RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 GPRC5DQ9NZD1 345 aa26.07■■□□□ 1.76
VCPKMT-204ENST00000491402 CRKP46108 304 aa26.06■■□□□ 1.76
VCPKMT-204ENST00000491402 DYNLL1P63167 89 aaKnown RBP26.06■■□□□ 1.76
VCPKMT-204ENST00000491402 MICALL2Q8IY33 904 aa26.06■■□□□ 1.76
VCPKMT-204ENST00000491402 NMRK2Q9NPI5 230 aa26.06■■□□□ 1.76
VCPKMT-204ENST00000491402 SERPINA10Q9UK55 444 aa26.06■■□□□ 1.76
VCPKMT-204ENST00000491402 GPR75-ASB3A0A0A6YYF3 556 aa26.05■■□□□ 1.76
VCPKMT-204ENST00000491402 USP17L8P0C7I0 530 aa26.05■■□□□ 1.76
VCPKMT-204ENST00000491402 LMOD1P29536 600 aaPredicted RBP26.05■■□□□ 1.76
VCPKMT-204ENST00000491402 BTDP43251 543 aa26.05■■□□□ 1.76
VCPKMT-204ENST00000491402 USP26Q9BXU7 913 aa26.05■■□□□ 1.76
VCPKMT-204ENST00000491402 BAG3O95817 575 aa26.05■■□□□ 1.76
VCPKMT-204ENST00000491402 HSPD1P10809 573 aaKnown RBP26.05■■□□□ 1.76
VCPKMT-204ENST00000491402 OGFOD1Q8N543 542 aa26.05■■□□□ 1.76
VCPKMT-204ENST00000491402 NOL10Q9BSC4 688 aaKnown RBP26.05■■□□□ 1.76
VCPKMT-204ENST00000491402 CDK5RAP2Q96SN8 1893 aa26.04■■□□□ 1.76
VCPKMT-204ENST00000491402 EPB41L2O43491 1005 aaKnown RBP26.04■■□□□ 1.76
VCPKMT-204ENST00000491402 PPP4CP60510 307 aa26.04■■□□□ 1.76
VCPKMT-204ENST00000491402 ZDHHC15Q96MV8 337 aa26.04■■□□□ 1.76
VCPKMT-204ENST00000491402 GPBP1L1Q9HC44 474 aaPredicted RBP26.04■■□□□ 1.76
VCPKMT-204ENST00000491402 HACL1Q9UJ83 578 aa26.04■■□□□ 1.76
VCPKMT-204ENST00000491402 HDAC9Q9UKV0 1011 aa26.04■■□□□ 1.76
VCPKMT-204ENST00000491402 H7C1D1 291 aa26.03■■□□□ 1.76
VCPKMT-204ENST00000491402 FOXP2O15409 715 aa26.03■■□□□ 1.76
VCPKMT-204ENST00000491402 GNAT2P19087 354 aa26.03■■□□□ 1.76
VCPKMT-204ENST00000491402 CERS3Q8IU89 383 aa26.03■■□□□ 1.76
VCPKMT-204ENST00000491402 MAP4K1Q92918 833 aa26.03■■□□□ 1.76
VCPKMT-204ENST00000491402 DSCC1Q9BVC3 393 aa26.03■■□□□ 1.76
VCPKMT-204ENST00000491402 WDR90Q96KV7 1748 aa26.03■■□□□ 1.76
VCPKMT-204ENST00000491402 VEGFAP15692 232 aaPredicted RBP26.02■■□□□ 1.76
VCPKMT-204ENST00000491402 IQCA1LA6NCM1 817 aa26.02■■□□□ 1.76
VCPKMT-204ENST00000491402 RBM5P52756 815 aaKnown RBP eCLIP26.02■■□□□ 1.76
VCPKMT-204ENST00000491402 APOBEC3HQ6NTF7 200 aaKnown RBP26.02■■□□□ 1.76
VCPKMT-204ENST00000491402 ZNF784Q8NCA9 323 aaPredicted RBP26.02■■□□□ 1.76
VCPKMT-204ENST00000491402 SLC4A4Q9Y6R1 1079 aa26.02■■□□□ 1.76
VCPKMT-204ENST00000491402 ECM29Q5VYK3 1845 aa26.02■■□□□ 1.76
VCPKMT-204ENST00000491402 PRKAB2O43741 272 aa26.01■■□□□ 1.75
VCPKMT-204ENST00000491402 RBM26Q5T8P6 1007 aaKnown RBP26.01■■□□□ 1.75
VCPKMT-204ENST00000491402 SAMD7Q7Z3H4 446 aa26.01■■□□□ 1.75
VCPKMT-204ENST00000491402 PCDHAC2Q9Y5I4 1007 aa26.01■■□□□ 1.75
VCPKMT-204ENST00000491402 PLCG2P16885 1265 aa26■■□□□ 1.75
VCPKMT-204ENST00000491402 ZNF280AP59817 542 aaPredicted RBP26■■□□□ 1.75
VCPKMT-204ENST00000491402 CFAP100Q494V2 611 aa26■■□□□ 1.75
VCPKMT-204ENST00000491402 SH3RF3Q8TEJ3 882 aaPredicted RBP26■■□□□ 1.75
VCPKMT-204ENST00000491402 FOCADQ5VW36 1801 aa26■■□□□ 1.75
VCPKMT-204ENST00000491402 PATL2C9JE40 543 aaKnown RBP26■■□□□ 1.75
VCPKMT-204ENST00000491402 EGFRP00533 1210 aa26■■□□□ 1.75
VCPKMT-204ENST00000491402 EPHX2P34913 555 aa26■■□□□ 1.75
VCPKMT-204ENST00000491402 RHBDL3P58872 404 aa26■■□□□ 1.75
VCPKMT-204ENST00000491402 TBC1D10BQ4KMP7 808 aaPredicted RBP26■■□□□ 1.75
VCPKMT-204ENST00000491402 SDR42E1Q8WUS8 393 aa26■■□□□ 1.75
VCPKMT-204ENST00000491402 C22orf23Q9BZE7 217 aa26■■□□□ 1.75
VCPKMT-204ENST00000491402 CRNKL1Q9BZJ0 848 aaKnown RBP26■■□□□ 1.75
VCPKMT-204ENST00000491402 TAF1DQ9H5J8 278 aaPredicted RBP26■■□□□ 1.75
VCPKMT-204ENST00000491402 SCN4AP35499 1836 aa25.99■■□□□ 1.75
VCPKMT-204ENST00000491402 GSG1L2A8MUP6 293 aa25.99■■□□□ 1.75
VCPKMT-204ENST00000491402 APPP05067 770 aa25.99■■□□□ 1.75
VCPKMT-204ENST00000491402 MMP14P50281 582 aa25.99■■□□□ 1.75
VCPKMT-204ENST00000491402 MYOZ2Q9NPC6 264 aa25.99■■□□□ 1.75
VCPKMT-204ENST00000491402 RBM8AQ9Y5S9 174 aaKnown RBP25.99■■□□□ 1.75
VCPKMT-204ENST00000491402 BAZ2AQ9UIF9 1905 aaKnown RBP25.99■■□□□ 1.75
VCPKMT-204ENST00000491402 RPAP1Q9BWH6 1393 aaPredicted RBP25.98■■□□□ 1.75
VCPKMT-204ENST00000491402 EPB41L4AQ9HCS5 686 aaPredicted RBP25.98■■□□□ 1.75
VCPKMT-204ENST00000491402 ADARB2Q9NS39 739 aaKnown RBP25.98■■□□□ 1.75
VCPKMT-204ENST00000491402 TRPM4Q8TD43 1214 aa25.97■■□□□ 1.75
VCPKMT-204ENST00000491402 TBC1D32Q96NH3 1257 aa25.97■■□□□ 1.75
VCPKMT-204ENST00000491402 U3KPZ7 1027 aaPredicted RBP25.97■■□□□ 1.75
VCPKMT-204ENST00000491402 SPDYE2BA6NHP3 402 aa25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 FGAP02671 866 aa25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 SPDYE6P0CI01 402 aa25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 HSPA4P34932 840 aa25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 NECTIN1Q15223 517 aa25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 DLGAP5Q15398 846 aa25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 CDC42EP5Q6NZY7 148 aa25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 TEX11Q8IYF3 940 aa25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 IFNL3Q8IZI9 196 aa25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 MTMR14Q8NCE2 650 aa25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 PRMT6Q96LA8 375 aaPredicted RBP25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 NAV1Q8NEY1 1877 aa25.96■■□□□ 1.75
VCPKMT-204ENST00000491402 ZMYM6O95789 1325 aa25.95■■□□□ 1.75
VCPKMT-204ENST00000491402 RBM25P49756 843 aaKnown RBP25.95■■□□□ 1.75
VCPKMT-204ENST00000491402 HIRAP54198 1017 aaPredicted RBP25.95■■□□□ 1.75
VCPKMT-204ENST00000491402 EAPPQ56P03 285 aaPredicted RBP25.95■■□□□ 1.75
VCPKMT-204ENST00000491402 NACAP1Q9BZK3 213 aa25.95■■□□□ 1.75
VCPKMT-204ENST00000491402 USP40Q9NVE5 1235 aa25.95■■□□□ 1.75
VCPKMT-204ENST00000491402 MCCP23508 829 aa25.95■■□□□ 1.74
VCPKMT-204ENST00000491402 ALX1Q15699 326 aa25.95■■□□□ 1.74
VCPKMT-204ENST00000491402 KIF4BQ2VIQ3 1234 aa25.95■■□□□ 1.74
VCPKMT-204ENST00000491402 TGFBRAP1Q8WUH2 860 aa25.95■■□□□ 1.74
VCPKMT-204ENST00000491402 NAPBQ9H115 298 aa25.95■■□□□ 1.74
VCPKMT-204ENST00000491402 DCP1AQ9NPI6 582 aaPredicted RBP25.95■■□□□ 1.74
VCPKMT-204ENST00000491402 ATP8A2Q9NTI2 1148 aa25.95■■□□□ 1.74
VCPKMT-204ENST00000491402 LAMA4Q16363 1823 aa25.94■■□□□ 1.74
VCPKMT-204ENST00000491402 USP5P45974 858 aa25.94■■□□□ 1.74
VCPKMT-204ENST00000491402 GIMAP6Q6P9H5 292 aa25.94■■□□□ 1.74
VCPKMT-204ENST00000491402 TDO2P48775 406 aa25.93■■□□□ 1.74
VCPKMT-204ENST00000491402 USP50Q70EL3 339 aaPredicted RBP25.93■■□□□ 1.74
VCPKMT-204ENST00000491402 PNMA8AQ86V59 439 aaPredicted RBP25.93■■□□□ 1.74
VCPKMT-204ENST00000491402 CTNNA3Q9UI47 895 aa25.93■■□□□ 1.74
VCPKMT-204ENST00000491402 DDX60LQ5H9U9 1706 aaKnown RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms