RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 CDC42EP5Q6NZY7 148 aa20.73■□□□□ 0.91
SRGAP3-209ENST00000490889 ERO1BQ86YB8 467 aa20.73■□□□□ 0.91
SRGAP3-209ENST00000490889 FBXO3Q9UK99 471 aa20.73■□□□□ 0.91
SRGAP3-209ENST00000490889 RBBP6Q7Z6E9 1792 aaKnown RBP20.72■□□□□ 0.91
SRGAP3-209ENST00000490889 INPP5BP32019 993 aa20.72■□□□□ 0.91
SRGAP3-209ENST00000490889 PHKA1P46020 1223 aa20.72■□□□□ 0.91
SRGAP3-209ENST00000490889 MEIS3Q99687 375 aa20.72■□□□□ 0.91
SRGAP3-209ENST00000490889 ZFYVE28Q9HCC9 887 aa20.72■□□□□ 0.91
SRGAP3-209ENST00000490889 CEP126Q9P2H0 1117 aa20.72■□□□□ 0.91
SRGAP3-209ENST00000490889 BTBD19C9JJ37 291 aa20.71■□□□□ 0.91
SRGAP3-209ENST00000490889 CT47B1P0C2W7 299 aaPredicted RBP20.71■□□□□ 0.91
SRGAP3-209ENST00000490889 ADORA1P30542 326 aa20.71■□□□□ 0.91
SRGAP3-209ENST00000490889 TCP10Q12799 353 aa20.71■□□□□ 0.91
SRGAP3-209ENST00000490889 FAM151AQ8WW52 585 aa20.71■□□□□ 0.91
SRGAP3-209ENST00000490889 ARMC5Q96C12 935 aa20.71■□□□□ 0.91
SRGAP3-209ENST00000490889 API5Q9BZZ5 524 aaKnown RBP20.71■□□□□ 0.91
SRGAP3-209ENST00000490889 IL15P40933 162 aaPredicted RBP20.7■□□□□ 0.9
SRGAP3-209ENST00000490889 PPIL2Q13356 520 aa20.7■□□□□ 0.9
SRGAP3-209ENST00000490889 DCAF15Q66K64 600 aa20.7■□□□□ 0.9
SRGAP3-209ENST00000490889 INTS3Q68E01 1043 aaKnown RBP20.7■□□□□ 0.9
SRGAP3-209ENST00000490889 HOOK2Q96ED9 719 aa20.7■□□□□ 0.9
SRGAP3-209ENST00000490889 ZNF341Q9BYN7 854 aa20.7■□□□□ 0.9
SRGAP3-209ENST00000490889 FAM198AQ9UFP1 575 aa20.7■□□□□ 0.9
SRGAP3-209ENST00000490889 CETPP11597 493 aa20.69■□□□□ 0.9
SRGAP3-209ENST00000490889 RARSP54136 660 aaKnown RBP20.69■□□□□ 0.9
SRGAP3-209ENST00000490889 ZFPM1Q8IX07 1006 aa20.69■□□□□ 0.9
SRGAP3-209ENST00000490889 ARHGAP39Q9C0H5 1083 aa20.69■□□□□ 0.9
SRGAP3-209ENST00000490889 COPRSQ9NQ92 184 aa20.69■□□□□ 0.9
SRGAP3-209ENST00000490889 SALL1Q9NSC2 1324 aa20.69■□□□□ 0.9
SRGAP3-209ENST00000490889 KIAA0100Q14667 2235 aaKnown RBP20.69■□□□□ 0.9
SRGAP3-209ENST00000490889 LDHBP07195 334 aaKnown RBP20.68■□□□□ 0.9
SRGAP3-209ENST00000490889 SNAPC2Q13487 334 aa20.68■□□□□ 0.9
SRGAP3-209ENST00000490889 ZNF112Q9UJU3 913 aa20.68■□□□□ 0.9
SRGAP3-209ENST00000490889 PTCH2Q9Y6C5 1203 aa20.68■□□□□ 0.9
SRGAP3-209ENST00000490889 TLR2O60603 784 aa20.67■□□□□ 0.9
SRGAP3-209ENST00000490889 PPATQ06203 517 aa20.67■□□□□ 0.9
SRGAP3-209ENST00000490889 CCDC102BQ68D86 513 aa20.67■□□□□ 0.9
SRGAP3-209ENST00000490889 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.67■□□□□ 0.9
SRGAP3-209ENST00000490889 ZCCHC17Q9NP64 241 aaKnown RBP20.67■□□□□ 0.9
SRGAP3-209ENST00000490889 USP40Q9NVE5 1235 aa20.67■□□□□ 0.9
SRGAP3-209ENST00000490889 GNL3LQ9NVN8 582 aaKnown RBP20.67■□□□□ 0.9
SRGAP3-209ENST00000490889 DENND2AQ9ULE3 1009 aa20.67■□□□□ 0.9
SRGAP3-209ENST00000490889 SEMA3EO15041 775 aa20.66■□□□□ 0.9
SRGAP3-209ENST00000490889 EN2P19622 333 aaPredicted RBP20.66■□□□□ 0.9
SRGAP3-209ENST00000490889 TIMM10P62072 90 aa20.66■□□□□ 0.9
SRGAP3-209ENST00000490889 ZNF333Q96JL9 665 aa20.66■□□□□ 0.9
SRGAP3-209ENST00000490889 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.66■□□□□ 0.9
SRGAP3-209ENST00000490889 ATRNL1Q5VV63 1379 aa20.66■□□□□ 0.9
SRGAP3-209ENST00000490889 AK9Q5TCS8 1911 aa20.66■□□□□ 0.9
SRGAP3-209ENST00000490889 MYH2Q9UKX2 1941 aa20.66■□□□□ 0.9
SRGAP3-209ENST00000490889 RFX7Q2KHR2 1363 aa20.65■□□□□ 0.9
SRGAP3-209ENST00000490889 ZBTB22O15209 634 aa20.65■□□□□ 0.9
SRGAP3-209ENST00000490889 RASGRF1Q13972 1273 aa20.65■□□□□ 0.9
SRGAP3-209ENST00000490889 TNNQ9UQP3 1299 aa20.65■□□□□ 0.9
SRGAP3-209ENST00000490889 DOCK2Q92608 1830 aa20.64■□□□□ 0.9
SRGAP3-209ENST00000490889 GAKO14976 1311 aa20.64■□□□□ 0.89
SRGAP3-209ENST00000490889 LACTBP83111 547 aaPredicted RBP20.64■□□□□ 0.89
SRGAP3-209ENST00000490889 MOGSQ13724 837 aa20.64■□□□□ 0.89
SRGAP3-209ENST00000490889 KCNH4Q9UQ05 1017 aa20.64■□□□□ 0.89
SRGAP3-209ENST00000490889 ECM2O94769 699 aaPredicted RBP20.63■□□□□ 0.89
SRGAP3-209ENST00000490889 SLURP2P0DP57 97 aa20.63■□□□□ 0.89
SRGAP3-209ENST00000490889 CTGFP29279 349 aa20.63■□□□□ 0.89
SRGAP3-209ENST00000490889 RGS3P49796 1198 aa20.63■□□□□ 0.89
SRGAP3-209ENST00000490889 NOL9Q5SY16 702 aaKnown RBP20.63■□□□□ 0.89
SRGAP3-209ENST00000490889 C17orf99Q6UX52 265 aa20.63■□□□□ 0.89
SRGAP3-209ENST00000490889 SH3BP5LQ7L8J4 393 aa20.63■□□□□ 0.89
SRGAP3-209ENST00000490889 ARHGAP45Q92619 1136 aa20.63■□□□□ 0.89
SRGAP3-209ENST00000490889 HDAC5Q9UQL6 1122 aa20.63■□□□□ 0.89
SRGAP3-209ENST00000490889 ADGRA2Q96PE1 1338 aa20.62■□□□□ 0.89
SRGAP3-209ENST00000490889 A0A1B0GUL7 405 aa20.62■□□□□ 0.89
SRGAP3-209ENST00000490889 CCER2I3L3R5 266 aa20.62■□□□□ 0.89
SRGAP3-209ENST00000490889 SRGAP3O43295 1099 aa20.62■□□□□ 0.89
SRGAP3-209ENST00000490889 TFCP2Q12800 502 aa20.62■□□□□ 0.89
SRGAP3-209ENST00000490889 MTX1Q13505 466 aa20.62■□□□□ 0.89
SRGAP3-209ENST00000490889 ARHGEF6Q15052 776 aa20.62■□□□□ 0.89
SRGAP3-209ENST00000490889 SLC9C1Q4G0N8 1177 aa20.62■□□□□ 0.89
SRGAP3-209ENST00000490889 ANKRD23Q86SG2 305 aa20.62■□□□□ 0.89
SRGAP3-209ENST00000490889 IDI2Q9BXS1 227 aa20.62■□□□□ 0.89
SRGAP3-209ENST00000490889 CPA4Q9UI42 421 aa20.62■□□□□ 0.89
SRGAP3-209ENST00000490889 PHF20L1A8MW92 1017 aa20.61■□□□□ 0.89
SRGAP3-209ENST00000490889 PDHXO00330 501 aa20.61■□□□□ 0.89
SRGAP3-209ENST00000490889 WDHD1O75717 1129 aaPredicted RBP20.61■□□□□ 0.89
SRGAP3-209ENST00000490889 SH3TC2Q8TF17 1288 aa20.61■□□□□ 0.89
SRGAP3-209ENST00000490889 XAGE2Q96GT9 111 aa20.61■□□□□ 0.89
SRGAP3-209ENST00000490889 DDX4Q9NQI0 724 aaKnown RBP20.61■□□□□ 0.89
SRGAP3-209ENST00000490889 ABCF2Q9UG63 623 aa20.61■□□□□ 0.89
SRGAP3-209ENST00000490889 PDS5AQ29RF7 1337 aaKnown RBP20.6■□□□□ 0.89
SRGAP3-209ENST00000490889 ENTPD3O75355 529 aa20.6■□□□□ 0.89
SRGAP3-209ENST00000490889 MYCP01106 439 aaPredicted RBP20.6■□□□□ 0.89
SRGAP3-209ENST00000490889 GNAI3P08754 354 aa20.6■□□□□ 0.89
SRGAP3-209ENST00000490889 DZIP1Q86YF9 867 aaKnown RBP20.6■□□□□ 0.89
SRGAP3-209ENST00000490889 ZGPATQ8N5A5 531 aaKnown RBP20.6■□□□□ 0.89
SRGAP3-209ENST00000490889 ZNF384Q8TF68 577 aa20.6■□□□□ 0.89
SRGAP3-209ENST00000490889 DDTLA6NHG4 134 aaPredicted RBP20.59■□□□□ 0.89
SRGAP3-209ENST00000490889 TRIM27P14373 513 aa20.59■□□□□ 0.89
SRGAP3-209ENST00000490889 KIF22Q14807 665 aa20.59■□□□□ 0.89
SRGAP3-209ENST00000490889 GPAT2Q6NUI2 795 aa20.59■□□□□ 0.89
SRGAP3-209ENST00000490889 BTDP43251 543 aa20.58■□□□□ 0.89
SRGAP3-209ENST00000490889 PI16Q6UXB8 463 aa20.58■□□□□ 0.89
SRGAP3-209ENST00000490889 NBPF11Q86T75 865 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms