RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-210ENST00000490808 VIL1P09327 827 aaKnown RBP12.17□□□□□ -0.46
HDAC3-210ENST00000490808 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
HDAC3-210ENST00000490808 CXCL9Q07325 125 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 CUL4AQ13619 759 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 SPTY2D1Q68D10 685 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-210ENST00000490808 USP17L1Q7RTZ2 530 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 FBXO33Q7Z6M2 555 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-210ENST00000490808 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 ZGPATQ8N5A5 531 aaKnown RBP12.17□□□□□ -0.46
HDAC3-210ENST00000490808 AIDAQ96BJ3 306 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 UPF3BQ9BZI7 483 aaKnown RBP12.17□□□□□ -0.46
HDAC3-210ENST00000490808 CD209Q9NNX6 404 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 SUGT1Q9Y2Z0 365 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 RPAP1Q9BWH6 1393 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-210ENST00000490808 MAST3O60307 1309 aa12.16□□□□□ -0.46
HDAC3-210ENST00000490808 BCAMP50895 628 aa12.16□□□□□ -0.46
HDAC3-210ENST00000490808 FGD1P98174 961 aa12.16□□□□□ -0.46
HDAC3-210ENST00000490808 SCARF1Q14162 830 aa12.16□□□□□ -0.46
HDAC3-210ENST00000490808 FAM84BQ96KN1 310 aaPredicted RBP12.16□□□□□ -0.46
HDAC3-210ENST00000490808 TTC14Q96N46 770 aa12.16□□□□□ -0.46
HDAC3-210ENST00000490808 NACAP1Q9BZK3 213 aa12.16□□□□□ -0.46
HDAC3-210ENST00000490808 DBNDD1Q9H9R9 158 aa12.16□□□□□ -0.46
HDAC3-210ENST00000490808 PRDM10Q9NQV6 1147 aa12.16□□□□□ -0.46
HDAC3-210ENST00000490808 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
HDAC3-210ENST00000490808 COL4A5P29400 1685 aa12.16□□□□□ -0.46
HDAC3-210ENST00000490808 DOCK2Q92608 1830 aa12.16□□□□□ -0.46
HDAC3-210ENST00000490808 FAM205AQ6ZU69 1335 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 DDX11L8A8MPP1 907 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 YDJCA8MPS7 323 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 ZNF213O14771 459 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 RPS6KB1P23443 525 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 DDIT3P35638 169 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 AK2P54819 239 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 TRDNQ13061 729 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 RASGRF1Q13972 1273 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 RAB3GAP1Q15042 981 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 TTLL5Q6EMB2 1281 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 TDRD7Q8NHU6 1098 aaKnown RBP12.15□□□□□ -0.46
HDAC3-210ENST00000490808 OSBP2Q969R2 916 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 SEC62Q99442 399 aaKnown RBP12.15□□□□□ -0.46
HDAC3-210ENST00000490808 HACL1Q9UJ83 578 aa12.15□□□□□ -0.46
HDAC3-210ENST00000490808 ZNF541Q9H0D2 1346 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 ZNF532Q9HCE3 1301 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 H7C1D1 291 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 GPAA1O43292 621 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 APPP05067 770 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 PDE6AP16499 860 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 DOK7Q18PE1 504 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 RSBN1LQ6PCB5 846 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-210ENST00000490808 CCDC129Q6ZRS4 1044 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-210ENST00000490808 OGFOD1Q8N543 542 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 HDAC9Q9UKV0 1011 aa12.14□□□□□ -0.47
HDAC3-210ENST00000490808 ZNF646O15015 1829 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-210ENST00000490808 ZMYM6O95789 1325 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 POTECB2RU33 542 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 M0R2C6 588 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 PSMD14O00487 310 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 DDNO94850 711 aaPredicted RBP12.13□□□□□ -0.47
HDAC3-210ENST00000490808 CYP21A2P08686 494 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 ALX1Q15699 326 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 ADCK5Q3MIX3 580 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 PI16Q6UXB8 463 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 DHX32Q7L7V1 743 aaKnown RBP12.13□□□□□ -0.47
HDAC3-210ENST00000490808 RALYLQ86SE5 291 aaKnown RBP12.13□□□□□ -0.47
HDAC3-210ENST00000490808 TXNRD3Q86VQ6 643 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 MAGEB6Q8N7X4 407 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 ZC3H15Q8WU90 426 aaKnown RBP12.13□□□□□ -0.47
HDAC3-210ENST00000490808 PIH1D3Q9NQM4 214 aaKnown RBP12.13□□□□□ -0.47
HDAC3-210ENST00000490808 ADARB2Q9NS39 739 aaKnown RBP12.13□□□□□ -0.47
HDAC3-210ENST00000490808 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 RAI14Q9P0K7 980 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 SMC3Q9UQE7 1217 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 KIF3AQ9Y496 699 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 GJA3Q9Y6H8 435 aa12.13□□□□□ -0.47
HDAC3-210ENST00000490808 PATL2C9JE40 543 aaKnown RBP12.12□□□□□ -0.47
HDAC3-210ENST00000490808 RAD17O75943 681 aa12.12□□□□□ -0.47
HDAC3-210ENST00000490808 GYG1P46976 350 aa12.12□□□□□ -0.47
HDAC3-210ENST00000490808 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
HDAC3-210ENST00000490808 HDLBPQ00341 1268 aaKnown RBP12.12□□□□□ -0.47
HDAC3-210ENST00000490808 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
HDAC3-210ENST00000490808 DACT2Q5SW24 774 aa12.12□□□□□ -0.47
HDAC3-210ENST00000490808 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
HDAC3-210ENST00000490808 NOL8Q76FK4 1167 aaKnown RBP12.12□□□□□ -0.47
HDAC3-210ENST00000490808 SLC51AQ86UW1 340 aa12.12□□□□□ -0.47
HDAC3-210ENST00000490808 CERS3Q8IU89 383 aa12.12□□□□□ -0.47
HDAC3-210ENST00000490808 NCOA7Q8NI08 942 aa12.12□□□□□ -0.47
HDAC3-210ENST00000490808 MRIQ9BWK5 157 aa12.12□□□□□ -0.47
HDAC3-210ENST00000490808 PUS7LQ9H0K6 701 aaKnown RBP12.12□□□□□ -0.47
HDAC3-210ENST00000490808 ABCF2Q9UG63 623 aa12.12□□□□□ -0.47
HDAC3-210ENST00000490808 WDR19Q8NEZ3 1342 aa12.11□□□□□ -0.47
HDAC3-210ENST00000490808 SALL1Q9NSC2 1324 aa12.11□□□□□ -0.47
HDAC3-210ENST00000490808 FGAP02671 866 aa12.11□□□□□ -0.47
HDAC3-210ENST00000490808 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
HDAC3-210ENST00000490808 PDCP20941 246 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms