RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 A0A1W2PQ27 194 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 A0A1W2PQ64 194 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 A0A1W2PQD8 194 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 IFIT3O14879 490 aaKnown RBP12.37□□□□□ -0.43
SNED1-211ENST00000491761 SKILP12757 684 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 TDO2P48775 406 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 CTSWP56202 376 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 ANO1Q5XXA6 986 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 TMCO3Q6UWJ1 677 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 C11orf57Q6ZUT1 292 aaPredicted RBP12.37□□□□□ -0.43
SNED1-211ENST00000491761 CCDC144CPQ8IYA2 1237 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 KCNF1Q9H3M0 494 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
SNED1-211ENST00000491761 MRC1P22897 1456 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 A0A0G2JLW4 131 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 RIOK3O14730 519 aaKnown RBP12.37□□□□□ -0.43
SNED1-211ENST00000491761 PI16Q6UXB8 463 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 MRFAP1L1Q96HT8 127 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 AGXT2Q9BYV1 514 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 PAXBP1Q9Y5B6 917 aa12.37□□□□□ -0.43
SNED1-211ENST00000491761 ZNF142P52746 1687 aaPredicted RBP12.37□□□□□ -0.43
SNED1-211ENST00000491761 CDC25BP30305 580 aa12.36□□□□□ -0.43
SNED1-211ENST00000491761 PLA2G4DQ86XP0 818 aa12.36□□□□□ -0.43
SNED1-211ENST00000491761 GREM2Q9H772 168 aa12.36□□□□□ -0.43
SNED1-211ENST00000491761 BRMS1Q9HCU9 246 aa12.36□□□□□ -0.43
SNED1-211ENST00000491761 PDE8AO60658 829 aa12.36□□□□□ -0.43
SNED1-211ENST00000491761 MARCKSP29966 332 aaPredicted RBP12.36□□□□□ -0.43
SNED1-211ENST00000491761 PPFIBP1Q86W92 1011 aa12.36□□□□□ -0.43
SNED1-211ENST00000491761 DZIP3Q86Y13 1208 aaKnown RBP12.36□□□□□ -0.43
SNED1-211ENST00000491761 GOLPH3LQ9H4A5 285 aa12.36□□□□□ -0.43
SNED1-211ENST00000491761 SYKP43405 635 aa12.36□□□□□ -0.43
SNED1-211ENST00000491761 DNA2P51530 1060 aa12.36□□□□□ -0.43
SNED1-211ENST00000491761 SSRP1Q08945 709 aaKnown RBP12.36□□□□□ -0.43
SNED1-211ENST00000491761 HELBQ8NG08 1087 aaPredicted RBP12.36□□□□□ -0.43
SNED1-211ENST00000491761 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
SNED1-211ENST00000491761 IGHMBP2P38935 993 aaKnown RBP12.35□□□□□ -0.43
SNED1-211ENST00000491761 PAXIP1Q6ZW49 1069 aaPredicted RBP12.35□□□□□ -0.43
SNED1-211ENST00000491761 LINC00301Q8NCQ3 95 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 ERCC4Q92889 916 aaPredicted RBP12.35□□□□□ -0.43
SNED1-211ENST00000491761 PLCD4Q9BRC7 762 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 CLIC4Q9Y696 253 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 CRYBG1Q9Y4K1 1723 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 ZNF532Q9HCE3 1301 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 B4E1Z4 1266 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 ZPR1O75312 459 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 RXRAP19793 462 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 SCARF1Q14162 830 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 NLRP10Q86W26 655 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 PIGBQ92521 554 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 PLA2G12BQ9BX93 195 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 ADD2P35612 726 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 PUM3Q15397 648 aaKnown RBP12.35□□□□□ -0.43
SNED1-211ENST00000491761 MB21D2Q8IYB1 491 aaPredicted RBP12.35□□□□□ -0.43
SNED1-211ENST00000491761 POLR3EQ9NVU0 708 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 LRP2BPQ9P2M1 347 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 NDUFA8P51970 172 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 UBE3CQ15386 1083 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 FILIP1LQ4L180 1135 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 CEP135Q66GS9 1140 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 TTLL11Q8NHH1 800 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 SLC26A6Q9BXS9 759 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 BTG4Q9NY30 223 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 KIAA1468Q9P260 1216 aa12.35□□□□□ -0.43
SNED1-211ENST00000491761 CBFA2T2O43439 604 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 ZNF202O95125 648 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 TAF3Q5VWG9 929 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 SARM1Q6SZW1 724 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 MFSD6Q6ZSS7 791 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 LPIN2Q92539 896 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 CNNM2Q9H8M5 875 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 KIF2AO00139 706 aaPredicted RBP12.34□□□□□ -0.43
SNED1-211ENST00000491761 PDE8BO95263 885 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 CSF1RP07333 972 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 TMC6Q7Z403 805 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 CACTINQ8WUQ7 758 aaKnown RBP12.34□□□□□ -0.43
SNED1-211ENST00000491761 KRT23Q9C075 422 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 TCEAL9Q9UHQ7 104 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 PDE6AP16499 860 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 ADD1P35611 737 aaKnown RBP12.34□□□□□ -0.43
SNED1-211ENST00000491761 MCAMP43121 646 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 DDB1Q16531 1140 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 CCDC102BQ68D86 513 aa12.34□□□□□ -0.43
SNED1-211ENST00000491761 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
SNED1-211ENST00000491761 ZMYM6O95789 1325 aa12.33□□□□□ -0.43
SNED1-211ENST00000491761 CDHR2Q9BYE9 1310 aa12.33□□□□□ -0.43
SNED1-211ENST00000491761 CCDC196A0A1B0GTZ2 297 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 KRT40Q6A162 431 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 MAGEB6Q8N7X4 407 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 UBAC1Q9BSL1 405 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 CCDC94Q9BW85 323 aaPredicted RBP12.33□□□□□ -0.44
SNED1-211ENST00000491761 FDPSP14324 419 aaKnown RBP12.33□□□□□ -0.44
SNED1-211ENST00000491761 ARHGAP29Q52LW3 1261 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 SYNE4Q8N205 404 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 CCDC150Q8NCX0 1101 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 GNL3LQ9NVN8 582 aaKnown RBP12.33□□□□□ -0.44
SNED1-211ENST00000491761 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 SCN11AQ9UI33 1791 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 A0A087WWV3 80 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 MBD4O95243 580 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms