RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 FKBP1CQ5VVH2 108 aa19.83■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 NAA16Q6N069 864 aaPredicted RBP19.83■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 DNAJC2Q99543 621 aaKnown RBP19.83■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 ANTXR1Q9H6X2 564 aa19.83■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 USP40Q9NVE5 1235 aa19.83■□□□□ 0.77
MSH5-SAPCD1-206ENST00000491552 DOCK2Q92608 1830 aa19.83■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 IDH1O75874 414 aaKnown RBP19.82■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 TTF1Q15361 905 aaPredicted RBP19.82■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 ANKRD45Q5TZF3 282 aa19.82■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 BOLA2Q9H3K6 86 aa19.82■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 ECHDC1Q9NTX5 307 aa19.82■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 MYO5AQ9Y4I1 1855 aaKnown RBP19.82■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 GPR75-ASB3A0A0A6YYF3 556 aa19.81■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 IGHDP01880 384 aa19.81■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 HUNKP57058 714 aa19.81■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 SUPT20HL1Q3ZLR7 823 aa19.81■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 FAM83AQ86UY5 434 aa19.81■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 HHIPL1Q96JK4 782 aa19.81■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 TMEM39BQ9GZU3 492 aa19.81■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 SSC5DA1L4H1 1573 aa19.81■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 GOLIM4O00461 696 aa19.8■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 MAP3K12Q12852 859 aa19.8■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 TTLL12Q14166 644 aaPredicted RBP19.8■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 NBPF12Q5TAG4 269 aaPredicted RBP19.8■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 PAXIP1Q6ZW49 1069 aaPredicted RBP19.8■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 SMC5Q8IY18 1101 aa19.8■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 TEPSINQ96N21 525 aa19.8■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 HAUS7Q99871 368 aa19.8■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 NOL10Q9BSC4 688 aaKnown RBP19.8■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 RPAP1Q9BWH6 1393 aaPredicted RBP19.8■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 NFIAQ12857 509 aa19.79■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 MOB2Q70IA6 237 aa19.79■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 PAG1Q9NWQ8 432 aa19.79■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 RFX7Q2KHR2 1363 aa19.79■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 MAP4K4O95819 1239 aaPredicted RBP19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 CYP7A1P22680 504 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 ECE1P42892 770 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 VEGFBP49765 207 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 RHBDL3P58872 404 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 PRKG1Q13976 671 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 TSHZ3Q63HK5 1081 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 CYP4F22Q6NT55 531 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 TMED8Q6PL24 325 aaPredicted RBP19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 ARMC9Q7Z3E5 817 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 CDAN1Q8IWY9 1227 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 MAGEB6Q8N7X4 407 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 FAM151AQ8WW52 585 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 EDC3Q96F86 508 aaKnown RBP19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 IDI2Q9BXS1 227 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 FAM198AQ9UFP1 575 aa19.78■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 TTC41PQ6P2S7 1318 aa19.77■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 BAG3O95817 575 aa19.77■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 TCP10Q12799 353 aa19.77■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 RGMBQ6NW40 437 aa19.77■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 ADGRA1Q86SQ6 560 aa19.77■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 OTUD7AQ8TE49 926 aaPredicted RBP19.77■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 CAPNS2Q96L46 248 aa19.77■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 ANGEL1Q9UNK9 670 aaKnown RBP19.77■□□□□ 0.76
MSH5-SAPCD1-206ENST00000491552 WDR33Q9C0J8 1336 aaKnown RBP19.76■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 UBE2Q2LH0YL09 131 aa19.76■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 PPP1R12BO60237 982 aaPredicted RBP19.76■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 WDHD1O75717 1129 aaPredicted RBP19.76■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 PLCG2P16885 1265 aa19.76■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 MX1P20591 662 aa19.76■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 RGS3P49796 1198 aa19.76■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 JMYQ8N9B5 988 aa19.76■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 AATFQ9NY61 560 aaKnown RBP eCLIP19.76■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 SALL3Q9BXA9 1300 aa19.76■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 ERC2O15083 957 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 ENTPD3O75355 529 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 PPP4CP60510 307 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 GRM1Q13255 1194 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 PICALMQ13492 652 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 MAP3K11Q16584 847 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 B4GALNT3Q6L9W6 998 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 TEX11Q8IYF3 940 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 HOOK2Q96ED9 719 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 LNPKQ9C0E8 428 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 FZD1Q9UP38 647 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 THSD7BQ9C0I4 1608 aa19.75■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 PDE6AP16499 860 aa19.74■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 ZNF157P51786 506 aaPredicted RBP19.74■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 SLC9C2Q5TAH2 1124 aa19.74■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 PI4K2BQ8TCG2 481 aa19.74■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 SH3RF3Q8TEJ3 882 aaPredicted RBP19.74■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.74■□□□□ 0.752e-10■■■□□ 18.6
MSH5-SAPCD1-206ENST00000491552 DDX4Q9NQI0 724 aaKnown RBP19.74■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 GLRX3O76003 335 aaKnown RBP19.73■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 IREB2P48200 963 aaKnown RBP19.73■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 NUCB1Q02818 461 aa19.73■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 CHD1LQ86WJ1 897 aa19.73■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 CERS3Q8IU89 383 aa19.73■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 ZFPM1Q8IX07 1006 aa19.73■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 MIGA1Q8NAN2 632 aa19.73■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 USP2O75604 605 aaPredicted RBP19.72■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 NPM3O75607 178 aaKnown RBP19.72■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 SLC10A3P09131 477 aa19.72■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 DYNLL1P63167 89 aaKnown RBP19.72■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 LDLRAD1Q5T700 205 aa19.72■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 CCDC102AQ96A19 550 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms