RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 PRKCZQ05513 592 aa19.35■□□□□ 0.69
SCAMP3-208ENST00000490999 METTL24Q5JXM2 366 aa19.35■□□□□ 0.69
SCAMP3-208ENST00000490999 NBPF7P0C2Y1 421 aaPredicted RBP19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 BCAMP50895 628 aa19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 HDLBPQ00341 1268 aaKnown RBP19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 PPATQ06203 517 aa19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 DCAF15Q66K64 600 aa19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 UBE2Q1Q7Z7E8 422 aa19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 ANKRD23Q86SG2 305 aa19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 FAM83AQ86UY5 434 aa19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 TBC1D22AQ8WUA7 517 aa19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 ZNF341Q9BYN7 854 aa19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 BICC1Q9H694 974 aaKnown RBP19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 BIN2Q9UBW5 565 aaPredicted RBP19.34■□□□□ 0.69
SCAMP3-208ENST00000490999 A0A0C4DFX4 3053 aa19.33■□□□□ 0.69
SCAMP3-208ENST00000490999 GJA8P48165 433 aa19.33■□□□□ 0.68
SCAMP3-208ENST00000490999 CAVIN4Q5BKX8 364 aa19.33■□□□□ 0.68
SCAMP3-208ENST00000490999 KLHDC4Q8TBB5 520 aa19.33■□□□□ 0.68
SCAMP3-208ENST00000490999 SRCIN1Q9C0H9 1055 aa19.33■□□□□ 0.68
SCAMP3-208ENST00000490999 RNF208Q9H0X6 261 aa19.33■□□□□ 0.68
SCAMP3-208ENST00000490999 ALDH1L1O75891 902 aa19.32■□□□□ 0.68
SCAMP3-208ENST00000490999 CYP2C8P10632 490 aa19.32■□□□□ 0.68
SCAMP3-208ENST00000490999 TCP10Q12799 353 aa19.32■□□□□ 0.68
SCAMP3-208ENST00000490999 MOGSQ13724 837 aa19.32■□□□□ 0.68
SCAMP3-208ENST00000490999 VGLL2Q8N8G2 317 aa19.32■□□□□ 0.68
SCAMP3-208ENST00000490999 HOOK2Q96ED9 719 aa19.32■□□□□ 0.68
SCAMP3-208ENST00000490999 PRO3102Q9H379 93 aa19.32■□□□□ 0.68
SCAMP3-208ENST00000490999 FARP2O94887 1054 aaPredicted RBP19.31■□□□□ 0.68
SCAMP3-208ENST00000490999 GJB1P08034 283 aa19.31■□□□□ 0.68
SCAMP3-208ENST00000490999 NFIAQ12857 509 aa19.31■□□□□ 0.68
SCAMP3-208ENST00000490999 ANKRD44Q8N8A2 993 aa19.31■□□□□ 0.68
SCAMP3-208ENST00000490999 NKX2-3Q8TAU0 364 aa19.31■□□□□ 0.68
SCAMP3-208ENST00000490999 HTATIP2Q9BUP3 242 aa19.31■□□□□ 0.68
SCAMP3-208ENST00000490999 UNC93B1Q9H1C4 597 aa19.31■□□□□ 0.68
SCAMP3-208ENST00000490999 KCNH4Q9UQ05 1017 aa19.31■□□□□ 0.68
SCAMP3-208ENST00000490999 MAST3O60307 1309 aa19.3■□□□□ 0.68
SCAMP3-208ENST00000490999 SOX1O00570 391 aaPredicted RBP19.3■□□□□ 0.68
SCAMP3-208ENST00000490999 DIXDC1Q155Q3 683 aa19.3■□□□□ 0.68
SCAMP3-208ENST00000490999 FKBP1CQ5VVH2 108 aa19.3■□□□□ 0.68
SCAMP3-208ENST00000490999 U2AF1L4Q8WU68 220 aaKnown RBP19.3■□□□□ 0.68
SCAMP3-208ENST00000490999 PARK7Q99497 189 aaKnown RBP19.3■□□□□ 0.68
SCAMP3-208ENST00000490999 GABRQQ9UN88 632 aa19.3■□□□□ 0.68
SCAMP3-208ENST00000490999 HOXD10P28358 340 aa19.29■□□□□ 0.68
SCAMP3-208ENST00000490999 CACNA1FO60840 1977 aa19.28■□□□□ 0.68
SCAMP3-208ENST00000490999 ZBTB7BO15156 539 aaPredicted RBP19.28■□□□□ 0.68
SCAMP3-208ENST00000490999 PDE8BO95263 885 aa19.28■□□□□ 0.68
SCAMP3-208ENST00000490999 BCRP11274 1271 aa19.28■□□□□ 0.68
SCAMP3-208ENST00000490999 ELNP15502 786 aa19.28■□□□□ 0.68
SCAMP3-208ENST00000490999 FCGRTP55899 365 aa19.28■□□□□ 0.68
SCAMP3-208ENST00000490999 UBXN2AP68543 259 aa19.28■□□□□ 0.68
SCAMP3-208ENST00000490999 DAGLAQ9Y4D2 1042 aa19.28■□□□□ 0.68
SCAMP3-208ENST00000490999 CUL9Q8IWT3 2517 aa19.27■□□□□ 0.68
SCAMP3-208ENST00000490999 DLL1O00548 723 aa19.27■□□□□ 0.68
SCAMP3-208ENST00000490999 RABL6Q3YEC7 729 aaPredicted RBP19.27■□□□□ 0.68
SCAMP3-208ENST00000490999 GPAT2Q6NUI2 795 aa19.27■□□□□ 0.68
SCAMP3-208ENST00000490999 CDC42EP5Q6NZY7 148 aa19.27■□□□□ 0.68
SCAMP3-208ENST00000490999 HHIPL2Q6UWX4 724 aa19.27■□□□□ 0.68
SCAMP3-208ENST00000490999 SLC17A8Q8NDX2 589 aa19.27■□□□□ 0.68
SCAMP3-208ENST00000490999 FAM151AQ8WW52 585 aa19.27■□□□□ 0.68
SCAMP3-208ENST00000490999 LRCH3Q96II8 777 aa19.27■□□□□ 0.68
SCAMP3-208ENST00000490999 ZNF112Q9UJU3 913 aa19.27■□□□□ 0.68
SCAMP3-208ENST00000490999 NR2E3Q9Y5X4 410 aa19.27■□□□□ 0.68
SCAMP3-208ENST00000490999 PUM3Q15397 648 aaKnown RBP19.26■□□□□ 0.67
SCAMP3-208ENST00000490999 WDR63Q8IWG1 891 aa19.26■□□□□ 0.67
SCAMP3-208ENST00000490999 SLAIN1Q8ND83 568 aa19.26■□□□□ 0.67
SCAMP3-208ENST00000490999 UTYO14607 1347 aa19.25■□□□□ 0.67
SCAMP3-208ENST00000490999 INHAP05111 366 aa19.25■□□□□ 0.67
SCAMP3-208ENST00000490999 PRDX5P30044 214 aa19.25■□□□□ 0.67
SCAMP3-208ENST00000490999 NOL9Q5SY16 702 aaKnown RBP19.25■□□□□ 0.67
SCAMP3-208ENST00000490999 ZFPM1Q8IX07 1006 aa19.25■□□□□ 0.67
SCAMP3-208ENST00000490999 FAM198AQ9UFP1 575 aa19.25■□□□□ 0.67
SCAMP3-208ENST00000490999 TAOK2Q9UL54 1235 aa19.25■□□□□ 0.67
SCAMP3-208ENST00000490999 SUGT1Q9Y2Z0 365 aa19.25■□□□□ 0.67
SCAMP3-208ENST00000490999 ATRNL1Q5VV63 1379 aa19.24■□□□□ 0.67
SCAMP3-208ENST00000490999 ADCY3O60266 1144 aa19.24■□□□□ 0.67
SCAMP3-208ENST00000490999 IFIT1P09914 478 aaKnown RBP19.24■□□□□ 0.67
SCAMP3-208ENST00000490999 SLURP2P0DP57 97 aa19.24■□□□□ 0.67
SCAMP3-208ENST00000490999 FGFR2P21802 821 aa19.24■□□□□ 0.67
SCAMP3-208ENST00000490999 ZEB1P37275 1124 aaPredicted RBP19.24■□□□□ 0.67
SCAMP3-208ENST00000490999 DEFB118Q96PH6 123 aa19.24■□□□□ 0.67
SCAMP3-208ENST00000490999 MRIQ9BWK5 157 aa19.24■□□□□ 0.67
SCAMP3-208ENST00000490999 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.24■□□□□ 0.67
SCAMP3-208ENST00000490999 EVI5O60447 810 aa19.23■□□□□ 0.67
SCAMP3-208ENST00000490999 FLT3LGP49771 235 aa19.23■□□□□ 0.67
SCAMP3-208ENST00000490999 GADL1Q6ZQY3 521 aa19.23■□□□□ 0.67
SCAMP3-208ENST00000490999 MRS2Q9HD23 443 aa19.23■□□□□ 0.67
SCAMP3-208ENST00000490999 STAP2Q9UGK3 403 aa19.23■□□□□ 0.67
SCAMP3-208ENST00000490999 KIF16BQ96L93 1317 aa19.23■□□□□ 0.67
SCAMP3-208ENST00000490999 SGPL1O95470 568 aa19.22■□□□□ 0.67
SCAMP3-208ENST00000490999 CCDC84Q86UT8 332 aaPredicted RBP19.22■□□□□ 0.67
SCAMP3-208ENST00000490999 DIS3LQ8TF46 1054 aaKnown RBP19.22■□□□□ 0.67
SCAMP3-208ENST00000490999 USP40Q9NVE5 1235 aa19.22■□□□□ 0.67
SCAMP3-208ENST00000490999 ZHX2Q9Y6X8 837 aa19.22■□□□□ 0.67
SCAMP3-208ENST00000490999 A0A0G2JLL6 359 aaPredicted RBP19.21■□□□□ 0.67
SCAMP3-208ENST00000490999 TNPO2O14787 897 aaKnown RBP19.21■□□□□ 0.67
SCAMP3-208ENST00000490999 SLC5A1P13866 664 aa19.21■□□□□ 0.67
SCAMP3-208ENST00000490999 NCBP3Q53F19 620 aaKnown RBP19.21■□□□□ 0.67
SCAMP3-208ENST00000490999 PRRT2Q7Z6L0 340 aaPredicted RBP19.21■□□□□ 0.67
SCAMP3-208ENST00000490999 WDR66Q8TBY9 1149 aa19.21■□□□□ 0.67
SCAMP3-208ENST00000490999 DOCK2Q92608 1830 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms