RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 IFNL1Q8IU54 200 aa20.39■□□□□ 0.85
PDLIM2-217ENST00000491330 NOL10Q9BSC4 688 aaKnown RBP20.39■□□□□ 0.85
PDLIM2-217ENST00000491330 ZNF341Q9BYN7 854 aa20.39■□□□□ 0.85
PDLIM2-217ENST00000491330 SURF6O75683 361 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-217ENST00000491330 PRDX5P30044 214 aa20.38■□□□□ 0.85
PDLIM2-217ENST00000491330 ATP8B2P98198 1209 aa20.38■□□□□ 0.85
PDLIM2-217ENST00000491330 OPTNQ96CV9 577 aa20.38■□□□□ 0.85
PDLIM2-217ENST00000491330 TEPSINQ96N21 525 aa20.38■□□□□ 0.85
PDLIM2-217ENST00000491330 CFHR5Q9BXR6 569 aa20.38■□□□□ 0.85
PDLIM2-217ENST00000491330 DAGLAQ9Y4D2 1042 aa20.38■□□□□ 0.85
PDLIM2-217ENST00000491330 ZNF646O15015 1829 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-217ENST00000491330 ADORA1P30542 326 aa20.37■□□□□ 0.85
PDLIM2-217ENST00000491330 ZSCAN29Q8IWY8 852 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-217ENST00000491330 ZNF296Q8WUU4 475 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-217ENST00000491330 WRNIP1Q96S55 665 aa20.37■□□□□ 0.85
PDLIM2-217ENST00000491330 AOX1Q06278 1338 aa20.36■□□□□ 0.85
PDLIM2-217ENST00000491330 RASGRF1Q13972 1273 aa20.36■□□□□ 0.85
PDLIM2-217ENST00000491330 DIXDC1Q155Q3 683 aa20.36■□□□□ 0.85
PDLIM2-217ENST00000491330 CDC42EP5Q6NZY7 148 aa20.36■□□□□ 0.85
PDLIM2-217ENST00000491330 ERO1BQ86YB8 467 aa20.36■□□□□ 0.85
PDLIM2-217ENST00000491330 GPR108Q9NPR9 543 aa20.36■□□□□ 0.85
PDLIM2-217ENST00000491330 RPAP1Q9BWH6 1393 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-217ENST00000491330 PNMA6EA0A0J9YXQ4 647 aa20.35■□□□□ 0.85
PDLIM2-217ENST00000491330 MAP4K4O95819 1239 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-217ENST00000491330 CETPP11597 493 aa20.35■□□□□ 0.85
PDLIM2-217ENST00000491330 TCP10Q12799 353 aa20.35■□□□□ 0.85
PDLIM2-217ENST00000491330 TTC39AQ5SRH9 613 aa20.35■□□□□ 0.85
PDLIM2-217ENST00000491330 SPATA5Q8NB90 893 aa20.35■□□□□ 0.85
PDLIM2-217ENST00000491330 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.35■□□□□ 0.85
PDLIM2-217ENST00000491330 RAI14Q9P0K7 980 aa20.35■□□□□ 0.85
PDLIM2-217ENST00000491330 LRP2BPQ9P2M1 347 aa20.35■□□□□ 0.85
PDLIM2-217ENST00000491330 IGSF3O75054 1194 aa20.34■□□□□ 0.85
PDLIM2-217ENST00000491330 ENTPD3O75355 529 aa20.34■□□□□ 0.85
PDLIM2-217ENST00000491330 VGLL4Q14135 290 aa20.34■□□□□ 0.85
PDLIM2-217ENST00000491330 HSP90AB4PQ58FF6 505 aa20.34■□□□□ 0.85
PDLIM2-217ENST00000491330 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-217ENST00000491330 ERC1Q8IUD2 1116 aa20.34■□□□□ 0.85
PDLIM2-217ENST00000491330 OTUD5Q96G74 571 aa20.34■□□□□ 0.85
PDLIM2-217ENST00000491330 FAM163AQ96GL9 167 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-217ENST00000491330 ERO1AQ96HE7 468 aa20.34■□□□□ 0.85
PDLIM2-217ENST00000491330 SSC5DA1L4H1 1573 aa20.34■□□□□ 0.85
PDLIM2-217ENST00000491330 AKAP11Q9UKA4 1901 aa20.33■□□□□ 0.85
PDLIM2-217ENST00000491330 CCL15-CCL14A0A0B4J2E2 113 aa20.33■□□□□ 0.85
PDLIM2-217ENST00000491330 SNAPC2Q13487 334 aa20.33■□□□□ 0.85
PDLIM2-217ENST00000491330 CCL15Q16663 113 aa20.33■□□□□ 0.85
PDLIM2-217ENST00000491330 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.33■□□□□ 0.85
PDLIM2-217ENST00000491330 SSH3Q8TE77 659 aa20.33■□□□□ 0.85
PDLIM2-217ENST00000491330 ZFYVE28Q9HCC9 887 aa20.33■□□□□ 0.85
PDLIM2-217ENST00000491330 TNNQ9UQP3 1299 aa20.33■□□□□ 0.85
PDLIM2-217ENST00000491330 ECM29Q5VYK3 1845 aa20.32■□□□□ 0.84
PDLIM2-217ENST00000491330 SPDYE5A6NIY4 337 aa20.32■□□□□ 0.84
PDLIM2-217ENST00000491330 ZBTB7BO15156 539 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-217ENST00000491330 POLA2Q14181 598 aa20.32■□□□□ 0.84
PDLIM2-217ENST00000491330 TESPA1A2RU30 521 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-217ENST00000491330 HMMRO75330 724 aa20.31■□□□□ 0.84
PDLIM2-217ENST00000491330 BAG3O95817 575 aa20.31■□□□□ 0.84
PDLIM2-217ENST00000491330 MLLT1Q03111 559 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-217ENST00000491330 PPATQ06203 517 aa20.31■□□□□ 0.84
PDLIM2-217ENST00000491330 MIGA2Q7L4E1 593 aa20.31■□□□□ 0.84
PDLIM2-217ENST00000491330 IDI2Q9BXS1 227 aa20.31■□□□□ 0.84
PDLIM2-217ENST00000491330 HMG20BQ9P0W2 317 aa20.31■□□□□ 0.84
PDLIM2-217ENST00000491330 ARAP2Q8WZ64 1704 aa20.3■□□□□ 0.84
PDLIM2-217ENST00000491330 ARID4AP29374 1257 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-217ENST00000491330 BTDP43251 543 aa20.3■□□□□ 0.84
PDLIM2-217ENST00000491330 TAF1CQ15572 869 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-217ENST00000491330 TNNI3KQ59H18 835 aa20.3■□□□□ 0.84
PDLIM2-217ENST00000491330 PICK1Q9NRD5 415 aa20.3■□□□□ 0.84
PDLIM2-217ENST00000491330 DDX19BQ9UMR2 479 aa20.3■□□□□ 0.84
PDLIM2-217ENST00000491330 FPGT-TNNI3KV9GXZ4 949 aa20.3■□□□□ 0.84
PDLIM2-217ENST00000491330 MROH7-TTC4A0A0A0MT08 1334 aa20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 GAKO14976 1311 aa20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 IGF2BP3O00425 579 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 PLCG2P16885 1265 aa20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 RGS3P49796 1198 aa20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 MECOMQ03112 1051 aa20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 PPIL2Q13356 520 aa20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 KIF22Q14807 665 aa20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 FBXO46Q6PJ61 603 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 CDAN1Q8IWY9 1227 aa20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 ZKSCAN4Q969J2 545 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 C1orf115Q9H7X2 142 aa20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 ZCCHC17Q9NP64 241 aaKnown RBP20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
PDLIM2-217ENST00000491330 SP3Q02447 781 aa20.28■□□□□ 0.84
PDLIM2-217ENST00000491330 CASP8AP2Q9UKL3 1982 aa20.28■□□□□ 0.84
PDLIM2-217ENST00000491330 GPR75-ASB3A0A0A6YYF3 556 aa20.27■□□□□ 0.84
PDLIM2-217ENST00000491330 NFIAQ12857 509 aa20.27■□□□□ 0.84
PDLIM2-217ENST00000491330 CRHR2Q13324 411 aa20.27■□□□□ 0.84
PDLIM2-217ENST00000491330 PICALMQ13492 652 aa20.27■□□□□ 0.84
PDLIM2-217ENST00000491330 SNCAIPQ9Y6H5 919 aa20.27■□□□□ 0.84
PDLIM2-217ENST00000491330 GJA5P36382 358 aa20.26■□□□□ 0.83
PDLIM2-217ENST00000491330 NAA16Q6N069 864 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-217ENST00000491330 RPAP2Q8IXW5 612 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-217ENST00000491330 MS4A4AQ96JQ5 239 aa20.26■□□□□ 0.83
PDLIM2-217ENST00000491330 ZNF512BQ96KM6 892 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-217ENST00000491330 FAM198AQ9UFP1 575 aa20.26■□□□□ 0.83
PDLIM2-217ENST00000491330 RCAN3Q9UKA8 241 aa20.26■□□□□ 0.83
PDLIM2-217ENST00000491330 HPS5Q9UPZ3 1129 aa20.26■□□□□ 0.83
PDLIM2-217ENST00000491330 TRIM17Q9Y577 477 aa20.26■□□□□ 0.83
PDLIM2-217ENST00000491330 NPM3O75607 178 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms