RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 RPAP1Q9BWH6 1393 aaPredicted RBP16.72■□□□□ 0.27
USF1-206ENST00000491629 DOCK2Q92608 1830 aa16.72■□□□□ 0.27
USF1-206ENST00000491629 MYH2Q9UKX2 1941 aa16.72■□□□□ 0.27
USF1-206ENST00000491629 FKBP1CQ5VVH2 108 aa16.71■□□□□ 0.27
USF1-206ENST00000491629 MIGA2Q7L4E1 593 aa16.71■□□□□ 0.27
USF1-206ENST00000491629 UBE2Q1Q7Z7E8 422 aa16.71■□□□□ 0.27
USF1-206ENST00000491629 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.27
USF1-206ENST00000491629 CPA4Q9UI42 421 aa16.71■□□□□ 0.27
USF1-206ENST00000491629 FGFR2P21802 821 aa16.7■□□□□ 0.26
USF1-206ENST00000491629 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.7■□□□□ 0.26
USF1-206ENST00000491629 TBC1D22AQ8WUA7 517 aa16.7■□□□□ 0.26
USF1-206ENST00000491629 SRRDQ9UH36 339 aa16.7■□□□□ 0.26
USF1-206ENST00000491629 PDE8BO95263 885 aa16.69■□□□□ 0.26
USF1-206ENST00000491629 GNRH1P01148 92 aa16.69■□□□□ 0.26
USF1-206ENST00000491629 OSBPP22059 807 aa16.69■□□□□ 0.26
USF1-206ENST00000491629 PPATQ06203 517 aa16.69■□□□□ 0.26
USF1-206ENST00000491629 KIF22Q14807 665 aa16.69■□□□□ 0.26
USF1-206ENST00000491629 HHIPL2Q6UWX4 724 aa16.69■□□□□ 0.26
USF1-206ENST00000491629 CHRDL2Q6WN34 429 aa16.69■□□□□ 0.26
USF1-206ENST00000491629 VPS37DQ86XT2 251 aa16.69■□□□□ 0.26
USF1-206ENST00000491629 RBM27Q9P2N5 1060 aaKnown RBP16.69■□□□□ 0.26
USF1-206ENST00000491629 ZNF112Q9UJU3 913 aa16.69■□□□□ 0.26
USF1-206ENST00000491629 KCNH4Q9UQ05 1017 aa16.69■□□□□ 0.26
USF1-206ENST00000491629 A0A0C4DFX4 3053 aa16.68■□□□□ 0.26
USF1-206ENST00000491629 PSMC4P43686 418 aa16.68■□□□□ 0.26
USF1-206ENST00000491629 METTL24Q5JXM2 366 aa16.68■□□□□ 0.26
USF1-206ENST00000491629 ANKRD23Q86SG2 305 aa16.68■□□□□ 0.26
USF1-206ENST00000491629 PRO3102Q9H379 93 aa16.68■□□□□ 0.26
USF1-206ENST00000491629 PDHXO00330 501 aa16.67■□□□□ 0.26
USF1-206ENST00000491629 PRMT2P55345 433 aa16.67■□□□□ 0.26
USF1-206ENST00000491629 NFIAQ12857 509 aa16.67■□□□□ 0.26
USF1-206ENST00000491629 CAVIN4Q5BKX8 364 aa16.67■□□□□ 0.26
USF1-206ENST00000491629 ZNF341Q9BYN7 854 aa16.67■□□□□ 0.26
USF1-206ENST00000491629 FRAT2O75474 233 aaPredicted RBP16.66■□□□□ 0.26
USF1-206ENST00000491629 GRK4P32298 578 aa16.66■□□□□ 0.26
USF1-206ENST00000491629 GPAT2Q6NUI2 795 aa16.66■□□□□ 0.26
USF1-206ENST00000491629 FAM151AQ8WW52 585 aa16.66■□□□□ 0.26
USF1-206ENST00000491629 TMOD2Q9NZR1 351 aa16.66■□□□□ 0.26
USF1-206ENST00000491629 SUGT1Q9Y2Z0 365 aa16.66■□□□□ 0.26
USF1-206ENST00000491629 DAGLAQ9Y4D2 1042 aa16.66■□□□□ 0.26
USF1-206ENST00000491629 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 WDHD1O75717 1129 aaPredicted RBP16.65■□□□□ 0.26
USF1-206ENST00000491629 BCRP11274 1271 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 CCL5P13501 91 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 GJA8P48165 433 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 RFX5P48382 616 aaPredicted RBP16.65■□□□□ 0.26
USF1-206ENST00000491629 DIXDC1Q155Q3 683 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 DCAF15Q66K64 600 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 CDC42EP5Q6NZY7 148 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 ZFPM1Q8IX07 1006 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 MRS2Q9HD23 443 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 FAM198AQ9UFP1 575 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 MYPNQ86TC9 1320 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 KIF16BQ96L93 1317 aa16.65■□□□□ 0.26
USF1-206ENST00000491629 ATRNL1Q5VV63 1379 aa16.64■□□□□ 0.26
USF1-206ENST00000491629 GJB1P08034 283 aa16.64■□□□□ 0.25
USF1-206ENST00000491629 PRKCZQ05513 592 aa16.64■□□□□ 0.25
USF1-206ENST00000491629 TCP10Q12799 353 aa16.64■□□□□ 0.25
USF1-206ENST00000491629 NOL9Q5SY16 702 aaKnown RBP16.64■□□□□ 0.25
USF1-206ENST00000491629 DPF3Q92784 378 aa16.64■□□□□ 0.25
USF1-206ENST00000491629 HOOK2Q96ED9 719 aa16.64■□□□□ 0.25
USF1-206ENST00000491629 GABRQQ9UN88 632 aa16.64■□□□□ 0.25
USF1-206ENST00000491629 MAST3O60307 1309 aa16.64■□□□□ 0.25
USF1-206ENST00000491629 CUL9Q8IWT3 2517 aa16.63■□□□□ 0.25
USF1-206ENST00000491629 FMNL1O95466 1100 aaPredicted RBP16.63■□□□□ 0.25
USF1-206ENST00000491629 SLURP2P0DP57 97 aa16.63■□□□□ 0.25
USF1-206ENST00000491629 CYP2C8P10632 490 aa16.63■□□□□ 0.25
USF1-206ENST00000491629 PUM3Q15397 648 aaKnown RBP16.63■□□□□ 0.25
USF1-206ENST00000491629 MRPL50Q8N5N7 158 aaKnown RBP16.63■□□□□ 0.25
USF1-206ENST00000491629 RAET1EQ8TD07 263 aa16.63■□□□□ 0.25
USF1-206ENST00000491629 USP44Q9H0E7 712 aa16.63■□□□□ 0.25
USF1-206ENST00000491629 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
USF1-206ENST00000491629 PHF20L1A8MW92 1017 aa16.62■□□□□ 0.25
USF1-206ENST00000491629 PRDX5P30044 214 aa16.62■□□□□ 0.25
USF1-206ENST00000491629 ATG9AQ7Z3C6 839 aa16.62■□□□□ 0.25
USF1-206ENST00000491629 RNF208Q9H0X6 261 aa16.62■□□□□ 0.25
USF1-206ENST00000491629 UNC93B1Q9H1C4 597 aa16.62■□□□□ 0.25
USF1-206ENST00000491629 PLXNB2O15031 1838 aa16.61■□□□□ 0.25
USF1-206ENST00000491629 IFIT1P09914 478 aaKnown RBP16.61■□□□□ 0.25
USF1-206ENST00000491629 ZBTB7BO15156 539 aaPredicted RBP16.6■□□□□ 0.25
USF1-206ENST00000491629 HOXD10P28358 340 aa16.6■□□□□ 0.25
USF1-206ENST00000491629 SH3BP5LQ7L8J4 393 aa16.6■□□□□ 0.25
USF1-206ENST00000491629 NKX2-3Q8TAU0 364 aa16.6■□□□□ 0.25
USF1-206ENST00000491629 WDR66Q8TBY9 1149 aa16.6■□□□□ 0.25
USF1-206ENST00000491629 U2AF1L4Q8WU68 220 aaKnown RBP16.6■□□□□ 0.25
USF1-206ENST00000491629 ZNF521Q96K83 1311 aa16.6■□□□□ 0.25
USF1-206ENST00000491629 RFX7Q2KHR2 1363 aa16.6■□□□□ 0.25
USF1-206ENST00000491629 EYA2O00167 538 aa16.59■□□□□ 0.25
USF1-206ENST00000491629 SOX1O00570 391 aaPredicted RBP16.59■□□□□ 0.25
USF1-206ENST00000491629 CXCL11O14625 94 aa16.59■□□□□ 0.25
USF1-206ENST00000491629 LPIN2Q92539 896 aa16.59■□□□□ 0.25
USF1-206ENST00000491629 USP40Q9NVE5 1235 aa16.59■□□□□ 0.25
USF1-206ENST00000491629 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.59■□□□□ 0.25
USF1-206ENST00000491629 LOC285556D6RIA3 1793 aa16.59■□□□□ 0.25
USF1-206ENST00000491629 A0A0G2JLL6 359 aaPredicted RBP16.58■□□□□ 0.24
USF1-206ENST00000491629 SGPL1O95470 568 aa16.58■□□□□ 0.24
USF1-206ENST00000491629 ELNP15502 786 aa16.58■□□□□ 0.24
USF1-206ENST00000491629 PTPRAP18433 802 aa16.58■□□□□ 0.24
USF1-206ENST00000491629 PRRT2Q7Z6L0 340 aaPredicted RBP16.58■□□□□ 0.24
USF1-206ENST00000491629 PARK7Q99497 189 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms