RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 C7orf61Q8IZ16 206 aa14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 TSPYL6Q8N831 410 aa14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 TDRD7Q8NHU6 1098 aaKnown RBP14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 CNNM1Q9NRU3 951 aa14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 TMOD2Q9NZR1 351 aa14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 SNAP23O00161 211 aa14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 HIBADHP31937 336 aaKnown RBP14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 GRK4P32298 578 aa14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 PPIL2Q13356 520 aa14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 UBE4AQ14139 1066 aa14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 DCAF15Q66K64 600 aa14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 ALYREFQ86V81 257 aaKnown RBP14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 RAET1EQ8TD07 263 aa14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 TRIM47Q96LD4 638 aa14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 TMEM39BQ9GZU3 492 aa14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 BIN2Q9UBW5 565 aaPredicted RBP14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 SRRDQ9UH36 339 aa14.14□□□□□ -0.15
CLCNKA-206ENST00000491433 BTBD19C9JJ37 291 aa14.13□□□□□ -0.15
CLCNKA-206ENST00000491433 PLIN1O60240 522 aa14.13□□□□□ -0.15
CLCNKA-206ENST00000491433 CRKP46108 304 aa14.13□□□□□ -0.15
CLCNKA-206ENST00000491433 PPATQ06203 517 aa14.13□□□□□ -0.15
CLCNKA-206ENST00000491433 TBC1D22AQ8WUA7 517 aa14.13□□□□□ -0.15
CLCNKA-206ENST00000491433 ARHGAP39Q9C0H5 1083 aa14.13□□□□□ -0.15
CLCNKA-206ENST00000491433 JAG2Q9Y219 1238 aa14.13□□□□□ -0.15
CLCNKA-206ENST00000491433 AOX1Q06278 1338 aa14.13□□□□□ -0.15
CLCNKA-206ENST00000491433 SGPL1O95470 568 aa14.12□□□□□ -0.15
CLCNKA-206ENST00000491433 PSMC4P43686 418 aa14.12□□□□□ -0.15
CLCNKA-206ENST00000491433 FOXO4P98177 505 aa14.12□□□□□ -0.15
CLCNKA-206ENST00000491433 FKBP1CQ5VVH2 108 aa14.12□□□□□ -0.15
CLCNKA-206ENST00000491433 C17orf99Q6UX52 265 aa14.12□□□□□ -0.15
CLCNKA-206ENST00000491433 G2E3Q7L622 706 aa14.12□□□□□ -0.15
CLCNKA-206ENST00000491433 FAM83AQ86UY5 434 aa14.12□□□□□ -0.15
CLCNKA-206ENST00000491433 WRNIP1Q96S55 665 aa14.12□□□□□ -0.15
CLCNKA-206ENST00000491433 SNCAIPQ9Y6H5 919 aa14.12□□□□□ -0.15
CLCNKA-206ENST00000491433 MAST3O60307 1309 aa14.12□□□□□ -0.15
CLCNKA-206ENST00000491433 FMNL1O95466 1100 aaPredicted RBP14.11□□□□□ -0.15
CLCNKA-206ENST00000491433 TFRCP02786 760 aaKnown RBP14.11□□□□□ -0.15
CLCNKA-206ENST00000491433 ANKRD23Q86SG2 305 aa14.11□□□□□ -0.15
CLCNKA-206ENST00000491433 VPS37DQ86XT2 251 aa14.11□□□□□ -0.15
CLCNKA-206ENST00000491433 TEKT1Q969V4 418 aa14.11□□□□□ -0.15
CLCNKA-206ENST00000491433 P2RX7Q99572 595 aaKnown RBP14.11□□□□□ -0.15
CLCNKA-206ENST00000491433 MRIQ9BWK5 157 aa14.11□□□□□ -0.15
CLCNKA-206ENST00000491433 RIPOR2Q9Y4F9 1068 aa14.11□□□□□ -0.15
CLCNKA-206ENST00000491433 MYPNQ86TC9 1320 aa14.11□□□□□ -0.15
CLCNKA-206ENST00000491433 ZSWIM8A7E2V4 1837 aa14.11□□□□□ -0.15
CLCNKA-206ENST00000491433 IRF6O14896 467 aa14.1□□□□□ -0.15
CLCNKA-206ENST00000491433 SYN1P17600 705 aa14.1□□□□□ -0.15
CLCNKA-206ENST00000491433 LMBR1LQ6UX01 489 aa14.1□□□□□ -0.15
CLCNKA-206ENST00000491433 SLAIN1Q8ND83 568 aa14.1□□□□□ -0.15
CLCNKA-206ENST00000491433 ZNF341Q9BYN7 854 aa14.1□□□□□ -0.15
CLCNKA-206ENST00000491433 RPAP1Q9BWH6 1393 aaPredicted RBP14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 FRAT2O75474 233 aaPredicted RBP14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 FOSL2P15408 326 aa14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 OSBPP22059 807 aa14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 CCDC27Q2M243 656 aa14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 CAVIN4Q5BKX8 364 aa14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 NECAB2Q7Z6G3 386 aa14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 CDAN1Q8IWY9 1227 aa14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 TSR2Q969E8 191 aaKnown RBP14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 FAM84BQ96KN1 310 aaPredicted RBP14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 CPA4Q9UI42 421 aa14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 SUGT1Q9Y2Z0 365 aa14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 IL16Q14005 1332 aa14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 NCOR1O75376 2440 aa14.09□□□□□ -0.15
CLCNKA-206ENST00000491433 GYG1P46976 350 aa14.08□□□□□ -0.16
CLCNKA-206ENST00000491433 FCGRTP55899 365 aa14.08□□□□□ -0.16
CLCNKA-206ENST00000491433 MYLIPQ8WY64 445 aa14.08□□□□□ -0.16
CLCNKA-206ENST00000491433 ZKSCAN4Q969J2 545 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-206ENST00000491433 PAWRQ96IZ0 340 aaKnown RBP14.08□□□□□ -0.16
CLCNKA-206ENST00000491433 ZDHHC15Q96MV8 337 aa14.08□□□□□ -0.16
CLCNKA-206ENST00000491433 PARK7Q99497 189 aaKnown RBP14.08□□□□□ -0.16
CLCNKA-206ENST00000491433 MROH5Q6ZUA9 1318 aa14.08□□□□□ -0.16
CLCNKA-206ENST00000491433 BDP1A6H8Y1 2624 aa14.08□□□□□ -0.16
CLCNKA-206ENST00000491433 GRM8O00222 908 aa14.07□□□□□ -0.16
CLCNKA-206ENST00000491433 PDHXO00330 501 aa14.07□□□□□ -0.16
CLCNKA-206ENST00000491433 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-206ENST00000491433 ZNF594Q96JF6 807 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-206ENST00000491433 UNC93B1Q9H1C4 597 aa14.07□□□□□ -0.16
CLCNKA-206ENST00000491433 C9orf78Q9NZ63 289 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-206ENST00000491433 KCNH4Q9UQ05 1017 aa14.07□□□□□ -0.16
CLCNKA-206ENST00000491433 MGAMO43451 1857 aa14.07□□□□□ -0.16
CLCNKA-206ENST00000491433 BEND3Q5T5X7 828 aa14.06□□□□□ -0.16
CLCNKA-206ENST00000491433 HHIPL2Q6UWX4 724 aa14.06□□□□□ -0.16
CLCNKA-206ENST00000491433 ADAMTS19Q8TE59 1207 aa14.06□□□□□ -0.16
CLCNKA-206ENST00000491433 SEMA6BQ9H3T3 888 aa14.06□□□□□ -0.16
CLCNKA-206ENST00000491433 PRKRIP1Q9H875 184 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-206ENST00000491433 COL2A1P02458 1487 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-206ENST00000491433 AK9Q5TCS8 1911 aa14.05□□□□□ -0.16
CLCNKA-206ENST00000491433 MUC6Q6W4X9 2439 aa14.05□□□□□ -0.16
CLCNKA-206ENST00000491433 CHAF1AQ13111 956 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-206ENST00000491433 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-206ENST00000491433 FBXO33Q7Z6M2 555 aa14.05□□□□□ -0.16
CLCNKA-206ENST00000491433 WWC1Q8IX03 1113 aa14.05□□□□□ -0.16
CLCNKA-206ENST00000491433 UHRF1Q96T88 793 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-206ENST00000491433 ADGRA2Q96PE1 1338 aa14.05□□□□□ -0.16
CLCNKA-206ENST00000491433 CXCL11O14625 94 aa14.04□□□□□ -0.16
CLCNKA-206ENST00000491433 ALDH1L1O75891 902 aa14.04□□□□□ -0.16
CLCNKA-206ENST00000491433 CTGFP29279 349 aa14.04□□□□□ -0.16
CLCNKA-206ENST00000491433 CACNB3P54284 484 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms