□□□□ 0.54
TOM1-215ENST00000491987 DDX4Q9NQI0 724 aaKnown RBP18.4■□□□□ 0.54
TOM1-215ENST00000491987 LDHCP07864 332 aa18.39■□□□□ 0.53
TOM1-215ENST00000491987 RHBDL3P58872 404 aa18.39■□□□□ 0.53
TOM1-215ENST00000491987 CRHR2Q13324 411 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms