RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 NOL9Q5SY16 702 aaKnown RBP11.34□□□□□ -0.59
SUPT20H-220ENST00000490716 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
SUPT20H-220ENST00000490716 SMC5Q8IY18 1101 aa11.34□□□□□ -0.59
SUPT20H-220ENST00000490716 DCPSQ96C86 337 aaKnown RBP11.34□□□□□ -0.59
SUPT20H-220ENST00000490716 SCAF8Q9UPN6 1271 aaKnown RBP11.34□□□□□ -0.59
SUPT20H-220ENST00000490716 SURF6O75683 361 aaKnown RBP11.34□□□□□ -0.59
SUPT20H-220ENST00000490716 ATP5JP18859 108 aa11.34□□□□□ -0.59
SUPT20H-220ENST00000490716 KIF1BPQ96EK5 621 aa11.34□□□□□ -0.59
SUPT20H-220ENST00000490716 CRBNQ96SW2 442 aa11.34□□□□□ -0.59
SUPT20H-220ENST00000490716 TDRD3Q9H7E2 651 aaKnown RBP11.34□□□□□ -0.59
SUPT20H-220ENST00000490716 GBA2Q9HCG7 927 aaPredicted RBP11.34□□□□□ -0.59
SUPT20H-220ENST00000490716 TBC1D12O60347 775 aa11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 NFIAQ12857 509 aa11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 HDAC9Q9UKV0 1011 aa11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 G3BP1Q13283 466 aaKnown RBP eCLIP11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 DLGAP5Q15398 846 aa11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 TEKT1Q969V4 418 aa11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 HAUS7Q99871 368 aa11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 NOM1Q5C9Z4 860 aaKnown RBP11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 NBPF12Q5TAG4 269 aaPredicted RBP11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 ADGRA2Q96PE1 1338 aa11.33□□□□□ -0.6
SUPT20H-220ENST00000490716 DEFB115Q30KQ5 88 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 OGFOD1Q8N543 542 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 ANTXR1Q9H6X2 564 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 ZNF236Q9UL36 1845 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 ZAP70P43403 619 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 MOB2Q70IA6 237 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 FAM151AQ8WW52 585 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 FOXP2O15409 715 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 ENTPD3O75355 529 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 RASA3Q14644 834 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 CHMP4BQ9H444 224 aaKnown RBP11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 DNAJC18Q9H819 358 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 SAGE1Q9NXZ1 904 aa11.32□□□□□ -0.6
SUPT20H-220ENST00000490716 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
SUPT20H-220ENST00000490716 CAPNS2Q96L46 248 aa11.31□□□□□ -0.6
SUPT20H-220ENST00000490716 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
SUPT20H-220ENST00000490716 IGHDP01880 384 aa11.31□□□□□ -0.6
SUPT20H-220ENST00000490716 RRP1BQ14684 758 aaKnown RBP11.31□□□□□ -0.6
SUPT20H-220ENST00000490716 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
SUPT20H-220ENST00000490716 RGMBQ6NW40 437 aa11.31□□□□□ -0.6
SUPT20H-220ENST00000490716 PRAMEF18Q5VWM3 479 aa11.31□□□□□ -0.6
SUPT20H-220ENST00000490716 TBC1D9Q6ZT07 1266 aa11.31□□□□□ -0.6
SUPT20H-220ENST00000490716 SNCAIPQ9Y6H5 919 aa11.31□□□□□ -0.6
SUPT20H-220ENST00000490716 FRMPD3Q5JV73 1810 aa11.31□□□□□ -0.6
SUPT20H-220ENST00000490716 COL11A1P12107 1806 aaPredicted RBP11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 LDHBP07195 334 aaKnown RBP11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 SULF1Q8IWU6 871 aa11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 OSBPL3Q9H4L5 887 aa11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 MYH4Q9Y623 1939 aa11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 AOC2O75106 756 aa11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 CSRNP1Q96S65 589 aa11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 CCDC8Q9H0W5 538 aaPredicted RBP11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 FZD1Q9UP38 647 aa11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 CASP8AP2Q9UKL3 1982 aa11.3□□□□□ -0.6
SUPT20H-220ENST00000490716 HSPA8P11142 646 aaKnown RBP11.29□□□□□ -0.6
SUPT20H-220ENST00000490716 GNL3LQ9NVN8 582 aaKnown RBP11.29□□□□□ -0.6
SUPT20H-220ENST00000490716 DDTLA6NHG4 134 aaPredicted RBP11.29□□□□□ -0.6
SUPT20H-220ENST00000490716 TICAM2Q86XR7 235 aa11.29□□□□□ -0.6
SUPT20H-220ENST00000490716 ROBO3Q96MS0 1386 aa11.29□□□□□ -0.6
SUPT20H-220ENST00000490716 CLRN2A0PK11 232 aa11.29□□□□□ -0.6
SUPT20H-220ENST00000490716 F8W031 263 aaPredicted RBP11.29□□□□□ -0.6
SUPT20H-220ENST00000490716 FOXN1O15353 648 aa11.29□□□□□ -0.6
SUPT20H-220ENST00000490716 CAP1Q01518 475 aa11.29□□□□□ -0.6
SUPT20H-220ENST00000490716 GABPAQ06546 454 aa11.29□□□□□ -0.6
SUPT20H-220ENST00000490716 PTPN18Q99952 460 aa11.29□□□□□ -0.6
SUPT20H-220ENST00000490716 MKI67P46013 3256 aaKnown RBP11.28□□□□□ -0.6
SUPT20H-220ENST00000490716 ZBTB48P10074 688 aaPredicted RBP11.28□□□□□ -0.6
SUPT20H-220ENST00000490716 SPRYD7Q5W111 196 aa11.28□□□□□ -0.6
SUPT20H-220ENST00000490716 KCNH4Q9UQ05 1017 aa11.28□□□□□ -0.6
SUPT20H-220ENST00000490716 LCTP09848 1927 aa11.28□□□□□ -0.6
SUPT20H-220ENST00000490716 CHGBP05060 677 aa11.28□□□□□ -0.6
SUPT20H-220ENST00000490716 JAG1P78504 1218 aa11.28□□□□□ -0.6
SUPT20H-220ENST00000490716 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
SUPT20H-220ENST00000490716 G3V3G9 751 aa11.27□□□□□ -0.6
SUPT20H-220ENST00000490716 CACNB3P54284 484 aa11.27□□□□□ -0.6
SUPT20H-220ENST00000490716 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.6
SUPT20H-220ENST00000490716 SPTY2D1Q68D10 685 aaPredicted RBP11.27□□□□□ -0.6
SUPT20H-220ENST00000490716 OTUD7AQ8TE49 926 aaPredicted RBP11.27□□□□□ -0.6
SUPT20H-220ENST00000490716 CLMNQ96JQ2 1002 aa11.27□□□□□ -0.6
SUPT20H-220ENST00000490716 LRRCC1Q9C099 1032 aa11.27□□□□□ -0.6
SUPT20H-220ENST00000490716 IL1RAPL2Q9NP60 686 aa11.27□□□□□ -0.6
SUPT20H-220ENST00000490716 NDUFB9Q9Y6M9 179 aa11.27□□□□□ -0.6
SUPT20H-220ENST00000490716 TTC41PQ6P2S7 1318 aa11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 BTDP43251 543 aa11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 CHAF1AQ13111 956 aaPredicted RBP11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 TATDN1Q6P1N9 297 aa11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 AACSQ86V21 672 aa11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 SH3RF3Q8TEJ3 882 aaPredicted RBP11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 PRDM10Q9NQV6 1147 aa11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 HMMRO75330 724 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms