RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 ELL2O00472 640 aaPredicted RBP11.63□□□□□ -0.55
SRRM1-217ENST00000490543 ATP2B4P23634 1241 aa11.63□□□□□ -0.55
SRRM1-217ENST00000490543 HABP4Q5JVS0 413 aaKnown RBP11.63□□□□□ -0.55
SRRM1-217ENST00000490543 TXNRD3Q86VQ6 643 aa11.63□□□□□ -0.55
SRRM1-217ENST00000490543 CCDC191Q8NCU4 936 aa11.63□□□□□ -0.55
SRRM1-217ENST00000490543 CFHR5Q9BXR6 569 aa11.63□□□□□ -0.55
SRRM1-217ENST00000490543 PRKD2Q9BZL6 878 aa11.63□□□□□ -0.55
SRRM1-217ENST00000490543 MBIPQ9NS73 344 aa11.63□□□□□ -0.55
SRRM1-217ENST00000490543 MINPP1Q9UNW1 487 aa11.63□□□□□ -0.55
SRRM1-217ENST00000490543 HSP90B1P14625 803 aaKnown RBP11.62□□□□□ -0.55
SRRM1-217ENST00000490543 NF2P35240 595 aa11.62□□□□□ -0.55
SRRM1-217ENST00000490543 GCGRP47871 477 aa11.62□□□□□ -0.55
SRRM1-217ENST00000490543 SREBF2Q12772 1141 aa11.62□□□□□ -0.55
SRRM1-217ENST00000490543 LDLRAD1Q5T700 205 aa11.62□□□□□ -0.55
SRRM1-217ENST00000490543 SPRYD7Q5W111 196 aa11.62□□□□□ -0.55
SRRM1-217ENST00000490543 SCUBE3Q8IX30 993 aa11.62□□□□□ -0.55
SRRM1-217ENST00000490543 OGFOD1Q8N543 542 aa11.62□□□□□ -0.55
SRRM1-217ENST00000490543 TMUB1Q9BVT8 246 aa11.62□□□□□ -0.55
SRRM1-217ENST00000490543 CWC25Q9NXE8 425 aaPredicted RBP11.62□□□□□ -0.55
SRRM1-217ENST00000490543 FUT2Q10981 343 aa11.61□□□□□ -0.55
SRRM1-217ENST00000490543 STRIP1Q5VSL9 837 aa11.61□□□□□ -0.55
SRRM1-217ENST00000490543 ARMC9Q7Z3E5 817 aa11.61□□□□□ -0.55
SRRM1-217ENST00000490543 RUNDC1Q96C34 613 aa11.61□□□□□ -0.55
SRRM1-217ENST00000490543 ANGEL1Q9UNK9 670 aaKnown RBP11.61□□□□□ -0.55
SRRM1-217ENST00000490543 TRIM17Q9Y577 477 aa11.61□□□□□ -0.55
SRRM1-217ENST00000490543 MED23Q9ULK4 1368 aa11.6□□□□□ -0.55
SRRM1-217ENST00000490543 ZNF853P0CG23 659 aa11.6□□□□□ -0.55
SRRM1-217ENST00000490543 KLRK1P26718 216 aa11.6□□□□□ -0.55
SRRM1-217ENST00000490543 CCT4P50991 539 aaKnown RBP11.6□□□□□ -0.55
SRRM1-217ENST00000490543 MDM2Q00987 491 aaPredicted RBP11.6□□□□□ -0.55
SRRM1-217ENST00000490543 OTOP1Q7RTM1 612 aa11.6□□□□□ -0.55
SRRM1-217ENST00000490543 KIAA0825Q8IV33 1275 aa11.6□□□□□ -0.55
SRRM1-217ENST00000490543 TTLL11Q8NHH1 800 aa11.6□□□□□ -0.55
SRRM1-217ENST00000490543 GCC1Q96CN9 775 aa11.6□□□□□ -0.55
SRRM1-217ENST00000490543 ZBED3Q96IU2 234 aaPredicted RBP11.6□□□□□ -0.55
SRRM1-217ENST00000490543 CLMNQ96JQ2 1002 aa11.6□□□□□ -0.55
SRRM1-217ENST00000490543 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
SRRM1-217ENST00000490543 GREM2Q9H772 168 aa11.6□□□□□ -0.55
SRRM1-217ENST00000490543 BSDC1Q9NW68 430 aaPredicted RBP11.6□□□□□ -0.55
SRRM1-217ENST00000490543 ZNF646O15015 1829 aaPredicted RBP11.6□□□□□ -0.55
SRRM1-217ENST00000490543 IGF2BP3O00425 579 aaKnown RBP eCLIP11.59□□□□□ -0.55
SRRM1-217ENST00000490543 ADH1BP00325 375 aa11.59□□□□□ -0.55
SRRM1-217ENST00000490543 CTSWP56202 376 aa11.59□□□□□ -0.55
SRRM1-217ENST00000490543 CAP1Q01518 475 aa11.59□□□□□ -0.55
SRRM1-217ENST00000490543 RALBP1Q15311 655 aa11.59□□□□□ -0.55
SRRM1-217ENST00000490543 MORN1Q5T089 497 aa11.59□□□□□ -0.55
SRRM1-217ENST00000490543 TTLL5Q6EMB2 1281 aa11.59□□□□□ -0.55
SRRM1-217ENST00000490543 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
SRRM1-217ENST00000490543 CDC5LQ99459 802 aaKnown RBP11.59□□□□□ -0.55
SRRM1-217ENST00000490543 COA1Q9GZY4 146 aa11.59□□□□□ -0.55
SRRM1-217ENST00000490543 ADAMTS8Q9UP79 889 aa11.59□□□□□ -0.55
SRRM1-217ENST00000490543 PCDHAC2Q9Y5I4 1007 aa11.59□□□□□ -0.55
SRRM1-217ENST00000490543 MKI67P46013 3256 aaKnown RBP11.59□□□□□ -0.55
SRRM1-217ENST00000490543 HTTP42858 3142 aa11.59□□□□□ -0.55
SRRM1-217ENST00000490543 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
SRRM1-217ENST00000490543 S1PR4O95977 384 aa11.58□□□□□ -0.56
SRRM1-217ENST00000490543 ALDH1A1P00352 501 aa11.58□□□□□ -0.56
SRRM1-217ENST00000490543 IGKV5-2P06315 115 aa11.58□□□□□ -0.56
SRRM1-217ENST00000490543 GTF2IP78347 998 aa11.58□□□□□ -0.56
SRRM1-217ENST00000490543 APOBEC3FQ8IUX4 373 aaKnown RBP11.58□□□□□ -0.56
SRRM1-217ENST00000490543 C8orf58Q8NAV2 365 aa11.58□□□□□ -0.56
SRRM1-217ENST00000490543 DEFB129Q9H1M3 183 aa11.58□□□□□ -0.56
SRRM1-217ENST00000490543 MAP3K2Q9Y2U5 619 aa11.58□□□□□ -0.56
SRRM1-217ENST00000490543 V9GY48 417 aaPredicted RBP11.58□□□□□ -0.56
SRRM1-217ENST00000490543 MYO3BQ8WXR4 1341 aa11.58□□□□□ -0.56
SRRM1-217ENST00000490543 CEP290O15078 2479 aa11.57□□□□□ -0.56
SRRM1-217ENST00000490543 MANSC4A6NHS7 340 aaPredicted RBP11.57□□□□□ -0.56
SRRM1-217ENST00000490543 CD46P15529 392 aa11.57□□□□□ -0.56
SRRM1-217ENST00000490543 EN2P19622 333 aaPredicted RBP11.57□□□□□ -0.56
SRRM1-217ENST00000490543 INTS3Q68E01 1043 aaKnown RBP11.57□□□□□ -0.56
SRRM1-217ENST00000490543 CD99L2Q8TCZ2 262 aa11.57□□□□□ -0.56
SRRM1-217ENST00000490543 WNK4Q96J92 1243 aa11.57□□□□□ -0.56
SRRM1-217ENST00000490543 PTPN22Q9Y2R2 807 aa11.57□□□□□ -0.56
SRRM1-217ENST00000490543 SSC5DA1L4H1 1573 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 PI4KAP2A4QPH2 592 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 SNAP23O00161 211 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 GJA5P36382 358 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 FXR1P51114 621 aaKnown RBP eCLIP11.56□□□□□ -0.56
SRRM1-217ENST00000490543 INHBEP58166 350 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 MAP3K11Q16584 847 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 CWF19L2Q2TBE0 894 aaKnown RBP11.56□□□□□ -0.56
SRRM1-217ENST00000490543 CERS5Q8N5B7 392 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 PI4KAP1Q8N8J0 262 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 LEMD3Q9Y2U8 911 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 ZNF804BA4D1E1 1349 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 AOX1Q06278 1338 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 SPEF2Q9C093 1822 aa11.56□□□□□ -0.56
SRRM1-217ENST00000490543 ZMYND10O75800 440 aa11.55□□□□□ -0.56
SRRM1-217ENST00000490543 ZBTB48P10074 688 aaPredicted RBP11.55□□□□□ -0.56
SRRM1-217ENST00000490543 CRHR2Q13324 411 aa11.55□□□□□ -0.56
SRRM1-217ENST00000490543 WDR43Q15061 677 aaKnown RBP eCLIP11.55□□□□□ -0.56
SRRM1-217ENST00000490543 DLGAP5Q15398 846 aa11.55□□□□□ -0.56
SRRM1-217ENST00000490543 KSR2Q6VAB6 950 aa11.55□□□□□ -0.56
SRRM1-217ENST00000490543 TSPYL6Q8N831 410 aa11.55□□□□□ -0.56
SRRM1-217ENST00000490543 PTPN18Q99952 460 aa11.55□□□□□ -0.56
SRRM1-217ENST00000490543 TRIOBPQ9H2D6 2365 aa11.55□□□□□ -0.56
SRRM1-217ENST00000490543 CENPFP49454 3210 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 CLRN2A0PK11 232 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 H7C1W4 665 aa11.54□□□□□ -0.56
SRRM1-217ENST00000490543 USP2O75604 605 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms