RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 ZNF157P51786 506 aaPredicted RBP7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 ARID5AQ03989 594 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 PAK2Q13177 524 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 CEP135Q66GS9 1140 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 FAM35AQ86V20 835 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 VPS37DQ86XT2 251 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 MICALL1Q8N3F8 863 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 DHX38Q92620 1227 aaKnown RBP7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 PBX4Q9BYU1 374 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 RBSNQ9H1K0 784 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 PPM1HQ9ULR3 514 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 CLTCQ00610 1675 aaKnown RBP7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 UTRNP46939 3433 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 KIF14Q15058 1648 aa7.34□□□□□ -1.24
SSX2IP-208ENST00000490476 AFF2P51816 1311 aa7.33□□□□□ -1.24
SSX2IP-208ENST00000490476 A2ML1A8K2U0 1454 aa7.33□□□□□ -1.24
SSX2IP-208ENST00000490476 FAM181BA6NEQ2 426 aa7.33□□□□□ -1.24
SSX2IP-208ENST00000490476 NFKBIEO00221 500 aa7.33□□□□□ -1.24
SSX2IP-208ENST00000490476 CELA3AP09093 270 aa7.33□□□□□ -1.24
SSX2IP-208ENST00000490476 GMPRP36959 345 aa7.33□□□□□ -1.24
SSX2IP-208ENST00000490476 ZNF468Q5VIY5 522 aaPredicted RBP7.33□□□□□ -1.24
SSX2IP-208ENST00000490476 TMEM102Q8N9M5 508 aaPredicted RBP7.33□□□□□ -1.24
SSX2IP-208ENST00000490476 DNAJC2Q99543 621 aaKnown RBP7.33□□□□□ -1.24
SSX2IP-208ENST00000490476 GPN3Q9UHW5 284 aaPredicted RBP7.33□□□□□ -1.24
SSX2IP-208ENST00000490476 FGD6Q6ZV73 1430 aa7.33□□□□□ -1.24
SSX2IP-208ENST00000490476 ABCA6Q8N139 1617 aa7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 SMNDC1O75940 238 aaKnown RBP eCLIP7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 VSIG8P0DPA2 414 aa7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 MX2P20592 715 aa7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 MAP3K10Q02779 954 aa7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 PWP1Q13610 501 aa7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 PCSK7Q16549 785 aa7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 SV2BQ7L1I2 683 aa7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 POP1Q99575 1024 aaKnown RBP7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 SPON2Q9BUD6 331 aa7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 RSRP1Q9BUV0 290 aa7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 CEP44Q9C0F1 390 aa7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 BHLHE41Q9C0J9 482 aaPredicted RBP7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 TLR6Q9Y2C9 796 aa7.32□□□□□ -1.24
SSX2IP-208ENST00000490476 NPHP4O75161 1426 aaPredicted RBP7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 KIAA0825Q8IV33 1275 aa7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 GPRASP2Q96D09 838 aa7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 TMEM74Q96NL1 305 aa7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 LACRTQ9GZZ8 138 aa7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 MUC3BQ9H195 1237 aa7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 ZFYVE1Q9HBF4 777 aa7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 SEC31BQ9NQW1 1179 aa7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 ADAMTS1Q9UHI8 967 aa7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 SLC6A14Q9UN76 642 aa7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 ZC3H13Q5T200 1668 aaKnown RBP7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.31□□□□□ -1.24
SSX2IP-208ENST00000490476 MED14O60244 1454 aa7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 ERBB4Q15303 1308 aa7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 BLMP54132 1417 aaPredicted RBP7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 SIN3BO75182 1162 aa7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 ITPKAP23677 461 aa7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 EIF4A3P38919 411 aaKnown RBP7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 LIG3P49916 1009 aa7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 FAM160A1Q05DH4 1040 aa7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 ELMSAN1Q6PJG2 1045 aa7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 PLD4Q96BZ4 506 aa7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.3□□□□□ -1.248e-11■□□□□ 8.1
SSX2IP-208ENST00000490476 SMG9Q9H0W8 520 aaKnown RBP7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 ZNF576Q9H609 170 aa7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 ATP10BO94823 1461 aa7.3□□□□□ -1.24
SSX2IP-208ENST00000490476 ENC1O14682 589 aa7.29□□□□□ -1.24
SSX2IP-208ENST00000490476 PAGE1O75459 146 aa7.29□□□□□ -1.24
SSX2IP-208ENST00000490476 RLBP1P12271 317 aa7.29□□□□□ -1.24
SSX2IP-208ENST00000490476 LORP23490 312 aaPredicted RBP7.29□□□□□ -1.24
SSX2IP-208ENST00000490476 ADH7P40394 386 aa7.29□□□□□ -1.24
SSX2IP-208ENST00000490476 FAAP100Q0VG06 881 aa7.29□□□□□ -1.24
SSX2IP-208ENST00000490476 PERM1Q5SV97 790 aa7.29□□□□□ -1.24
SSX2IP-208ENST00000490476 ZSCAN1Q8NBB4 408 aa7.29□□□□□ -1.24
SSX2IP-208ENST00000490476 PHC3Q8NDX5 983 aa7.29□□□□□ -1.24
SSX2IP-208ENST00000490476 ZNF296Q8WUU4 475 aaPredicted RBP7.29□□□□□ -1.24
SSX2IP-208ENST00000490476 NECAB3Q96P71 396 aaPredicted RBP7.29□□□□□ -1.24
SSX2IP-208ENST00000490476 FAM177BA6PVY3 158 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 NEURL1BA8MQ27 555 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 PF4P02776 101 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 LMNB1P20700 586 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 ADH6P28332 368 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 CDC25BP30305 580 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 GJA8P48165 433 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 SNAP47Q5SQN1 464 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 TTBK2Q6IQ55 1244 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 GDF6Q6KF10 455 aaPredicted RBP7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 DEFB132Q7Z7B7 95 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 MCF2L2Q86YR7 1114 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 PMFBP1Q8TBY8 1022 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 NANOS1Q8WY41 292 aaKnown RBP7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 BSNDQ8WZ55 320 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 SH2B1Q9NRF2 756 aaPredicted RBP7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 KLF15Q9UIH9 416 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 NAGPAQ9UK23 515 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 TRIM33Q9UPN9 1127 aa7.28□□□□□ -1.24
SSX2IP-208ENST00000490476 KDM5DQ9BY66 1539 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 PTPRAP18433 802 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 ATF4P18848 351 aaPredicted RBP7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 PCDH1Q08174 1060 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 GAS6Q14393 721 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms