RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CHMP4BQ9H444 224 aaKnown RBP9.42□□□□□ -0.9
CLDN1-202ENST00000490800 ASTN2O75129 1339 aaPredicted RBP9.41□□□□□ -0.9
CLDN1-202ENST00000490800 USP17L3A6NCW0 530 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 USP17L4A6NCW7 530 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 ADM5C9JUS6 153 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 HSPA8P11142 646 aaKnown RBP9.41□□□□□ -0.9
CLDN1-202ENST00000490800 MAP2K2P36507 400 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 SCARF1Q14162 830 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 KIF4BQ2VIQ3 1234 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 BEND3Q5T5X7 828 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 CENPQQ7L2Z9 268 aaPredicted RBP9.41□□□□□ -0.9
CLDN1-202ENST00000490800 USP17L1Q7RTZ2 530 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 TXNRD3Q86VQ6 643 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 GMLQ99445 158 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 MPHOSPH8Q99549 860 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 MEIS3Q99687 375 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 LEMD3Q9Y2U8 911 aa9.41□□□□□ -0.9
CLDN1-202ENST00000490800 ANKRD18BA2A2Z9 1011 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 ARHGAP33O14559 1287 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 USP17L8P0C7I0 530 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 DNAJB2P25686 324 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 HUNKP57058 714 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 ZNF280AP59817 542 aaPredicted RBP9.4□□□□□ -0.9
CLDN1-202ENST00000490800 FOXO4P98177 505 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 HHIPL1Q96JK4 782 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 ZBED2Q9BTP6 218 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 MXD3Q9BW11 206 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 ANKRD2Q9GZV1 360 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 C1orf115Q9H7X2 142 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 KIAA1468Q9P260 1216 aa9.4□□□□□ -0.9
CLDN1-202ENST00000490800 ZNF804BA4D1E1 1349 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 SNAP23O00161 211 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 TAF5LO75529 589 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 KLRK1P26718 216 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 CHRNDQ07001 517 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 HDAC1Q13547 482 aaPredicted RBP9.39□□□□□ -0.91
CLDN1-202ENST00000490800 EPHA10Q5JZY3 1008 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 ANGEL2Q5VTE6 544 aaKnown RBP9.39□□□□□ -0.91
CLDN1-202ENST00000490800 POTEEQ6S8J3 1075 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 SULF1Q8IWU6 871 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 C2orf69Q8N8R5 385 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 HELBQ8NG08 1087 aaPredicted RBP9.39□□□□□ -0.91
CLDN1-202ENST00000490800 ZIC5Q96T25 663 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 SRCIN1Q9C0H9 1055 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 COA1Q9GZY4 146 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 RWDD1Q9H446 243 aaPredicted RBP9.39□□□□□ -0.91
CLDN1-202ENST00000490800 GBA2Q9HCG7 927 aaPredicted RBP9.39□□□□□ -0.91
CLDN1-202ENST00000490800 MYOZ2Q9NPC6 264 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 GGA3Q9NZ52 723 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 SCAF8Q9UPN6 1271 aaKnown RBP9.39□□□□□ -0.91
CLDN1-202ENST00000490800 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
CLDN1-202ENST00000490800 MED23Q9ULK4 1368 aa9.38□□□□□ -0.91
CLDN1-202ENST00000490800 ALDH1L1O75891 902 aa9.38□□□□□ -0.91
CLDN1-202ENST00000490800 IFIT5Q13325 482 aaKnown RBP9.38□□□□□ -0.91
CLDN1-202ENST00000490800 NBPF9Q3BBW0 867 aa9.38□□□□□ -0.91
CLDN1-202ENST00000490800 DACT2Q5SW24 774 aa9.38□□□□□ -0.91
CLDN1-202ENST00000490800 STRIP1Q5VSL9 837 aa9.38□□□□□ -0.91
CLDN1-202ENST00000490800 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
CLDN1-202ENST00000490800 TTLL5Q6EMB2 1281 aa9.38□□□□□ -0.91
CLDN1-202ENST00000490800 RGMBQ6NW40 437 aa9.38□□□□□ -0.91
CLDN1-202ENST00000490800 LMBR1LQ6UX01 489 aa9.38□□□□□ -0.91
CLDN1-202ENST00000490800 SIRT2Q8IXJ6 389 aa9.38□□□□□ -0.91
CLDN1-202ENST00000490800 ZNF594Q96JF6 807 aaPredicted RBP9.38□□□□□ -0.91
CLDN1-202ENST00000490800 USP44Q9H0E7 712 aa9.38□□□□□ -0.91
CLDN1-202ENST00000490800 C9orf78Q9NZ63 289 aaPredicted RBP9.38□□□□□ -0.91
CLDN1-202ENST00000490800 GNAI3P08754 354 aa9.37□□□□□ -0.91
CLDN1-202ENST00000490800 KCNJ4P48050 445 aa9.37□□□□□ -0.91
CLDN1-202ENST00000490800 ZNF157P51786 506 aaPredicted RBP9.37□□□□□ -0.91
CLDN1-202ENST00000490800 GTF2IP78347 998 aa9.37□□□□□ -0.91
CLDN1-202ENST00000490800 ERICH6Q7L0X2 663 aa9.37□□□□□ -0.91
CLDN1-202ENST00000490800 OGFOD1Q8N543 542 aa9.37□□□□□ -0.91
CLDN1-202ENST00000490800 CDCA5Q96FF9 252 aa9.37□□□□□ -0.91
CLDN1-202ENST00000490800 SEPT9Q9UHD8 586 aaPredicted RBP9.37□□□□□ -0.91
CLDN1-202ENST00000490800 SCN9AQ15858 1988 aa9.37□□□□□ -0.91
CLDN1-202ENST00000490800 TRPM7Q96QT4 1865 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 DDX11L8A8MPP1 907 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 FAM155AB1AL88 458 aaPredicted RBP9.36□□□□□ -0.91
CLDN1-202ENST00000490800 GRM8O00222 908 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 GNAI2P04899 355 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 PBX2P40425 430 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 KIF23Q02241 960 aaPredicted RBP9.36□□□□□ -0.91
CLDN1-202ENST00000490800 NOGQ13253 232 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 CCDC57Q2TAC2 916 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 SH3D19Q5HYK7 790 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 PRAMEF18Q5VWM3 479 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 CEP85Q6P2H3 762 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 KIAA0825Q8IV33 1275 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 ANKRD44Q8N8A2 993 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 PCMTD1Q96MG8 357 aaPredicted RBP9.36□□□□□ -0.91
CLDN1-202ENST00000490800 TMEM134Q9H6X4 195 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 CD209Q9NNX6 404 aa9.36□□□□□ -0.91
CLDN1-202ENST00000490800 MYO3BQ8WXR4 1341 aa9.35□□□□□ -0.91
CLDN1-202ENST00000490800 WNT10BO00744 389 aa9.35□□□□□ -0.91
CLDN1-202ENST00000490800 ZNF609O15014 1411 aa9.35□□□□□ -0.91
CLDN1-202ENST00000490800 NBPF7P0C2Y1 421 aaPredicted RBP9.35□□□□□ -0.91
CLDN1-202ENST00000490800 UBTFL1P0CB47 393 aaPredicted RBP9.35□□□□□ -0.91
CLDN1-202ENST00000490800 TAF7LQ5H9L4 462 aa9.35□□□□□ -0.91
CLDN1-202ENST00000490800 LDHAL6AQ6ZMR3 332 aa9.35□□□□□ -0.91
CLDN1-202ENST00000490800 SKAP1Q86WV1 359 aa9.35□□□□□ -0.91
CLDN1-202ENST00000490800 RPAP2Q8IXW5 612 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms